diff --git a/examples/integrations/itk/ThinPlateSpline.ipynb b/examples/integrations/itk/ThinPlateSpline.ipynb
index 5af3a8c0..3ea7f1c1 100644
--- a/examples/integrations/itk/ThinPlateSpline.ipynb
+++ b/examples/integrations/itk/ThinPlateSpline.ipynb
@@ -21,7 +21,7 @@
"source": [
"import sys, os\n",
"\n",
- "!{sys.executable} -m pip install -q \"itk>=5.3.0\" \"itkwidgets[all]>=1.0a21\""
+ "!{sys.executable} -m pip install -q tqdm pooch \"itk>=5.3.0\" \"itkwidgets[all]>=1.0a21\""
]
},
{
@@ -29,15 +29,7 @@
"execution_count": 2,
"id": "67df7916-4a81-4880-b575-f65dfab17bd5",
"metadata": {},
- "outputs": [
- {
- "name": "stderr",
- "output_type": "stream",
- "text": [
- "CUDA initialization: CUDA unknown error - this may be due to an incorrectly set up environment, e.g. changing env variable CUDA_VISIBLE_DEVICES after program start. Setting the available devices to be zero. (Triggered internally at ../c10/cuda/CUDAFunctions.cpp:109.)\n"
- ]
- }
- ],
+ "outputs": [],
"source": [
"import itk\n",
"import pooch\n",
@@ -47,22 +39,22 @@
},
{
"cell_type": "code",
- "execution_count": 3,
+ "execution_count": 6,
"id": "dca03164-73f6-41fb-abd2-bb9b76f2fa74",
"metadata": {},
"outputs": [],
"source": [
"# Download data\n",
"files = pooch.retrieve(\n",
- " url='https://examples.itk.org/src/core/transform/deformavolumewithathinplatespline/DeformAVolumeWithAThinPlateSpline.zip',\n",
- " known_hash='sha256:f01ea2e7fc91cc8e832397e46b18d2b62b74de306a5ba7a4d441837aaeea7e8d',\n",
+ " url='https://bafybeidii6e4zhuswkhw7tm3dalmfw5yt4mja5yf3gb7t4jur3rdgdecve.ipfs.w3s.link/ipfs/bafybeidii6e4zhuswkhw7tm3dalmfw5yt4mja5yf3gb7t4jur3rdgdecve/DeformAVolumeWithAThinPlateSpline.zip',\n",
+ " known_hash='sha256:d267f9216d11c3f953b3a2601f38d1434ab97c17834dca0ad1b3ff558226c9c1',\n",
" processor=pooch.Unzip(), path=\"./\", fname=\"ThinPlateSpline\", progressbar=True)\n",
"file_path = os.path.commonpath(files)"
]
},
{
"cell_type": "code",
- "execution_count": 4,
+ "execution_count": 7,
"id": "53b5b965-497e-46b7-8c14-d157ff5fed4f",
"metadata": {},
"outputs": [],
@@ -76,7 +68,7 @@
},
{
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- "execution_count": 5,
+ "execution_count": 8,
"id": "2b3e6002-73f1-4971-8d43-b4a20681635b",
"metadata": {},
"outputs": [],
@@ -87,7 +79,7 @@
},
{
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- "execution_count": 6,
+ "execution_count": 9,
"id": "f9bcdbb3-6140-4a0e-b654-446438761356",
"metadata": {},
"outputs": [],
@@ -102,7 +94,7 @@
},
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- "execution_count": 7,
+ "execution_count": 12,
"id": "d2056fee-e695-43b3-abfb-156e5d749c4d",
"metadata": {},
"outputs": [
@@ -110,11 +102,11 @@
"data": {
"text/html": [
"\n",
- " \n",
+ " \n",
" \n",
@@ -130,7 +122,7 @@
{
"data": {
"application/javascript": [
- "window.connectPlugin && window.connectPlugin(\"24162cfb-f786-4fe2-84e6-cdbbe0865546\")"
+ "window.connectPlugin && window.connectPlugin(\"73c219ba-0b2f-4e68-a934-de0708a96ab7\")"
],
"text/plain": [
""
@@ -142,7 +134,7 @@
{
"data": {
"text/html": [
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+ ""
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@@ -154,21 +146,21 @@
{
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+ ""
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- "execution_count": 7,
+ "execution_count": 12,
"metadata": {},
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],
"source": [
- "view(point_sets=source_landmarks)"
+ "view(point_set=source_landmarks)"
]
},
{
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- "execution_count": 8,
+ "execution_count": 13,
"id": "43d2f0b2-8268-424c-83c2-cc932e3ea598",
"metadata": {},
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@@ -183,7 +175,7 @@
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+ "execution_count": 15,
"id": "bf7eefb4-ee5b-4557-8e4a-fa660f7444ad",
"metadata": {},
"outputs": [
@@ -191,11 +183,11 @@
"data": {
"text/html": [
"\n",
- " \n",
+ " \n",
" \n",
@@ -211,7 +203,7 @@
{
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"application/javascript": [
- "window.connectPlugin && window.connectPlugin(\"24162cfb-f786-4fe2-84e6-cdbbe0865546\")"
+ "window.connectPlugin && window.connectPlugin(\"73c219ba-0b2f-4e68-a934-de0708a96ab7\")"
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@@ -223,7 +215,7 @@
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@@ -235,21 +227,21 @@
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- "execution_count": 9,
+ "execution_count": 15,
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"source": [
- "view(point_sets=target_landmarks)"
+ "view(point_set=target_landmarks)"
]
},
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- "execution_count": 10,
+ "execution_count": 16,
"id": "717e7802-99a8-4b18-8335-6f753153286a",
"metadata": {},
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@@ -261,7 +253,7 @@
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+ "execution_count": 17,
"id": "3795053f-9539-4148-a274-e0cb6df49c35",
"metadata": {},
"outputs": [
@@ -269,11 +261,11 @@
"data": {
"text/html": [
"\n",
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+ " \n",
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@@ -289,7 +281,7 @@
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- "window.connectPlugin && window.connectPlugin(\"24162cfb-f786-4fe2-84e6-cdbbe0865546\")"
+ "window.connectPlugin && window.connectPlugin(\"73c219ba-0b2f-4e68-a934-de0708a96ab7\")"
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@@ -301,7 +293,7 @@
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@@ -313,10 +305,10 @@
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@@ -327,7 +319,7 @@
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+ "execution_count": 18,
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@@ -342,7 +334,7 @@
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+ "execution_count": 19,
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@@ -352,7 +344,7 @@
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+ "execution_count": 20,
"id": "890bad50-b683-4f85-9a32-800283f272d5",
"metadata": {},
"outputs": [
@@ -360,11 +352,11 @@
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+ " \n",
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@@ -380,7 +372,7 @@
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- "window.connectPlugin && window.connectPlugin(\"24162cfb-f786-4fe2-84e6-cdbbe0865546\")"
+ "window.connectPlugin && window.connectPlugin(\"73c219ba-0b2f-4e68-a934-de0708a96ab7\")"
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@@ -392,7 +384,7 @@
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@@ -404,10 +396,10 @@
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+ "execution_count": 20,
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@@ -418,7 +410,7 @@
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+ "execution_count": 21,
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@@ -429,7 +421,7 @@
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+ "execution_count": 22,
"id": "7aa317d6-f43b-4682-83e3-fe0f95b38e01",
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"outputs": [
@@ -437,11 +429,11 @@
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"\n",
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+ " \n",
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@@ -457,7 +449,7 @@
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- "window.connectPlugin && window.connectPlugin(\"24162cfb-f786-4fe2-84e6-cdbbe0865546\")"
+ "window.connectPlugin && window.connectPlugin(\"73c219ba-0b2f-4e68-a934-de0708a96ab7\")"
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@@ -469,7 +461,7 @@
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@@ -481,10 +473,10 @@
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+ "execution_count": 22,
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@@ -518,7 +510,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
- "version": "3.8.10"
+ "version": "3.9.12"
}
},
"nbformat": 4,