From b32bd600f0f326c66ab221ebe2433aca1bd40370 Mon Sep 17 00:00:00 2001 From: Patrick Capon <137233925+PatCapon39@users.noreply.github.com> Date: Thu, 13 Jun 2024 17:12:39 +1000 Subject: [PATCH 1/4] Update index.md --- index.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/index.md b/index.md index 0d7050e..ff337d0 100644 --- a/index.md +++ b/index.md @@ -5,7 +5,7 @@ datatable: true --- -This page lists bioinformatics tools and software that are installed across several of the [**BioCommons infrastructure partner systems**](https://support.biocommons.org.au/support/solutions/articles/6000251977-compute-systems-at-the-biocommons-partner-infrastructures). Tool / software status on other infrastructure partner systems will be added over time. Note: `NCI (if89)` in the table refers to the [Australian BioCommons Tools and Workflows repository](https://australianbiocommons.github.io/ables/if89/), located in project allocation `if89` at the [National Computational Infrastructure (NCI)](https://nci.org.au/). +This page lists bioinformatics tools and software that are installed across several of the [**BioCommons infrastructure partner systems**](https://support.biocommons.org.au/support/solutions/articles/6000251977-compute-systems-at-the-biocommons-partner-infrastructures). Tool / software status on other infrastructure partner systems will be added over time. Note: `NCI (if89)` in the table refers to the [Australian BioCommons Leadership Share (ABLeS) Tools and Workflows repository](https://australianbiocommons.github.io/ables/if89/), located in project allocation `if89` at the [National Computational Infrastructure (NCI)](https://nci.org.au/).
From bdf62c5fa65f18dc658811facbf64a7292f510b9 Mon Sep 17 00:00:00 2001 From: Patrick Capon <137233925+PatCapon39@users.noreply.github.com> Date: Thu, 13 Jun 2024 17:14:57 +1000 Subject: [PATCH 2/4] Update README.md --- README.md | 10 ++-------- 1 file changed, 2 insertions(+), 8 deletions(-) diff --git a/README.md b/README.md index 0800d6b..cfa966d 100644 --- a/README.md +++ b/README.md @@ -1,12 +1,6 @@ -## About -Please see the [How-to Guide for the template](https://australianbiocommons.github.io/how-to-guide-template/) for more information on how to get started. +## Acknowledgements - -## Acknowledgements for the guides - -This work is supported by the [Australian BioCommons](https://www.biocommons.org.au/) via funding from [Bioplatforms Australia](https://bioplatforms.com/), the Australian Research Data Commons (https://doi.org/10.47486/PL105) and the Queensland Government RICF programme. Bioplatforms Australia and the Australian Research Data Commons are funded by the National Collaborative Research Infrastructure Strategy (NCRIS). +This work is supported by the [Australian BioCommons](https://www.biocommons.org.au/) via funding from [Bioplatforms Australia](https://bioplatforms.com/) and the Queensland Government RICF programme. Bioplatforms Australia is funded by the National Collaborative Research Infrastructure Strategy (NCRIS). This repository makes use of the ELIXIR toolkit theme: [![theme badge](https://img.shields.io/badge/ELIXIR%20toolkit%20theme-jekyll-blue?color=0d6efd)](https://github.com/ELIXIR-Belgium/elixir-toolkit-theme) - -This template is based on the [ELIXIR Toolkit Theme example](https://github.com/ELIXIR-Belgium/elixir-toolkit-theme-example). From 5a438cb9d92baa340a474cfa1aa404f2a54a6c40 Mon Sep 17 00:00:00 2001 From: Patrick Capon <137233925+PatCapon39@users.noreply.github.com> Date: Thu, 13 Jun 2024 17:16:36 +1000 Subject: [PATCH 3/4] Update about.md --- pages/about.md | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/pages/about.md b/pages/about.md index 7684595..5bf379a 100644 --- a/pages/about.md +++ b/pages/about.md @@ -8,7 +8,7 @@ toc: true ## About -The purpose of ToolFinder is to present a landscape view of bioinformatics software packages & tools +ToolFinder's purpose is to present a landscape view of bioinformatics software packages & tools installed across Australian national computational infrastructures, including: - {% tool "gadi" %} and {% tool "nci-if89-new-tool" %} at the [National Computational Infrastructure](https://nci.org.au/) (NCI) @@ -58,12 +58,13 @@ This resource would not be possible without the following contributors. ### Acknowledgements +This work is supported by the [Australian BioCommons](https://www.biocommons.org.au/) via funding from [Bioplatforms Australia](https://bioplatforms.com/) and the Queensland Government Research Infrastructure Co-investment Fund (RICF) programme. Bioplatforms Australia is funded by the National Collaborative Research Infrastructure Strategy (NCRIS). -This guide makes use of the [ELIXIR toolkit theme](https://github.com/ELIXIR-Belgium/elixir-toolkit-theme) +ToolFinder makes use of the [ELIXIR toolkit theme](https://github.com/ELIXIR-Belgium/elixir-toolkit-theme) {% include image.html file="elixir-toolkit-theme_logo.svg" alt="Elixir Toolkit Theme logo" max-width="15em" %} -This work is supported by the [Australian BioCommons](https://www.biocommons.org.au/) via funding from [Bioplatforms Australia](https://bioplatforms.com/), the [Australian Research Data Commons](https://doi.org/10.47486/PL105) and the Queensland Government Research Infrastructure Co-investment Fund (RICF) programme. Bioplatforms Australia and the Australian Research Data Commons are funded by the National Collaborative Research Infrastructure Strategy (NCRIS). + ### References From 44168d4da4a59a842608184f9daf67c07d75f8a9 Mon Sep 17 00:00:00 2001 From: Patrick Capon <137233925+PatCapon39@users.noreply.github.com> Date: Fri, 14 Jun 2024 11:15:44 +1000 Subject: [PATCH 4/4] Update tool_and_resource_list.yml Correct QRIScloud spelling --- _data/tool_and_resource_list.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/_data/tool_and_resource_list.yml b/_data/tool_and_resource_list.yml index d0107b0..26b55ad 100644 --- a/_data/tool_and_resource_list.yml +++ b/_data/tool_and_resource_list.yml @@ -43,9 +43,9 @@ url: https://support.pawsey.org.au/portal/servicedesk/customer/user/login?destination=portals name: Pawsey Supercomputing Centre (Pawsey) - id: rcc-new-tool - description: Request a tool for QRIS-Cloud / UQ-RCC by completing a tool install request at the link below. + description: Request a tool for QRIScloud / UQ-RCC by completing a tool install request at the link below. url: https://support.qcif.edu.au/Request-for-installation-of-QRIScloud-HPC - name: QRIS-Cloud / UQ-RCC + name: QRIScloud / UQ-RCC - id: bunya description: Supercomputer located at the University of Queensland.