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while loop got eof error #60

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junjunlab opened this issue May 9, 2023 · 1 comment

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junjunlab commented May 9, 2023

Hi, I run XAM follow your code with while loop but I got an eof error:

And I change to for loop it works fine:

How should I solve it,thanks!

kescobo added the question label

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CiaranOMara commented Jul 30, 2023

We've got a test case for the while loop that is passing. So, I'm surprised the while loop is not working for you.

@junjunlab, I have got a few questions.

Can you share your sam file so I can reproduce the error?
Could you also let us know which version of BGZFStreams and XAM with which you encountered the error?
And finally, are you using multiple threads?

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