From 01eef652025c58400016b597efa5442a847bdf4b Mon Sep 17 00:00:00 2001 From: mohitchandarana <44833060+mohitchandarana@users.noreply.github.com> Date: Thu, 25 Mar 2021 12:09:02 -0400 Subject: [PATCH] Updated the docker run commands Updated the docker run commands in the README to use the artifact provided by the Dockerfile instead of invoking the python module. (med2img.py -> med2img) --- README.rst | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/README.rst b/README.rst index 5b38dc9..a1ae745 100644 --- a/README.rst +++ b/README.rst @@ -124,7 +124,7 @@ Run the docker image ``fnndsc/pl-med2img`` using the following command to conver docker run --rm \ -v $(pwd)/SAG-anon-nii/:/incoming \ -v $(pwd)/image-results-nii/:/outgoing \ - fnndsc/pl-med2img med2img.py \ + fnndsc/pl-med2img med2img \ -i SAG-anon.nii \ -o sample.png \ /incoming /outgoing @@ -138,7 +138,7 @@ Run the docker image ``fnndsc/pl-med2img`` using the following command to conver docker run --rm \ -v $(pwd)/SAG-anon/:/incoming \ -v $(pwd)/image-results-dcm/:/outgoing \ - fnndsc/pl-med2img med2img.py \ + fnndsc/pl-med2img med2img \ -i 0001-1.3.12.2.1107.5.2.19.45152.2013030808110258929186035.dcm \ -o sample.png \ /incoming /outgoing