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Relion 5.0.0 aarch64 installation #1222

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AssmannG opened this issue Dec 12, 2024 · 0 comments
Open

Relion 5.0.0 aarch64 installation #1222

AssmannG opened this issue Dec 12, 2024 · 0 comments

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@AssmannG
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Dear All,

I am trying to build the latest stable release (5.0.0) on a GraceHopper aarch64 platform .
Unfortunately, building the conda environment fails with this error, whereas I can nicely install it on an A100 x64.

Error message:

× Preparing metadata (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> [22 lines of output]
      Traceback (most recent call last):
        File "/data/user/assman_g/miniconda_gh/envs/relio_gh/lib/python3.10/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in <module>
          main()
        File "/data/user/assman_g/miniconda_gh/envs/relio_gh/lib/python3.10/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main
          json_out['return_val'] = hook(**hook_input['kwargs'])
        File "/data/user/assman_g/miniconda_gh/envs/relio_gh/lib/python3.10/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 152, in prepare_metadata_for_build_wheel
          whl_basename = backend.build_wheel(metadata_directory, config_settings)
        File "/tmp/pip-build-env-d_a0l761/overlay/lib/python3.10/site-packages/sipbuild/api.py", line 28, in build_wheel
          project = AbstractProject.bootstrap('wheel',
        File "/tmp/pip-build-env-d_a0l761/overlay/lib/python3.10/site-packages/sipbuild/abstract_project.py", line 74, in bootstrap
          project.setup(pyproject, tool, tool_description)
        File "/tmp/pip-build-env-d_a0l761/overlay/lib/python3.10/site-packages/sipbuild/project.py", line 608, in setup
          self.apply_user_defaults(tool)
        File "/tmp/pip-install-uabihd7j/pyqt5_ddcdd5c52de345a5aecb330a7114c279/project.py", line 68, in apply_user_defaults
          super().apply_user_defaults(tool)
        File "/tmp/pip-build-env-d_a0l761/overlay/lib/python3.10/site-packages/pyqtbuild/project.py", line 51, in apply_user_defaults
          super().apply_user_defaults(tool)
        File "/tmp/pip-build-env-d_a0l761/overlay/lib/python3.10/site-packages/sipbuild/project.py", line 237, in apply_user_defaults
          self.builder.apply_user_defaults(tool)
        File "/tmp/pip-build-env-d_a0l761/overlay/lib/python3.10/site-packages/pyqtbuild/builder.py", line 49, in apply_user_defaults
          raise PyProjectOptionException('qmake',
      sipbuild.pyproject.PyProjectOptionException
      [end of output]
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed

× Encountered error while generating package metadata.
╰─> See above for output.

note: This is an issue with the package mentioned above, not pip.
hint: See above for details.

failed

CondaEnvException: Pip failed

Did anyone build relion on an aarch64 platform and if so, any suggestions for the changes for the environment.yaml file ? According to altendky/pyqt-tools#106 , it is related to PyQT5 ?

Any help appreciated!
Greta

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