diff --git a/.devcontainer/devcontainer.json b/.devcontainer/devcontainer.json
index 484773c..5f850dc 100755
--- a/.devcontainer/devcontainer.json
+++ b/.devcontainer/devcontainer.json
@@ -52,10 +52,8 @@
     "customizations": {
         "vscode": {
             "settings": {
-                "[prettier]": {
-                    "prettierPath": "/usr/lib/node_modules/prettier"
-                },
-                "[python]": {
+                "prettier.prettierPath": "/usr/lib/node_modules/prettier",
+                "python": {
                     "analysis.exclude": [
                         "${containerWorkspaceFolder}/.dvc",
                         "${containerWorkspaceFolder}/.pytest_cache",
@@ -83,13 +81,7 @@
                     "terminal.focusAfterLaunch": true
                 }
             },
-            "extensions": [
-                "nf-neuro.nf-neuro-extensions",
-                "ms-python.autopep8",
-                "ms-python.vscode-pylance",
-                "mutantdino.resourcemonitor",
-                "KorbinianEckstein.niivue"
-            ]
+            "extensions": ["nf-neuro.nf-neuro-extensionpack"]
         }
     },
     "init": true,
diff --git a/.devcontainer/onCreateCommand.sh b/.devcontainer/onCreateCommand.sh
index feceffb..d1be1bd 100755
--- a/.devcontainer/onCreateCommand.sh
+++ b/.devcontainer/onCreateCommand.sh
@@ -3,7 +3,7 @@
 # Setup for NF-CORE
 
 npm install -g --save-dev --save-exact prettier
-npm install -g editorconfig
+npm install -g --save-dev editorconfig
 npm install -g --save-dev editorconfig-checker
 
 mkdir -p $XDG_CONFIG_HOME/nf-neuro
@@ -14,10 +14,3 @@ mkdir -p /nf-test/bin
 cd /nf-test/bin/
 curl -fsSL https://code.askimed.com/install/nf-test | bash -s ${NFTEST_VERSION}
 echo "PATH=$PATH:/nf-test/bin" >> ~/.bashrc
-
-
-# Setup for VSCODE Extensions Development
-
-npm install -g typescript
-npm install -g tslint
-npm install -g yo generator-code
diff --git a/.github/ISSUE_TEMPLATE/bug_report.md b/.github/ISSUE_TEMPLATE/bug_report.md
index a551d67..4a3415f 100755
--- a/.github/ISSUE_TEMPLATE/bug_report.md
+++ b/.github/ISSUE_TEMPLATE/bug_report.md
@@ -1,23 +1,24 @@
 ---
 name: Bug report
 about: Create a report to help us improve
-title: ''
+title: ""
 labels: bug
 assignees: AlexVCaron
-
 ---
 
 **System (complete the following information, else the issue will be closed):**
-  - OS: [e.g. Ubuntu, CentOS, other Linux distributions, MacOS, WSL, Windows, ...]
-  - Python version [e.g. 3.10, PyPa 3.7, CPython 3.9, ...]
-  - `nf-core` version [e.g. 1.0.0, 1.2.post3, 0.1.dev0, main, feat/awesome_module, ...]
-  - `nf-neuro` version [e.g. 1.0.0, 1.2.post3, 0.1.dev0, main, feat/awesome_module, ...]
+
+- OS: [e.g. Ubuntu, CentOS, other Linux distributions, MacOS, WSL, Windows, ...]
+- Python version [e.g. 3.10, PyPa 3.7, CPython 3.9, ...]
+- `nf-core` version [e.g. 1.0.0, 1.2.post3, 0.1.dev0, main, feat/awesome_module, ...]
+- `nf-neuro` version [e.g. 1.0.0, 1.2.post3, 0.1.dev0, main, feat/awesome_module, ...]
 
 **Describe the bug**
 A clear and concise description of what the bug is.
 
 **To Reproduce**
 Steps to reproduce the behavior:
+
 1. Go to '...'
 2. Click on '....'
 3. Scroll down to '....'
diff --git a/.github/ISSUE_TEMPLATE/feature_request.md b/.github/ISSUE_TEMPLATE/feature_request.md
index 025910a..b42166d 100755
--- a/.github/ISSUE_TEMPLATE/feature_request.md
+++ b/.github/ISSUE_TEMPLATE/feature_request.md
@@ -1,10 +1,9 @@
 ---
 name: Feature request
 about: Suggest an idea for this project
-title: ''
-labels: ''
-assignees: ''
-
+title: ""
+labels: ""
+assignees: ""
 ---
 
 **Is your feature request related to a problem?**
diff --git a/.github/ISSUE_TEMPLATE/usage_issue.md b/.github/ISSUE_TEMPLATE/usage_issue.md
index 4d31aff..3cc68ac 100755
--- a/.github/ISSUE_TEMPLATE/usage_issue.md
+++ b/.github/ISSUE_TEMPLATE/usage_issue.md
@@ -1,10 +1,9 @@
 ---
 name: Usage issue
 about: I have a problem using nf-neuro
-title: ''
-labels: ''
-assignees: ''
-
+title: ""
+labels: ""
+assignees: ""
 ---
 
 For now, `nf-neuro` is a closed community. Once we open to outside users and contributors, go to [Neurostars](https://neurostars.org/tag/nf-neuro) and post your common issue there. not here !
diff --git a/.github/reviewers.yml b/.github/reviewers.yml
index f3acc9e..42e877b 100644
--- a/.github/reviewers.yml
+++ b/.github/reviewers.yml
@@ -38,36 +38,36 @@ reviewers:
       - gagnonanthony
 
 files:
-  '**':
+  "**":
     - infrastructure-leads
     - repository-owners
-  'docs/**':
+  "docs/**":
     - documentation-leads
-  'LICENSE':
+  "LICENSE":
     - repository-owners
-  'CONTRIBUTING.md':
+  "CONTRIBUTING.md":
     - repository-owners
     - documentation-leads
-  '.devcontainer/**':
+  ".devcontainer/**":
     - infrastructure-leads
-  '.github/**':
+  ".github/**":
     - infrastructure-leads
-  '.github/ISSUE_TEMPLATE/**':
+  ".github/ISSUE_TEMPLATE/**":
     - infrastructure-leads
     - documentation-leads
-  '.github/PULL_REQUEST_TEMPLATE/**':
+  ".github/PULL_REQUEST_TEMPLATE/**":
     - infrastructure-leads
     - documentation-leads
-  '.github/pull_request_template.md':
+  ".github/pull_request_template.md":
     - infrastructure-leads
     - documentation-leads
-  '.vscode/**':
+  ".vscode/**":
     - infrastructure-leads
-  'tests/**':
+  "tests/**":
     - infrastructure-leads
-  'modules/nf-neuro/**':
+  "modules/nf-neuro/**":
     - guidelines-leads
-  'subworkflows/nf-neuro/**':
+  "subworkflows/nf-neuro/**":
     - guidelines-leads
 
 options:
diff --git a/.github/workflows/lint_component.yml b/.github/workflows/lint_component.yml
index 3b6d382..d7532c5 100644
--- a/.github/workflows/lint_component.yml
+++ b/.github/workflows/lint_component.yml
@@ -49,7 +49,7 @@ jobs:
       - uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5.2.0
         with:
           python-version: "3.11"
-          cache: 'poetry'
+          cache: "poetry"
       - uses: actions/setup-java@2dfa2011c5b2a0f1489bf9e433881c92c1631f88 # v4.3.0
         with:
           distribution: "temurin"
diff --git a/.github/workflows/run_checks_suite.yml b/.github/workflows/run_checks_suite.yml
index c3e18bf..e5d4486 100644
--- a/.github/workflows/run_checks_suite.yml
+++ b/.github/workflows/run_checks_suite.yml
@@ -25,7 +25,7 @@ jobs:
       - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
       - uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5.2.0
         with:
-          cache: 'pip'
+          cache: "pip"
       - uses: pre-commit/action@2c7b3805fd2a0fd8c1884dcaebf91fc102a13ecd # v3.0.1
         # FIXME Flip this off once we get to less than a couple hundred. Adding
         # this so it will only run against changed files. It'll make it much
@@ -40,7 +40,7 @@ jobs:
       - uses: actions/setup-node@1e60f620b9541d16bece96c5465dc8ee9832be0b # v4.0.3
         with:
           node-version: "20"
-          cache: 'npm'
+          cache: "npm"
 
       - name: Install Prettier
         run: npm ci
@@ -55,7 +55,7 @@ jobs:
       - uses: actions/setup-node@1e60f620b9541d16bece96c5465dc8ee9832be0b # v4.0.3
         with:
           node-version: "20"
-          cache: 'npm'
+          cache: "npm"
 
       - name: Install editorconfig-checker
         run: npm ci
@@ -101,9 +101,7 @@ jobs:
     strategy:
       fail-fast: false
       matrix:
-        module: [
-          "${{ fromJson(needs.nf-test-changes.outputs.modules) }}"
-        ]
+        module: ["${{ fromJson(needs.nf-test-changes.outputs.modules) }}"]
     uses: ./.github/workflows/lint_component.yml
     with:
       type: "module"
@@ -118,9 +116,7 @@ jobs:
     strategy:
       fail-fast: false
       matrix:
-        subworkflow: [
-          "${{ fromJson(needs.nf-test-changes.outputs.subworkflows) }}"
-        ]
+        subworkflow: ["${{ fromJson(needs.nf-test-changes.outputs.subworkflows) }}"]
     uses: ./.github/workflows/lint_component.yml
     with:
       type: "subworkflow"
@@ -135,7 +131,7 @@ jobs:
     strategy:
       fail-fast: false
       matrix:
-        path: [ "${{ fromJson(needs.nf-test-changes.outputs.paths) }}" ]
+        path: ["${{ fromJson(needs.nf-test-changes.outputs.paths) }}"]
         include:
           - profile: docker
           - runner: scilus-nf-neuro-runners
diff --git a/.github/workflows/test_component.yml b/.github/workflows/test_component.yml
index 0a78c6a..0548c25 100644
--- a/.github/workflows/test_component.yml
+++ b/.github/workflows/test_component.yml
@@ -9,14 +9,14 @@ on:
         type: string
       profile:
         description: "Which profile to use to run the component's tests"
-        default: 'docker'
+        default: "docker"
         type: choice
         options:
           - docker
           - singularity
       runner:
         description: "Runner label to use for the test run"
-        default: 'ubuntu-latest'
+        default: "ubuntu-latest"
         type: string
       nextflow_version:
         description: "Nextflow version to use"
@@ -39,11 +39,11 @@ on:
           Which profile to use to run the component's tests, either :
             - docker
             - singularity
-        default: 'docker'
+        default: "docker"
         type: string
       runner:
         description: "Runner label to use for the test run"
-        default: 'ubuntu-latest'
+        default: "ubuntu-latest"
         type: string
       nextflow_version:
         description: "Nextflow version to use"
@@ -78,7 +78,7 @@ jobs:
       - uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5.2.0
         with:
           python-version: "3.11"
-          cache: 'pip'
+          cache: "pip"
       - uses: actions/setup-java@2dfa2011c5b2a0f1489bf9e433881c92c1631f88 # v4.3.0
         with:
           distribution: "temurin"
diff --git a/.github/workflows/update_pr.yml b/.github/workflows/update_pr.yml
index 355e42f..cd60020 100644
--- a/.github/workflows/update_pr.yml
+++ b/.github/workflows/update_pr.yml
@@ -6,8 +6,7 @@ on:
   merge_group:
     types:
       - checks_requested
-    branches:
-      -main
+    branches: -main
 
 # Cancel if a newer run is started
 concurrency:
diff --git a/.prettierignore b/.prettierignore
index e88df16..5b6a506 100755
--- a/.prettierignore
+++ b/.prettierignore
@@ -1,7 +1,5 @@
 **/package-lock.json
 **/poetry.lock
-.devcontainer/
-.github/
 .nextflow/
 .nf-test/
 .pytest_cache/
diff --git a/.vscode/extension-package/CHANGELOG.md b/.vscode/extension-package/CHANGELOG.md
index 9f93ac9..a0c5478 100644
--- a/.vscode/extension-package/CHANGELOG.md
+++ b/.vscode/extension-package/CHANGELOG.md
@@ -1,17 +1,21 @@
 # Change Log
 
-## [Unreleased]
+## [1.0.1] - 2024-09-16
 
-## [0.0.1] - 2023-11-10
+- Upgrade extension list
 
-- Initial release
+## [1.0.0] - 2024-09-13
+
+- Add `Test Data TreeView` to the package
+- Move package under the `nf-neuro` namespace
+- Uniformize branding
 
 ## [0.0.2] - 2023-11-14
 
 - Add `Git Graph` to the package
 
-## [1.0.0] - 2024-09-13
+## [0.0.1] - 2023-11-10
 
-- Add `Test Data TreeView` to the package
-- Move package under the `nf-neuro` namespace
-- Uniformize branding
+- Initial release
+
+## [Unreleased]
diff --git a/.vscode/extension-package/LICENSE b/.vscode/extension-package/LICENSE
new file mode 100644
index 0000000..f288702
--- /dev/null
+++ b/.vscode/extension-package/LICENSE
@@ -0,0 +1,674 @@
+                    GNU GENERAL PUBLIC LICENSE
+                       Version 3, 29 June 2007
+
+ Copyright (C) 2007 Free Software Foundation, Inc. <https://fsf.org/>
+ Everyone is permitted to copy and distribute verbatim copies
+ of this license document, but changing it is not allowed.
+
+                            Preamble
+
+  The GNU General Public License is a free, copyleft license for
+software and other kinds of works.
+
+  The licenses for most software and other practical works are designed
+to take away your freedom to share and change the works.  By contrast,
+the GNU General Public License is intended to guarantee your freedom to
+share and change all versions of a program--to make sure it remains free
+software for all its users.  We, the Free Software Foundation, use the
+GNU General Public License for most of our software; it applies also to
+any other work released this way by its authors.  You can apply it to
+your programs, too.
+
+  When we speak of free software, we are referring to freedom, not
+price.  Our General Public Licenses are designed to make sure that you
+have the freedom to distribute copies of free software (and charge for
+them if you wish), that you receive source code or can get it if you
+want it, that you can change the software or use pieces of it in new
+free programs, and that you know you can do these things.
+
+  To protect your rights, we need to prevent others from denying you
+these rights or asking you to surrender the rights.  Therefore, you have
+certain responsibilities if you distribute copies of the software, or if
+you modify it: responsibilities to respect the freedom of others.
+
+  For example, if you distribute copies of such a program, whether
+gratis or for a fee, you must pass on to the recipients the same
+freedoms that you received.  You must make sure that they, too, receive
+or can get the source code.  And you must show them these terms so they
+know their rights.
+
+  Developers that use the GNU GPL protect your rights with two steps:
+(1) assert copyright on the software, and (2) offer you this License
+giving you legal permission to copy, distribute and/or modify it.
+
+  For the developers' and authors' protection, the GPL clearly explains
+that there is no warranty for this free software.  For both users' and
+authors' sake, the GPL requires that modified versions be marked as
+changed, so that their problems will not be attributed erroneously to
+authors of previous versions.
+
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+
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+
+  The precise terms and conditions for copying, distribution and
+modification follow.
+
+                       TERMS AND CONDITIONS
+
+  0. Definitions.
+
+  "This License" refers to version 3 of the GNU General Public License.
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+  7. Additional Terms.
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+  "Additional permissions" are terms that supplement the terms of this
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+Additional permissions that are applicable to the entire Program shall
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+  When you convey a copy of a covered work, you may at your option
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+  All other non-permissive additional terms are considered "further
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+a further restriction but permits relicensing or conveying under this
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+  Additional terms, permissive or non-permissive, may be stated in the
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+  You may not propagate or modify a covered work except as expressly
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+this License (including any patent licenses granted under the third
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+reinstated permanently if the copyright holder notifies you of the
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+  Termination of your rights under this section does not terminate the
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+  9. Acceptance Not Required for Having Copies.
+
+  You are not required to accept this License in order to receive or
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+occurring solely as a consequence of using peer-to-peer transmission
+to receive a copy likewise does not require acceptance.  However,
+nothing other than this License grants you permission to propagate or
+modify any covered work.  These actions infringe copyright if you do
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+covered work, you indicate your acceptance of this License to do so.
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+  10. Automatic Licensing of Downstream Recipients.
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+  Each time you convey a covered work, the recipient automatically
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+propagate that work, subject to this License.  You are not responsible
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+  An "entity transaction" is a transaction transferring control of an
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+any patent claim is infringed by making, using, selling, offering for
+sale, or importing the Program or any portion of it.
+
+  11. Patents.
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+  A "contributor" is a copyright holder who authorizes use under this
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+
+  A contributor's "essential patent claims" are all patent claims
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+hereafter acquired, that would be infringed by some manner, permitted
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+but do not include claims that would be infringed only as a
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+
+  Each contributor grants you a non-exclusive, worldwide, royalty-free
+patent license under the contributor's essential patent claims, to
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+  In the following three paragraphs, a "patent license" is any express
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+sue for patent infringement).  To "grant" such a patent license to a
+party means to make such an agreement or commitment not to enforce a
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+  If you convey a covered work, knowingly relying on a patent license,
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+then you must either (1) cause the Corresponding Source to be so
+available, or (2) arrange to deprive yourself of the benefit of the
+patent license for this particular work, or (3) arrange, in a manner
+consistent with the requirements of this License, to extend the patent
+license to downstream recipients.  "Knowingly relying" means you have
+actual knowledge that, but for the patent license, your conveying the
+covered work in a country, or your recipient's use of the covered work
+in a country, would infringe one or more identifiable patents in that
+country that you have reason to believe are valid.
+
+  If, pursuant to or in connection with a single transaction or
+arrangement, you convey, or propagate by procuring conveyance of, a
+covered work, and grant a patent license to some of the parties
+receiving the covered work authorizing them to use, propagate, modify
+or convey a specific copy of the covered work, then the patent license
+you grant is automatically extended to all recipients of the covered
+work and works based on it.
+
+  A patent license is "discriminatory" if it does not include within
+the scope of its coverage, prohibits the exercise of, or is
+conditioned on the non-exercise of one or more of the rights that are
+specifically granted under this License.  You may not convey a covered
+work if you are a party to an arrangement with a third party that is
+in the business of distributing software, under which you make payment
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+the work, and under which the third party grants, to any of the
+parties who would receive the covered work from you, a discriminatory
+patent license (a) in connection with copies of the covered work
+conveyed by you (or copies made from those copies), or (b) primarily
+for and in connection with specific products or compilations that
+contain the covered work, unless you entered into that arrangement,
+or that patent license was granted, prior to 28 March 2007.
+
+  Nothing in this License shall be construed as excluding or limiting
+any implied license or other defenses to infringement that may
+otherwise be available to you under applicable patent law.
+
+  12. No Surrender of Others' Freedom.
+
+  If conditions are imposed on you (whether by court order, agreement or
+otherwise) that contradict the conditions of this License, they do not
+excuse you from the conditions of this License.  If you cannot convey a
+covered work so as to satisfy simultaneously your obligations under this
+License and any other pertinent obligations, then as a consequence you may
+not convey it at all.  For example, if you agree to terms that obligate you
+to collect a royalty for further conveying from those to whom you convey
+the Program, the only way you could satisfy both those terms and this
+License would be to refrain entirely from conveying the Program.
+
+  13. Use with the GNU Affero General Public License.
+
+  Notwithstanding any other provision of this License, you have
+permission to link or combine any covered work with a work licensed
+under version 3 of the GNU Affero General Public License into a single
+combined work, and to convey the resulting work.  The terms of this
+License will continue to apply to the part which is the covered work,
+but the special requirements of the GNU Affero General Public License,
+section 13, concerning interaction through a network will apply to the
+combination as such.
+
+  14. Revised Versions of this License.
+
+  The Free Software Foundation may publish revised and/or new versions of
+the GNU General Public License from time to time.  Such new versions will
+be similar in spirit to the present version, but may differ in detail to
+address new problems or concerns.
+
+  Each version is given a distinguishing version number.  If the
+Program specifies that a certain numbered version of the GNU General
+Public License "or any later version" applies to it, you have the
+option of following the terms and conditions either of that numbered
+version or of any later version published by the Free Software
+Foundation.  If the Program does not specify a version number of the
+GNU General Public License, you may choose any version ever published
+by the Free Software Foundation.
+
+  If the Program specifies that a proxy can decide which future
+versions of the GNU General Public License can be used, that proxy's
+public statement of acceptance of a version permanently authorizes you
+to choose that version for the Program.
+
+  Later license versions may give you additional or different
+permissions.  However, no additional obligations are imposed on any
+author or copyright holder as a result of your choosing to follow a
+later version.
+
+  15. Disclaimer of Warranty.
+
+  THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY
+APPLICABLE LAW.  EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT
+HOLDERS AND/OR OTHER PARTIES PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY
+OF ANY KIND, EITHER EXPRESSED OR IMPLIED, INCLUDING, BUT NOT LIMITED TO,
+THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
+PURPOSE.  THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE PROGRAM
+IS WITH YOU.  SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF
+ALL NECESSARY SERVICING, REPAIR OR CORRECTION.
+
+  16. Limitation of Liability.
+
+  IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING
+WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MODIFIES AND/OR CONVEYS
+THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY
+GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE
+USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF
+DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD
+PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS),
+EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF
+SUCH DAMAGES.
+
+  17. Interpretation of Sections 15 and 16.
+
+  If the disclaimer of warranty and limitation of liability provided
+above cannot be given local legal effect according to their terms,
+reviewing courts shall apply local law that most closely approximates
+an absolute waiver of all civil liability in connection with the
+Program, unless a warranty or assumption of liability accompanies a
+copy of the Program in return for a fee.
+
+                     END OF TERMS AND CONDITIONS
+
+            How to Apply These Terms to Your New Programs
+
+  If you develop a new program, and you want it to be of the greatest
+possible use to the public, the best way to achieve this is to make it
+free software which everyone can redistribute and change under these terms.
+
+  To do so, attach the following notices to the program.  It is safest
+to attach them to the start of each source file to most effectively
+state the exclusion of warranty; and each file should have at least
+the "copyright" line and a pointer to where the full notice is found.
+
+    <one line to give the program's name and a brief idea of what it does.>
+    Copyright (C) <year>  <name of author>
+
+    This program is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    This program is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <https://www.gnu.org/licenses/>.
+
+Also add information on how to contact you by electronic and paper mail.
+
+  If the program does terminal interaction, make it output a short
+notice like this when it starts in an interactive mode:
+
+    <program>  Copyright (C) <year>  <name of author>
+    This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
+    This is free software, and you are welcome to redistribute it
+    under certain conditions; type `show c' for details.
+
+The hypothetical commands `show w' and `show c' should show the appropriate
+parts of the General Public License.  Of course, your program's commands
+might be different; for a GUI interface, you would use an "about box".
+
+  You should also get your employer (if you work as a programmer) or school,
+if any, to sign a "copyright disclaimer" for the program, if necessary.
+For more information on this, and how to apply and follow the GNU GPL, see
+<https://www.gnu.org/licenses/>.
+
+  The GNU General Public License does not permit incorporating your program
+into proprietary programs.  If your program is a subroutine library, you
+may consider it more useful to permit linking proprietary applications with
+the library.  If this is what you want to do, use the GNU Lesser General
+Public License instead of this License.  But first, please read
+<https://www.gnu.org/licenses/why-not-lgpl.html>.
diff --git a/.vscode/extension-package/package.json b/.vscode/extension-package/package.json
index 69d6b1e..2e35a9b 100644
--- a/.vscode/extension-package/package.json
+++ b/.vscode/extension-package/package.json
@@ -7,7 +7,7 @@
         "url": "https://github.com/scilus/nf-neuro.git"
     },
     "icon": "icon.avif",
-    "version": "1.0.0",
+    "version": "1.0.1",
     "publisher": "nf-neuro",
     "engines": {
         "vscode": "^1.84.0"
@@ -16,45 +16,41 @@
         "Extension Packs"
     ],
     "extensionPack": [
-        "bierner.github-markdown-preview",
-        "bierner.markdown-checkbox",
         "bierner.markdown-emoji",
         "bierner.markdown-footnotes",
-        "bierner.markdown-mermaid",
         "bierner.markdown-preview-github-styles",
-        "bierner.markdown-yaml-preamble",
+        "christian-kohler.npm-intellisense",
+        "connor4312.esbuild-problem-matchers",
+        "dbaeumer.vscode-eslint",
+        "KorbinianEckstein.niivue",
+        "letmaik.git-tree-compare",
+        "lextudio.restructuredtext",
         "github.vscode-github-actions",
         "GitHub.vscode-pull-request-github",
         "mhutchie.git-graph",
+        "moshfeu.compare-folders",
         "ms-azuretools.vscode-docker",
+        "ms-python.autopep8",
         "ms-python.isort",
         "ms-python.python",
         "ms-python.vscode-pylance",
-        "ms-vscode-remote.remote-containers",
-        "ms-vscode-remote.remote-ssh",
-        "ms-vscode-remote.remote-ssh-edit",
-        "ms-vscode-remote.remote-wsl",
-        "ms-vscode-remote.vscode-remote-extensionpack",
-        "ms-vscode.cmake-tools",
-        "ms-vscode.cpptools",
         "ms-vscode.cpptools-extension-pack",
-        "ms-vscode.cpptools-themes",
+        "ms-vscode.extension-test-runner",
         "ms-vscode.makefile-tools",
         "ms-vscode.remote-explorer",
         "ms-vscode.remote-server",
+        "ms-vscode-remote.remote-ssh-edit",
+        "ms-vscode-remote.vscode-remote-extensionpack",
         "ms-vsliveshare.vsliveshare",
+        "mutantdino.resourcemonitor",
+        "nextflow.nextflow",
         "nf-core.nf-core-extensionpack",
+        "nf-neuro.test-data-treeview",
+        "onnovalkering.vscode-singularity",
+        "ryu1kn.annotator",
+        "trond-snekvik.simple-rst",
         "twxs.cmake",
         "yahyabatulu.vscode-markdown-alert",
-        "yzhang.markdown-all-in-one",
-        "onnovalkering.vscode-singularity",
-        "nextflow.nextflow",
-        "KorbinianEckstein.niivue",
-        "mutantdino.resourcemonitor",
-        "christian-kohler.npm-intellisense",
-        "dbaeumer.vscode-eslint",
-        "connor4312.esbuild-problem-matchers",
-        "ms-vscode.extension-test-runner",
-        "nf-neuro.test-data-treeview"
+        "yzhang.markdown-all-in-one"
     ]
 }
diff --git a/.vscode/launch.json b/.vscode/launch.json
deleted file mode 100644
index b5be941..0000000
--- a/.vscode/launch.json
+++ /dev/null
@@ -1,15 +0,0 @@
-// A launch configuration that launches the extension inside a new window
-// Use IntelliSense to learn about possible attributes.
-// Hover to view descriptions of existing attributes.
-// For more information, visit: https://go.microsoft.com/fwlink/?linkid=830387
-{
-    "version": "0.2.0",
-    "configurations": [
-        {
-            "name": "Extension",
-            "type": "extensionHost",
-            "request": "launch",
-            "args": ["--extensionDevelopmentPath=${workspaceFolder}/.vscode/extension-package"]
-        }
-    ]
-}
diff --git a/.vscode/settings.json b/.vscode/settings.json
index f94b2a6..0d7d883 100755
--- a/.vscode/settings.json
+++ b/.vscode/settings.json
@@ -13,5 +13,11 @@
     "git.allowForcePush": true,
     "git.branchProtection": ["main"],
     "git.branchProtectionPrompt": "alwaysPrompt",
-    "github.branchProtection": true
+    "github.branchProtection": true,
+    "testDataExplorer.repository": "scilus/nf-neuro",
+    "testDataExplorer.branch": "main",
+    "testDataExplorer.dataserver": "scil.usherbrooke.ca",
+    "testDataExplorer.serverdatalocation": "scil_test_data/dvc-store/files/md5",
+    "testDataExplorer.localListingLocation": "tests/test_data.json",
+    "testDataExplorer.remoteListingLocation": "tests/test_data.json"
 }
diff --git a/package-lock.json b/package-lock.json
index e7cee31..831dcc8 100644
--- a/package-lock.json
+++ b/package-lock.json
@@ -1,43 +1,43 @@
 {
-  "name": "nf-neuro",
-  "lockfileVersion": 3,
-  "requires": true,
-  "packages": {
-    "": {
-      "dependencies": {
-        "editorconfig-checker": "^5.1.8",
-        "prettier": "^3.1.0"
-      }
-    },
-    "node_modules/editorconfig-checker": {
-      "version": "5.1.8",
-      "resolved": "https://registry.npmjs.org/editorconfig-checker/-/editorconfig-checker-5.1.8.tgz",
-      "integrity": "sha512-GM/qCbXA8GajSqqjXiWZN49i0nizQV5PjkVKIwWB9rtsm/pztjnBC+4dts5wW2KdrP2zyMPEltWHtWQwoCadqg==",
-      "bin": {
-        "ec": "dist/index.js",
-        "editorconfig-checker": "dist/index.js"
-      },
-      "engines": {
-        "node": ">=18.0.0"
-      },
-      "funding": {
-        "type": "buymeacoffee",
-        "url": "https://www.buymeacoffee.com/mstruebing"
-      }
-    },
-    "node_modules/prettier": {
-      "version": "3.1.0",
-      "resolved": "https://registry.npmjs.org/prettier/-/prettier-3.1.0.tgz",
-      "integrity": "sha512-TQLvXjq5IAibjh8EpBIkNKxO749UEWABoiIZehEPiY4GNpVdhaFKqSTu+QrlU6D2dPAfubRmtJTi4K4YkQ5eXw==",
-      "bin": {
-        "prettier": "bin/prettier.cjs"
-      },
-      "engines": {
-        "node": ">=14"
-      },
-      "funding": {
-        "url": "https://github.com/prettier/prettier?sponsor=1"
-      }
+    "name": "nf-neuro",
+    "lockfileVersion": 3,
+    "requires": true,
+    "packages": {
+        "": {
+            "dependencies": {
+                "editorconfig-checker": "^5.1.8",
+                "prettier": "^3.1.0"
+            }
+        },
+        "node_modules/editorconfig-checker": {
+            "version": "5.1.8",
+            "resolved": "https://registry.npmjs.org/editorconfig-checker/-/editorconfig-checker-5.1.8.tgz",
+            "integrity": "sha512-GM/qCbXA8GajSqqjXiWZN49i0nizQV5PjkVKIwWB9rtsm/pztjnBC+4dts5wW2KdrP2zyMPEltWHtWQwoCadqg==",
+            "bin": {
+                "ec": "dist/index.js",
+                "editorconfig-checker": "dist/index.js"
+            },
+            "engines": {
+                "node": ">=18.0.0"
+            },
+            "funding": {
+                "type": "buymeacoffee",
+                "url": "https://www.buymeacoffee.com/mstruebing"
+            }
+        },
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     }
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 }