Error in lines 970-971

[fishbacp]

I was not able to get this file to work unless I changed lines 970-971 from

 M[i, y_coor] = B[a, z]
 M[y_coor, i] = B[a, z]

to

M[i, y_coor-1] = B[a, z]
M[y_coor-1, i] = B[a, z]

[titipata]

Thanks for the report! Can you make a PR to fix this error?

[fishbacp]

The issue appears to be a line 961: ``` py B = np.reshape(B, (n, int(len(B)/n)), order='F') ``` I created a Watts-Strogatz graph as follows: ``` import networkx as nx n = 10 k = 4 p = .01 G = nx.watts_strogatz_graph(n,k,p) A = nx.to_numpy_matrix(G) ``` The function call ``` py SWP, delta_C, delta_L=small_world_propensity(A, method='O') ``` produced the error message "ValueError: cannot reshape array of size 119 into shape (10,11)" In this case, n=10, B has length 119, and int(len(B)/n)=11 so ``` B = np.reshape(B, (n, int(len(B)/n)), order='F') ``` throws the error.

…

On Mon, Dec 30, 2019 at 5:27 PM Titipat Achakulvisut < ***@***.***> wrote: Thanks for the report! Can you make a PR to fix this error? — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#2?email_source=notifications&email_token=AJWRNJMRDHY7VBJ5FMQWCRDQ3JYTNA5CNFSM4KBQTR32YY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOEH3K5RQ#issuecomment-569814726>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AJWRNJJ3TXHHWLLJWUDKJATQ3JYTNANCNFSM4KBQTR3Q> .

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[titipata]

@fishbacp Thanks a ton! I did a quick fix to the code and it should work now. I'm not sure if the math is completely right tho. Feel free to take a look!

import networkx as nx
import numpy as np
from nct import small_world_propensity, regular_matrix_generator

n = 10
k = 4
p = .01
G = nx.watts_strogatz_graph(n,k,p)
G = np.array(nx.to_numpy_matrix(G)) # has to be array input instead of matrix
SWP, delta_C, delta_L = small_world_propensity(G, method='O')
print(SWP, delta_C, delta_L)
>> (0.29237040411638093, 1.0, 0.03846153846153852)