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I was wondering, do you think there is a simple way to get the sequence on reference genome of each STR detected by EHDN ? In order to build a vcf file.
Thanks a lot for your help,
Kind regards,
Marine
The text was updated successfully, but these errors were encountered:
Thank you for the question. Someone in our team is working towards adding this functionality to the future versions of the program. Also, one of our collaborators created a script to annotate reference coordinates of expanded repeats detected by EHdn. If you'd like, I can reach out to them and ask if they would be willing to share their script?
Hi !
I was wondering, do you think there is a simple way to get the sequence on reference genome of each STR detected by EHDN ? In order to build a vcf file.
Thanks a lot for your help,
Kind regards,
Marine
The text was updated successfully, but these errors were encountered: