From eca016a244f2160abcd82ce43cde739f02ccdca9 Mon Sep 17 00:00:00 2001 From: Scott Chamberlain Date: Thu, 9 Jan 2025 14:15:48 -0800 Subject: [PATCH] explicitly sync dependencies on gh actions for womtool and test run --- .github/workflows/cromwell-test-run.yml | 3 +++ .github/workflows/womtools-validate.yml | 3 +++ 2 files changed, 6 insertions(+) diff --git a/.github/workflows/cromwell-test-run.yml b/.github/workflows/cromwell-test-run.yml index 72e2146..8c70590 100644 --- a/.github/workflows/cromwell-test-run.yml +++ b/.github/workflows/cromwell-test-run.yml @@ -50,6 +50,9 @@ jobs: - name: Set up Python run: uv python install 3.13 + - name: Install dependencies + run: uv sync --all-extras + - name: Execute Test Run of WDL Workflows env: CROMWELL_PATH: cromwell-86.jar diff --git a/.github/workflows/womtools-validate.yml b/.github/workflows/womtools-validate.yml index 6376b1d..2e1400b 100644 --- a/.github/workflows/womtools-validate.yml +++ b/.github/workflows/womtools-validate.yml @@ -49,6 +49,9 @@ jobs: - name: Set up Python run: uv python install 3.13 + - name: Install dependencies + run: uv sync --all-extras + - name: Validate WDL Scripts env: WOMTOOL_PATH: womtool-86.jar