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Add a check for empty files Nonetype upon diamond alignment #98

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Darcy220606 opened this issue Jun 23, 2024 · 1 comment

Owner

Darcy220606 commented Jun 23, 2024

At the moment ampcombi crashes when no hits where found upon the step of merging the hit summary to teh diamond because of empty files.

Collaborator

jasmezz commented Jul 5, 2024 •

edited

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I think this is the related error message:

We are getting this for a nf-core/funcscan test with preannotated data (no hits found in sample 1), which causes the pipeline to crash 😢

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