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New GDSCTools version 1.1 #182

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cokelaer opened this issue Oct 18, 2021 · 0 comments
Open
7 tasks done

New GDSCTools version 1.1 #182

cokelaer opened this issue Oct 18, 2021 · 0 comments
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@cokelaer @Donnyvdm

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@cokelaer
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cokelaer commented Oct 18, 2021 •
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The current version of gdsctools is out-dated. Let us move on to a new version wit the following improvements. The development is currently done in the dev branch :

  • deprecation warnings (np.bool, scipy.arange, scipy.argsort, scipy.zeros_like).
  • CI action
  • get rid of biokit dependencies (only an import for now that is withitn the Extra class
  • remove pinned version on statsmodels, pandas, etc
  • add the missing openxl
  • allow cosmid ID to be strings
  • fix easydev warning / deprecated
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@Donnyvdm Donnyvdm

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@cokelaer @Donnyvdm