From df7b62b65dc7453d061f4d48ddadbb1548fdd68e Mon Sep 17 00:00:00 2001
From: edisj <ejakupov@asu.edu>
Date: Fri, 26 Jul 2024 06:44:18 -0700
Subject: [PATCH] add start stop step

---
 mdaadb/analysis.py | 15 +++++++++++++--
 1 file changed, 13 insertions(+), 2 deletions(-)

diff --git a/mdaadb/analysis.py b/mdaadb/analysis.py
index 0213bd4..f1f0978 100644
--- a/mdaadb/analysis.py
+++ b/mdaadb/analysis.py
@@ -88,7 +88,16 @@ def _get_universe(self, simID: int) -> mda.Universe:
 
         return universe
 
-    def run(self, simID: int, **kwargs: dict) -> None:
+    def run(
+        self,
+        simID: int,
+        start=None,
+        stop=None,
+        step=None,
+        frames=None,
+        verbose=None,
+        **kwargs: dict
+    ) -> None:
         """Run the analysis for a simulation given by `simID`.
 
         Parameters
@@ -108,7 +117,9 @@ def run(self, simID: int, **kwargs: dict) -> None:
         if self.hooks["pre_run"] is not None:
             self.hooks["pre_run"](self.db, simID)
 
-        self._analysis.run()
+        self._analysis.run(
+            start=start, stop=stop, step=step, frames=frames, verbose=verbose
+        )
 
         if self.hooks["post_run"] is not None:
             self.hooks["post_run"](self.db, simID)