From c25e4b11c4175b5c8488591758d353c1caf05bc0 Mon Sep 17 00:00:00 2001 From: Christopher Wyatt Date: Thu, 11 Apr 2024 11:01:39 +0100 Subject: [PATCH] RSQLite added to container --- biomart_perl/Dockerfile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/biomart_perl/Dockerfile b/biomart_perl/Dockerfile index d7555c3..ab14756 100644 --- a/biomart_perl/Dockerfile +++ b/biomart_perl/Dockerfile @@ -4,7 +4,7 @@ RUN apt-get update && \ apt-get install -y procps perl libcurl4-openssl-dev libssl-dev libxml2-dev && \ apt-get clean -y && rm -rf /var/lib/apt/lists/* -RUN Rscript -e "install.packages('BiocManager')" +RUN Rscript -e "install.packages(c('BiocManager', 'RSQLite')" RUN Rscript -e "BiocManager::install('biomaRt')"