diff --git a/src/ontology/efo-edit.owl b/src/ontology/efo-edit.owl index a2c68af1..929353c3 100644 --- a/src/ontology/efo-edit.owl +++ b/src/ontology/efo-edit.owl @@ -28915,7 +28915,7 @@ AnnotationAssertion(rdfs:label obo:RO_0001025 "located_in") AnnotationAssertion(rdfs:label obo:RO_0002104 "has_plasma_membrane_part") -# Object Property: obo:RO_0002160 (only_in_taxon) +# Object Property: obo:RO_0002160 (only in taxon) AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:20973947") obo:IAO_0000115 obo:RO_0002160 "S only_in_taxon T iff: S SubClassOf in_taxon only T") AnnotationAssertion(oboInOwl:hasDbXref obo:RO_0002160 "RO:0002160") @@ -125416,14 +125416,18 @@ AnnotationAssertion(rdfs:label efo:EFO_0005191 "waist height ratio") SubClassOf(efo:EFO_0005191 efo:EFO_0004324) SubClassOf(efo:EFO_0005191 efo:EFO_0007861) -# Class: efo:EFO_0005192 (red blood cell distribution width) +# Class: efo:EFO_0005192 (obsolete_red blood cell distribution width) AnnotationAssertion(obo:IAO_0000115 efo:EFO_0005192 "measure of the variation of red blood cell (RBC) volume") AnnotationAssertion(obo:IAO_0000117 efo:EFO_0005192 "Dani Welter") +AnnotationAssertion(obo:IAO_0100001 efo:EFO_0005192 "http://www.ebi.ac.uk/efo/EFO_0009188") AnnotationAssertion(efo:definition_citation efo:EFO_0005192 "erthrocyte distribution width") AnnotationAssertion(efo:definition_citation efo:EFO_0005192 "https://en.wikipedia.org/wiki/Red_blood_cell_distribution_width") +AnnotationAssertion(efo:obsoleted_in_version efo:EFO_0005192 "3.58.0") +AnnotationAssertion(efo:reason_for_obsolescence efo:EFO_0005192 "Duplication") AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0005192 "RDW") -AnnotationAssertion(rdfs:label efo:EFO_0005192 "red blood cell distribution width") +AnnotationAssertion(rdfs:label efo:EFO_0005192 "obsolete_red blood cell distribution width") +AnnotationAssertion(owl:deprecated efo:EFO_0005192 "true"^^xsd:boolean) SubClassOf(efo:EFO_0005192 efo:EFO_0004503) SubClassOf(efo:EFO_0005192 ObjectUnionOf(ObjectSomeValuesFrom(obo:IAO_0000136 obo:MP_0001914) ObjectSomeValuesFrom(obo:IAO_0000136 efo:EFO_0000734) ObjectSomeValuesFrom(obo:IAO_0000136 efo:EFO_0004272))) diff --git a/src/ontology/reports/obsolete_gwas.tsv b/src/ontology/reports/obsolete_gwas.tsv index 268c9f62..460d1e72 100644 --- a/src/ontology/reports/obsolete_gwas.tsv +++ b/src/ontology/reports/obsolete_gwas.tsv @@ -6,6 +6,7 @@ "http://purl.obolibrary.org/obo/MONDO_0005041" "http://purl.obolibrary.org/obo/MONDO_0007915" "http://purl.obolibrary.org/obo/MONDO_0005351" + "http://www.ebi.ac.uk/efo/EFO_0009188" "http://purl.obolibrary.org/obo/MONDO_0005575" "http://purl.obolibrary.org/obo/MONDO_0006715" "http://purl.obolibrary.org/obo/MONDO_0002039" diff --git a/src/ontology/reports/obsoletes.tsv b/src/ontology/reports/obsoletes.tsv index 050c00c6..b28d1679 100644 --- a/src/ontology/reports/obsoletes.tsv +++ b/src/ontology/reports/obsoletes.tsv @@ -98,6 +98,7 @@ "MONDO:0100352" + "MONDO:0800025" "MONDO:0800025" "MONDO:0600009" "MONDO:0600010" @@ -144,6 +145,7 @@ "MONDO:0800043" "MONDO:0100344" + "MONDO:0800448" "MONDO:0800028" "MONDO:0031446" "MONDO:0020783" @@ -1664,6 +1666,7 @@ "http://purl.obolibrary.org/obo/UBERON_6001767" "http://purl.obolibrary.org/obo/FBbt_00001768" "http://purl.obolibrary.org/obo/PO_0025022" + "http://www.ebi.ac.uk/efo/EFO_0009188" "http://purl.obolibrary.org/obo/MONDO_0005475" "http://purl.obolibrary.org/obo/MONDO_0100431" "http://www.ebi.ac.uk/efo/EFO_0002338"