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Baits absent while they are present #8

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timdiels opened this issue Oct 24, 2020 · 1 comment
Open

Baits absent while they are present #8

timdiels opened this issue Oct 24, 2020 · 1 comment
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@timdiels
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In GitLab by @timdiels on Apr 3, 2019, 16:39

Oren has baits which are present in the matrix, but yet coexpnetviz says they're absent. I've saved the files on my machine as coexpr_cases/1.

@timdiels timdiels added the bug Something isn't working label Oct 24, 2020
@timdiels timdiels self-assigned this Oct 24, 2020
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In GitLab by @timdiels on Apr 3, 2019, 17:42

The error:

  W: Correlation sample of ExpressionMatrix('A.solani_DMG_avg.txt') contains
  more than 10% NaN values, specifically 640000 values out of a sample matrix
  of 639200 values are NaN

His file had trailing tabs, but removing them did not help. Further, 640000 > 639200 makes no sense, 639200 should be the max!

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