v0.3.4

• hg38_rRNA_masked_plus_rRNA_plus_viruses_plus_ERCC references created (source:Sarah)
• wrapper script now echos git commit and tag

v0.3.3

• BSJ bam is split into viral and human bams
• split BSJ bams are also saved as bigwigs

v0.3.2

Turning ciri, annotation and aggregation back on ... it was turned off for optimizing BSJ bam generation.
DO NOT use v0.3.0 or v0.3.1... Use this instead.

v0.3.1

Significant speed improvement in chimeric bam file generation using filter_bam_by_readids.py

v0.3.0

• Lookup table for hg38 to hg19 circRNA annotations is updated... this eliminate one-to-many hits from the previous version
• BSJs extracted as different bam file.
• v0.1.0 flowchart created on lucidchart
• adding slurmjobid to log/err file names

v0.1.0

• Identifies circular RNAs using CircExplorer and CIRI.
• Only works on NIH's biowulf cluster. Will need modifications to work on other HPC environments.