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Consider using Cram or Bam adjustments to cut down on filesize #29

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Gurado opened this issue Feb 7, 2014 · 0 comments
Open

Consider using Cram or Bam adjustments to cut down on filesize #29

Gurado opened this issue Feb 7, 2014 · 0 comments
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@Gurado
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Gurado commented Feb 7, 2014

There is several possibilities to reduce the footprint of bam files that we should consider as an option in the mapping mods.

http://blastedbio.blogspot.com.au/2012/03/bam-verus-cram-07.html

Alternatively / additional the cram tools may be interesting depending on its use with subsequent mods.
http://www.ebi.ac.uk/ena/about/cram_usage

@BauerLab BauerLab modified the milestones: Version 0.5.0, 0.6.0 Oct 23, 2014
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