From 023ef099e3a21ac4fd1468cc2871ce39631a98e8 Mon Sep 17 00:00:00 2001 From: Insaynoah <74536546+Insaynoah@users.noreply.github.com> Date: Tue, 4 Jun 2024 14:06:56 +0300 Subject: [PATCH] rmd file fix --- vignettes/miaViz.Rmd | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/vignettes/miaViz.Rmd b/vignettes/miaViz.Rmd index 8fc6a52a..f43b4ba9 100644 --- a/vignettes/miaViz.Rmd +++ b/vignettes/miaViz.Rmd @@ -46,11 +46,11 @@ data(GlobalPatterns, package = "mia") # Abundance plotting -in contrast to other fields of sequencing based fields of research for which +In contrast to other fields of sequencing based fields of research for which expression of genes is usually studied, microbiome research uses the more term ~Abundance~ to described the numeric data measured and analyzed. Technically, especially in context of `SummarizedExperiment` objects, there is -no difference. Therefore `plotExpression` can be used to plot `Abundance` data.. +no difference. Therefore `plotExpression` can be used to plot `Abundance` data of a particular feature. ```{r} plotExpression(GlobalPatterns,