From 0e801cbef1dc29f781da7f6b83362a7644c23b5e Mon Sep 17 00:00:00 2001 From: ningbioinfo Date: Tue, 13 Aug 2024 01:14:34 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20DavisLab?= =?UTF-8?q?oratory/hoodscanR@e46652888af343876018c6bcb32b122ce5e0c202=20?= =?UTF-8?q?=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- 404.html | 65 +- LICENSE-text.html | 56 +- articles/Quick_start.html | 120 +- articles/index.html | 54 +- authors.html | 71 +- deps/bootstrap-5.3.1/bootstrap.min.css | 2 +- deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js | 5 + deps/clipboard.js-2.0.11/clipboard.min.js | 7 + deps/data-deps.txt | 9 + deps/font-awesome-6.4.2/css/all.css | 7968 +++++++++++++++++ deps/font-awesome-6.4.2/css/all.min.css | 9 + deps/font-awesome-6.4.2/css/v4-shims.css | 2194 +++++ deps/font-awesome-6.4.2/css/v4-shims.min.css | 6 + .../webfonts/fa-brands-400.ttf | Bin 0 -> 189684 bytes .../webfonts/fa-brands-400.woff2 | Bin 0 -> 109808 bytes .../webfonts/fa-regular-400.ttf | Bin 0 -> 63348 bytes .../webfonts/fa-regular-400.woff2 | Bin 0 -> 24488 bytes .../webfonts/fa-solid-900.ttf | Bin 0 -> 394668 bytes .../webfonts/fa-solid-900.woff2 | Bin 0 -> 150020 bytes .../webfonts/fa-v4compatibility.ttf | Bin 0 -> 10172 bytes .../webfonts/fa-v4compatibility.woff2 | Bin 0 -> 4568 bytes deps/headroom-0.11.0/headroom.min.js | 7 + deps/headroom-0.11.0/jQuery.headroom.min.js | 7 + deps/search-1.0.0/autocomplete.jquery.min.js | 7 + deps/search-1.0.0/fuse.min.js | 9 + deps/search-1.0.0/mark.min.js | 7 + index.html | 62 +- katex-auto.js | 14 + lightswitch.js | 85 + news/index.html | 58 +- pkgdown.js | 2 - pkgdown.yml | 5 +- reference/calcMetrics.html | 80 +- .../clustByHood,SpatialExperiment-method.html | 8 + reference/clustByHood,matrix-method.html | 8 + reference/clustByHood.html | 84 +- reference/findNearCells.html | 76 +- reference/hoodscanR-package.html | 66 +- reference/hoodscanR.html | 8 + reference/index.html | 129 +- reference/mergeByGroup.html | 68 +- reference/mergeHoodSpe.html | 70 +- reference/perplexityPermute.html | 117 + .../plotColocal,SpatialExperiment-method.html | 8 + reference/plotColocal,matrix-method.html | 8 + reference/plotColocal.html | 88 +- .../plotHoodMat,SpatialExperiment-method.html | 8 + reference/plotHoodMat,matrix-method.html | 8 + reference/plotHoodMat-1.png | Bin 148704 -> 151888 bytes reference/plotHoodMat.html | 88 +- ...plotProbDist,SpatialExperiment-method.html | 8 + reference/plotProbDist,matrix-method.html | 8 + reference/plotProbDist.html | 84 +- reference/plotTissue.html | 82 +- reference/readHoodData.html | 74 +- reference/scanHoods.html | 74 +- reference/spe.html | 8 + reference/spe_test.html | 66 +- search.json | 2 +- sitemap.xml | 89 +- 60 files changed, 11223 insertions(+), 1023 deletions(-) create mode 100644 deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js create mode 100644 deps/clipboard.js-2.0.11/clipboard.min.js create mode 100644 deps/font-awesome-6.4.2/css/all.css create mode 100644 deps/font-awesome-6.4.2/css/all.min.css create mode 100644 deps/font-awesome-6.4.2/css/v4-shims.css create mode 100644 deps/font-awesome-6.4.2/css/v4-shims.min.css create mode 100644 deps/font-awesome-6.4.2/webfonts/fa-brands-400.ttf create mode 100644 deps/font-awesome-6.4.2/webfonts/fa-brands-400.woff2 create mode 100644 deps/font-awesome-6.4.2/webfonts/fa-regular-400.ttf create mode 100644 deps/font-awesome-6.4.2/webfonts/fa-regular-400.woff2 create mode 100644 deps/font-awesome-6.4.2/webfonts/fa-solid-900.ttf create mode 100644 deps/font-awesome-6.4.2/webfonts/fa-solid-900.woff2 create mode 100644 deps/font-awesome-6.4.2/webfonts/fa-v4compatibility.ttf create mode 100644 deps/font-awesome-6.4.2/webfonts/fa-v4compatibility.woff2 create mode 100644 deps/headroom-0.11.0/headroom.min.js create mode 100644 deps/headroom-0.11.0/jQuery.headroom.min.js create mode 100644 deps/search-1.0.0/autocomplete.jquery.min.js create mode 100644 deps/search-1.0.0/fuse.min.js create mode 100644 deps/search-1.0.0/mark.min.js create mode 100644 katex-auto.js create mode 100644 lightswitch.js create mode 100644 reference/clustByHood,SpatialExperiment-method.html create mode 100644 reference/clustByHood,matrix-method.html create mode 100644 reference/hoodscanR.html create mode 100644 reference/perplexityPermute.html create mode 100644 reference/plotColocal,SpatialExperiment-method.html create mode 100644 reference/plotColocal,matrix-method.html create mode 100644 reference/plotHoodMat,SpatialExperiment-method.html create mode 100644 reference/plotHoodMat,matrix-method.html create mode 100644 reference/plotProbDist,SpatialExperiment-method.html create mode 100644 reference/plotProbDist,matrix-method.html create mode 100644 reference/spe.html diff --git a/404.html b/404.html index 0ca6030..d61ec4e 100644 --- a/404.html +++ b/404.html @@ -8,65 +8,52 @@ Page not found (404) • hoodscanR - - - - + + + Skip to contents - -