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CHANGELOG.md

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Changelog

0.6.5

  • Added a new attribute settings to LifImage which contains useful capture settings (Thanks to PR from @tmtenbrink).

0.6.4

  • Fixed bug and incompatibility in 0.6.3.
  • Added preliminary fix for images captured with stage navigator.

0.6.3

  • Added support for updated LasX with additional data in the LIF file.
  • Changed the way file names are assigned, now includes folder path. This fix is intended to clarify imaging sets with many duplicate names.

0.6.2

  • Fixed bug where the time and image scale were calculated incorrectly.
  • Clarified scaling documentation.

0.6.1

  • Update readme.

0.6.0

  • Added support for non-XY images with get_plane(). See docs for usage. Note: Reading arbitrary planes (i.e. an XZ plane of an XY image) is not yet supported.

0.5.2

  • Bugfix: Fix error in mosaic parsing. PosX metadata was incorrectly read from PosY.

0.5.1

  • Bugfix: switch from io.BufferedIOBase to io.IOBase.

0.5.0

  • Added support for loading files from buffers (thanks to PR from @JacksonMaxfield).

0.4.1

  • Fixed critical documentaiton error: LifImage.scale is in px/µm, not px/nm for X and Y dimensions.

0.4.0

  • Added support for tiled images:
    • m was added as a new dimension (for tiled images).
    • LifImage changes:
      • New get_iter_m() function.
      • New mosaic_position attribute with (FieldX, FieldY, PosX, PosY).
  • Under the hood changes:
    • LifImage.dims is now a named tuple for clearer code.
  • Other changes:
    • Prettier outputs for repr().
    • Switch to github CI.

0.3.1

  • Added error message for tiled images, pending feature addition.

0.3.0

  • Added support for 16-bit images, increased minimum Pillow version to 7.2.0.
    • New LifImage attribute bit_depth is a tuple of intigers descibing the bit depth for each channel in the image.
    • Thanks to @DirkRemmers for providing the example file.
  • Changed type from str to int for dims and channels in the info dictionary.
  • Added python 3.9 to build testing.

0.2.1

  • Fixed ZeroDivisionError when the Z-dimension is defined, but has a length of 0.
  • Clarified an error message.
  • Added fix for truncated files.

0.2.0

  • LifImage.scale now returns px/nm conversions.

0.1.1

  • Style changes.

0.1.0

  • Initial release.