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Installing Zoonyper

Dependencies (work in progress)

You must have at least version 3.9 of Python (currently).

Quick Install in Jupyter Notebook

If you just want to try things out or are in a hurry and want to install the developer version in whichever Python kernel you're currently running in a Notebook, here's a handy bash script that you can copy and paste into a Jupyter notebook. The Notebook should be run in the directory where zoonyper will be installed:

In production

When in production, you can use PyPI to install zoonyper:

$ pip install zoonyper

Warning

This command will not work currently, as this package is not yet published on PyPI.

In development

Because this project is in active development, you will likely need to install from the repository for the time being.

In order to do so, you need to first ensure that you have installed Poetry:

$ curl -sSL https://install.python-poetry.org | python3 -

Warning

Make sure the command above, after the pipe | refers to the correctly linked Python, i.e. you may want it to refer to python or python3 or whatever your symlinked binary is called.

Note

Don't forget to add export PATH="/home/<username>/.local/bin:$PATH" to your shell configuration file in order to get access to the poetry tool on your command line.

Then, clone the repository:

$ git clone [email protected]:Living-with-machines/zoonyper.git

Once it has been cloned, navigate into the newly created local repository:

$ cd zoonyper

First, you will want to activate Poetry's shell:

$ poetry shell

Then, install the dependencies:

$ poetry install

Note

You may run into an issue here, with the installation of furo:

• Installing furo (2022.12.7): Failed

    _WheelFileValidationError

    ["In /home/<username>/.cache/pypoetry/artifacts/38/be/e4/0afbe5654cdc0168ebfaf6864c20009c2eec3dd953961a7d44e0ed3fe9/furo-2022.12.7-py3-none-any.whl, hash / size of furo/__init__.py didn't match RECORD", "In /home/<username>/.cache/pypoetry/artifacts/38/be/e4/0afbe5654cdc0168ebfaf6864c20009c2eec3dd953961a7d44e0ed3fe9/furo-2022.12.7-py3-none-any.whl, hash / size of furo/_demo_module.py didn't match RECORD", ... [etc]

If this is the case, see the solution in the python-poetry repository

The easiest solution is to exit poetry (by running exit and running:

$ pip install poetry==1.4.0

This is a problem with poetry 1.4.1 so it may be solved by the time you're reading this.

Following that, you can run a build and pip install from the local files:

$ poetry build && pip install dist/zoonyper-0.1.0.tar.gz

Now you should be able to use zoonyper as a regular package on your local computer.

Warning

If you change the source code (located in the zoonyper directory in the repository), you will need to rerun the poetry build and the pip install dist/zoonyper-0.1.0.tar.gz commands again.

Quick Install in Jupyter Notebook

If you are in a hurry and want to install the developer version in whichever Python kernel you're currently running in a Notebook, here's a handy bash script that you can copy and paste into a Jupyter notebook:

%%bash

curl -sSL https://install.python-poetry.org | python - &&
if [ ! -d "zoonyper" ] ; then git clone [email protected]:Living-with-machines/zoonyper.git; fi &&
cd zoonyper &&
poetry shell &&
poetry build &&
pip install dist/zoonyper-0.1.0.tar.gz