Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

refine cluster using polygon #115

Open
agbondy opened this issue Jun 1, 2019 · 4 comments
Open

refine cluster using polygon #115

agbondy opened this issue Jun 1, 2019 · 4 comments

Comments

@agbondy
Copy link
Contributor

agbondy commented Jun 1, 2019

In the feature view, is it possible to draw a polygon for the purposes of refining a cluster -- that is, to define the cluster as only those points within the polygon?

@aliddell
Copy link
Collaborator

aliddell commented Jun 3, 2019

One can split the cluster in the feature view (press 'S' when the feature window is in the foreground), and from there you can decide what to do with the other spikes (keep, delete).

@aliddell aliddell closed this as completed Jun 3, 2019
@agbondy
Copy link
Contributor Author

agbondy commented Jun 3, 2019

Sorry, I should have been more clear. What I mean is best illustrated by this example panel from the feature window. What you see here is that JRClust has identified a real unit but it has missed most of its events (i.e. grey background dots under the black cluster). What I'd like to do is redefine the unit by drawing a polygon to include all these events (or be able to define a new unit by drawing polygons in the feature window). Is there a way to achieve this? I found this basic issue (JRClust assigning many of the units in a cluster to background) to be quite common.

Capture

@aliddell aliddell reopened this Jun 3, 2019
@aliddell
Copy link
Collaborator

aliddell commented Jun 3, 2019

No, this isn't possible in JRCLUST. The only way to approximate this is by finding (by trial and error, unfortunately) which unit or units these spikes belong to and merging them with the unit you've got selected.

@agbondy
Copy link
Contributor Author

agbondy commented Jun 5, 2019

This would be a very useful feature imo!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants