pyproject.toml

[tool.poetry]
name = "gtdblib"
version = "1.10.1"
license = "GPL-3.0-or-later"
description = "An abstraction of objects, files, and third-party tools used by the GTDB. Not intended for public use."
authors = [
    "Aaron Mussig <aaronmussig@gmail.com>",
    "Pierre Chaumeil <p.chaumeil@uq.edu.au>",
    "Donovan Parks <donovan.parks@gmail.com>"
]
readme = "README.md"
homepage = "https://github.com/Ecogenomics/gtdb-lib"
repository = "https://github.com/Ecogenomics/gtdb-lib"
documentation = "https://ecogenomics.github.io/gtdb-lib/"
classifiers = [
    "Development Status :: 1 - Planning",
    "Intended Audience :: Developers",
    "License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)",
    "Natural Language :: English",
    "Operating System :: OS Independent",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.7",
    "Programming Language :: Python :: 3.8",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "Topic :: Software Development :: Libraries :: Python Modules",
]
packages = [{ include = "gtdblib" }]

[tool.poetry.scripts]
gtdblib = 'gtdblib.__main__:main'

[tool.poetry.urls]
"Bug Tracker" = "https://github.com/Ecogenomics/gtdb-lib/issues"

[tool.poetry.dependencies]
python = ">=3.7,<4.0.0"
numpy = ">=1.9.0"
tqdm = ">=4.35.0"
typer = { version = ">=0.7.0", extras = ["all"] }
dendropy = ">=4.4.0"
pyyaml = "^6.0"
sqlalchemy = "^2.0.9"
psycopg2-binary = "^2.9.6"

sphinx = { version = "^5.2.0", optional = true }
sphinx-rtd-theme = { version = "^1.0.0", optional = true }

[tool.poetry.extras]
docs = ["sphinx", "sphinx-rtd-theme"]

[build-system]
requires = ["poetry-core>=1.0.0"]
build-backend = "poetry.core.masonry.api"