delete-me.yaml

name: Doc testing

on:
  workflow_call:
  workflow_dispatch:
  push:
    branches:
      - fix-doc-workflow

# Run all tests before making a release
jobs:
  # Create updated container docs for the latest release
  list-containers:
    uses: ./.github/workflows/listContainers.yaml
  generate-and-update-container-docs:
    needs:
      - list-containers
    permissions:
      contents: write
    runs-on: ubuntu-latest
    services:
      test-db:
        image: postgres:13-alpine3.16
        env:
          POSTGRES_PASSWORD: pw
          POSTGRES_DB: testdb
          POSTGRES_USER: postgres
        # Set health checks to wait until postgres has started
        options: >-
          --health-cmd pg_isready
          --health-interval 10s
          --health-timeout 5s
          --health-retries 5
          --name testdb
        ports:
          - 5432:5432
    strategy:
      matrix:
        container: ${{fromJson(needs.list-containers.outputs.containers)}}
    steps:
      - uses: actions/checkout@v3
        with:
          fetch-depth: '0'
          ref: 1.1.1.1

      - name: Update Container Documenation
        env:
          MPI_DBNAME: testdb
          MPI_PASSWORD: pw
          MPI_DB_TYPE: postgres
          MPI_HOST: localhost
          MPI_USER: postgres
          MPI_PORT: 5432
          MPI_PATIENT_TABLE: patient
          MPI_PERSON_TABLE: person
        run: |
          CONTAINER=${{ matrix.container }}
          cd $GITHUB_WORKSPACE/containers/$CONTAINER
          cp $GITHUB_WORKSPACE/utils/make_openapi_json.py .
          pip install -r requirements.txt
          python make_openapi_json.py
          npx @redocly/cli build-docs $GITHUB_WORKSPACE/docs/1.1.1.1/containers/$CONTAINER.html openapi.json

      - uses: actions/upload-artifact@v3
        with:
          name: container-docs
          path: ./docs/1.1.1.1/containers

  commit-docs:
    needs:
      - tag-release
      - generate-and-update-phdi-docs
      - generate-and-update-container-docs
    permissions:
      contents: write
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v3
        with:
          ref: docs

      - name: Download container docs from artifacts
        uses: actions/download-artifact@v2
        with:
          name: container-docs
          path: ./docs/1.1.1.1/containers

      - name: Copy to latest folder
        run: |
          rm -rf ./docs/latest
          mkdir -p ./docs/latest/sdk
          mkdir -p ./docs/latest/containers
          cp -r ./docs/1.1.1.1/sdk/* ./docs/latest/sdk
          cp -r ./docs/1.1.1.1/containers/* ./docs/latest/containers

      - name: Commit New Documentation
        uses: EndBug/add-and-commit@v9
        with:
          add: docs
          message: Automated update of docs for 1.1.1.1 release.