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Number of SNPs in ABCD_release_2.0.1 bim file #14

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rskl92 opened this issue Apr 29, 2020 · 0 comments
Open

Number of SNPs in ABCD_release_2.0.1 bim file #14

rskl92 opened this issue Apr 29, 2020 · 0 comments

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@rskl92
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rskl92 commented Apr 29, 2020 •
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Hi,

In the read me in the ABCD release 2 folder, it says that there 527,285 SNPs after QC but when I check ABCD_release_2.0.1_r1 bim file it only has 517,724. I am planning to impute the genetic data for my analyses and just want to confirm I am starting with the correct file.

Thanks
@rskl92 rskl92 changed the title Number of SNPs in ABCD_release_2.0.1_r1.bim Number of SNPs in ABCD_release_2.0.1 bim file Apr 29, 2020
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