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Papermill not found, need to add path #92

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dfeldell opened this issue Mar 5, 2020 · 3 comments
Open

Papermill not found, need to add path #92

dfeldell opened this issue Mar 5, 2020 · 3 comments
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@dfeldell
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dfeldell commented Mar 5, 2020

The script doesn't work without path for Papermill since ~1 week on Deeplearning VMs. Need to add (for example) /opt/conda/bin/ on GCP machines.

/opt/conda/bin/papermill "${INPUT_NOTEBOOK_PATH}" "${TMP_NOTEBOOK_PATH}" --log-output

@gogasca
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gogasca commented Mar 16, 2020

@dfeldell Thanks for reporting, will take a look and update.

@gogasca gogasca added the bug label Mar 16, 2020
@gogasca
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gogasca commented Mar 31, 2020

@dfeldell Would you mind submitting the PR that fixes this issue?

@DanReia
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DanReia commented Apr 28, 2021

It appears that the virtual environment is not active when the startup script is run. You can source it manually in the script:

source /opt/conda/bin/activate

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