From d51413236acae088cdd7c5ebb90f5bf6526ac77c Mon Sep 17 00:00:00 2001 From: Zoe May Pendlington Date: Wed, 10 Jan 2024 09:15:37 +0000 Subject: [PATCH] Added single cell library construction for #2158 --- src/ontology/efo-edit.owl | 11 ++++++++++- 1 file changed, 10 insertions(+), 1 deletion(-) diff --git a/src/ontology/efo-edit.owl b/src/ontology/efo-edit.owl index 9a5e571a..d14c6c34 100644 --- a/src/ontology/efo-edit.owl +++ b/src/ontology/efo-edit.owl @@ -16873,6 +16873,7 @@ Declaration(Class(efo:EFO_0022486)) Declaration(Class(efo:EFO_0022487)) Declaration(Class(efo:EFO_0022488)) Declaration(Class(efo:EFO_0022489)) +Declaration(Class(efo:EFO_0022490)) Declaration(Class(efo:EFO_0030000)) Declaration(Class(efo:EFO_0030001)) Declaration(Class(efo:EFO_0030002)) @@ -29297,7 +29298,7 @@ AnnotationAssertion(rdfs:label obo:RO_0001025 "located_in") AnnotationAssertion(rdfs:label obo:RO_0002104 "has_plasma_membrane_part") -# Object Property: obo:RO_0002160 (only_in_taxon) +# Object Property: obo:RO_0002160 (only in taxon) AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:20973947") obo:IAO_0000115 obo:RO_0002160 "S only_in_taxon T iff: S SubClassOf in_taxon only T") AnnotationAssertion(oboInOwl:hasDbXref obo:RO_0002160 "RO:0002160") @@ -202394,6 +202395,14 @@ AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0022489 "CHITD") AnnotationAssertion(rdfs:label efo:EFO_0022489 "chitotriosidase deficiency"@en) SubClassOf(efo:EFO_0022489 efo:EFO_0000508) +# Class: efo:EFO_0022490 (ScaleBio single cell RNA sequencing) + +AnnotationAssertion(Annotation(efo:definition_citation "https://scale.bio/wp-content/uploads/2023/06/ScaleBio_Poster_scRNA-scATAC.pdf") obo:IAO_0000115 efo:EFO_0022490 "ScaleBio technology that utilizes a plate-based approach with combinatorial indexing to generate single cell libraries.") +AnnotationAssertion(dc:creator efo:EFO_0022490 "Zoe May Pendlington") +AnnotationAssertion(dc:date efo:EFO_0022490 "2024-01-10T09:12:40Z"^^xsd:dateTime) +AnnotationAssertion(rdfs:label efo:EFO_0022490 "ScaleBio single cell RNA sequencing"@en) +SubClassOf(efo:EFO_0022490 efo:EFO_0010183) + # Class: efo:EFO_0030000 (STARmap) AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:29930089") Annotation(oboInOwl:hasDbXref "https://orcid.org/0000-0002-3090-9894") obo:IAO_0000115 efo:EFO_0030000 "STARmap is an image-based technology for 3D intact-tissue RNA sequencing, which integrates hydrogel-tissue chemistry, targeted signal amplification, and in situ sequencing.")