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Implement TM-score fill-in for missing data relative to inputs #50

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mezarque opened this issue Sep 19, 2023 · 1 comment
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Implement TM-score fill-in for missing data relative to inputs #50

mezarque opened this issue Sep 19, 2023 · 1 comment
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enhancement New feature or request good first issue Good for newcomers invalid This doesn't seem right

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@mezarque
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Because of Foldseek's evalue-based filtering of TM-scores, we often get masking of actually high TM-scores as 0. We should, for input proteins, calculate the TM-score explicitly for all of the missing data, perhaps using something like tmscoring or tmtools.
@mezarque mezarque added enhancement New feature or request good first issue Good for newcomers invalid This doesn't seem right labels Sep 19, 2023
@mezarque
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This will be implemented once #86 is merged, thanks to @AtanasDRadkov!

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enhancement New feature or request good first issue Good for newcomers invalid This doesn't seem right
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