dsp_core_config.yml

Meta:
  description: Core input config for collecting info about project and data sharing plan.
Inputs:
  dspCoreVersion:
    name: dspCoreVersion
    type: hidden
    value: "[DSP_Core_Version_Apr_2022]"
    form: dsp
  datasetTable:
    id: datasetTable
    name: datasetTable
    type: table-inputs
    add: Yes
    inputs:
      - name: depositLabel
        display: Label
        type: text
        form: dsp
        title: provide label to be used as repository dataset name
        placeholder: e.g. "Sequencing of Cohort1"
      - name: depositAssay
        display: Assay
        type: fill
        schema: https://raw.githubusercontent.com/mc2-center/data-models/main/mc2.model.jsonld
        range: bts:DatasetAssay
        sort: true
        form: dsp
        title: select specific assay used
        class: compact
        list: assayList
      - name: dataFormat
        display: Format
        type: fill
        schema: https://raw.githubusercontent.com/mc2-center/data-models/main/mc2.model.jsonld
        range: bts:DatasetFileFormats
        sort: true
        form: dsp
        title: select file format of data
        class: compact
        list: formatList
      - name: depositSamples
        display: Sample count
        type: number
        form: dsp
        size: 6
        title: number of samples associated with dataset
      - name: depositSpecies
        display: Species
        type: fill
        schema: https://raw.githubusercontent.com/mc2-center/data-models/main/mc2.model.jsonld
        range: bts:DatasetSpecies
        title: species sampled in assay
        form: dsp
        class: compact
        list: speciesList
      - name: depositDatabase
        display: Data repository
        type: text
        form: dsp
        title: Storage repository for the dataset
      - name: depositDeadline
        display: Planned upload date
        type: date
        form: dsp
        title: when the data is expected to be completely deposited
  toolTable:
    id: toolTable
    name: toolTable
    type: table-inputs
    add: Yes
    inputs:
      - name: toolLabel
        display: Tool name
        type: text
        form: dsp
        title: provide a name for the tool to be shared
        placeholder: e.g. "New tool"
      - name: toolOperation
        display: Tool function
        type: fill
        schema: https://raw.githubusercontent.com/mc2-center/data-models/main/mc2.model.jsonld
        range: bts:ToolOperation
        sort: true
        form: dsp
        title: provide a term to describe to the tool usage
        class: compact
        list: toolOpList
      - name: toolType
        display: Type
        type: fill
        schema: https://raw.githubusercontent.com/mc2-center/data-models/main/mc2.model.jsonld
        range: bts:ToolType
        sort: true
        form: dsp
        title: select the type of implementation for the tool
        class: compact
        list: typeList
      - name: toolTopic
        display: Topic
        type: fill
        schema: https://raw.githubusercontent.com/mc2-center/data-models/main/mc2.model.jsonld
        range: bts:ToolTopic
        sort: true
        form: dsp
        title: select the research topic the tool is used in
        class: compact
        list: topicList
      - name: depositDeadline
        display: Planned upload date
        type: date
        form: dsp
        title: when the data is expected to be completely deposited
  modelTable:
    id: modelTable
    name: modelTable
    type: table-inputs
    add: Yes
    inputs:
      - name: depositLabel
        display: Label
        type: text
        form: dsp
        title: provide label to be used as the model name
        placeholder: e.g. "Experimental model 1"
      - name: modelClass
        display: Class
        type: select
        options: ['', 'Device','Organism', 'Xenograft', 'Organoid']
        title: broad class to describe the model
        form: dsp
        class: compact
      - name: modelSpecies
        display: Species
        type: select-schema
        schema: https://raw.githubusercontent.com/mc2-center/data-models/main/mc2.model.jsonld
        range: bts:DatasetSpecies
        title: species the biological model is based in
        form: dsp
        class: compact
      - name: modelTumor
        display: Tumor
        type: select-schema
        schema: https://raw.githubusercontent.com/mc2-center/data-models/main/mc2.model.jsonld
        range: bts:DatasetTumorType
        title: tumor type the system is intended to model
        form: dsp
        class: compact
      - name: depositDeadline
        display: Planned date available
        type: date
        form: dsp
        title: when the resource is expected to be ready for reuse
  projectTitle:
    name: projectTitle
    id: projectTitle
    type: text
    size: 50
    form: dsp
  projectDescription:
    name: projectDescription
    type: textarea
    class: wide-textarea
    form: dsp
  projectGrantId:
     name: grantId
     type: select-schema
     schema: https://raw.githubusercontent.com/mc2-center/data-models/main/mc2.model.jsonld
     range: bts:ProjectGrantNumber
     multiple: true
     title: Number of grant associated with resources
     form: dsp
     class: compact
  projectPI:
    name: projectPI
    type: text
    form: dsp
  projectPIEmail:
    name: projectPIEmail
    type: email
    form: dsp
  projectPOC:
    name: projectPOC
    type: text
    form: dsp
  projectPOCEmail:
    name: projectPOCEmail
    type: email
    form: dsp
  projectSynPrincipals:
    name: projectSynPrincipals
    type: text
    form: dsp
    title: comma-separated for multiple Ids
  projectInstitution:
    name: projectInstitution
    type: text
    form: dsp
  projectEndDate:
    name: projectEndDate
    type: date
    form: dsp
  sharingRestriction:
    name: sharingRestriction
    type: textarea
    form: dsp
  filledDate:
    name: filledDate
    id: filled-date
    type: date
    form: dsp
  submit:
    form: dsp
    action: https://submit-form.com/NZmGhAd3