Missing CUDA 11.8?

[RaulPPelaez]

Hi, we use your github action in NNPOps, we are trying to write workflows for testing with CUDA 11.8 openmm/NNPOps#94 , would you consider adding it?
Thanks.

[Jimver]

Thx for the report! This is available in version v0.2.10 now.

[RaulPPelaez]

Thanks for the effort!

[iiSeymour]

I just updated to v0.2.10 for CUDA 11.8 but I'm running into disk limitations - any ideas?
https://github.com/nanoporetech/dorado/actions/runs/4512457985/jobs/7945932085

/usr/bin/sudo /opt/hostedtoolcache/cuda_installer-linux/11.8.0/x64/cuda_installer-linux-5.15.0-1034-azure_11.8.0.run --silent --toolkit --samples
terminate called after throwing an instance of 'boost::filesystem::filesystem_error'
  what():  boost::filesystem::copy_file: No space left on device: "./builds/nsight_systems/host-linux-x64/python/bin/python", "/usr/local/cuda-11.8/nsight-systems-2022.4.2/host-linux-x64/python/bin/python"
Aborted (core dumped)
Warning: Error during installation: Error: The process '/usr/bin/sudo' failed with exit code [13](https://github.com/nanoporetech/dorado/actions/runs/4512457985/jobs/7945932085#step:4:14)4

[Jimver]

I just updated to v0.2.10 for CUDA 11.8 but I'm running into disk limitations - any ideas?
https://github.com/nanoporetech/dorado/actions/runs/4512457985/jobs/7945932085

/usr/bin/sudo /opt/hostedtoolcache/cuda_installer-linux/11.8.0/x64/cuda_installer-linux-5.15.0-1034-azure_11.8.0.run --silent --toolkit --samples
terminate called after throwing an instance of 'boost::filesystem::filesystem_error'
  what():  boost::filesystem::copy_file: No space left on device: "./builds/nsight_systems/host-linux-x64/python/bin/python", "/usr/local/cuda-11.8/nsight-systems-2022.4.2/host-linux-x64/python/bin/python"
Aborted (core dumped)
Warning: Error during installation: Error: The process '/usr/bin/sudo' failed with exit code [13](https://github.com/nanoporetech/dorado/actions/runs/4512457985/jobs/7945932085#step:4:14)4

@iiSeymour this is a known issue. Can you check if the fix in #207 (comment) fixes it?

[iiSeymour]

I need the whole toolkit so ended up going with a different solution. Just clearing out some space manually on the Linux runner solved it:

- name: Clean up diskspace
  if: matrix.os == 'ubuntu-20.04'
  run: sudo rm -rf /usr/share/dotnet /opt/ghc /usr/local/share/boost "$AGENT_TOOLSDIRECTORY"

https://github.com/nanoporetech/dorado/pull/135/files