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brain radius should be an adjustable option, not a hard-coded one #3

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ericearl opened this issue Apr 2, 2020 · 0 comments
Open

brain radius should be an adjustable option, not a hard-coded one #3

ericearl opened this issue Apr 2, 2020 · 0 comments
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enhancement New feature or request good first issue Good for newcomers

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@ericearl
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ericearl commented Apr 2, 2020

brain_radius is currently hard-coded in here:

https://github.com/DCAN-Labs/nhp-abcd-bids-pipeline/blob/master/app/pipelines.py#L82-L102

It needs to be an external command-line interface argparse option, much like dcan_bold_processing does it here:

https://github.com/DCAN-Labs/dcan_bold_processing/blob/master/dcan_bold_proc.py#L169-L172
@ericearl ericearl added enhancement New feature or request good first issue Good for newcomers labels Apr 2, 2020
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