diff --git a/.nf-core.yml b/.nf-core.yml index a3584e6..8a7d008 100644 --- a/.nf-core.yml +++ b/.nf-core.yml @@ -18,5 +18,5 @@ template: org: nf-core outdir: . skip_features: null - version: 1.0dev + version: 1.2.0 update: null diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml index 31e53c4..45e17bb 100644 --- a/assets/multiqc_config.yml +++ b/assets/multiqc_config.yml @@ -1,7 +1,7 @@ report_comment: > - This report has been generated by the nf-core/crispriscreen + This report has been generated by the nf-core/crispriscreen analysis pipeline. For information about how to interpret these results, please see the - documentation. + documentation. report_section_order: "nf-core-crispriscreen-methods-description": order: -1000 diff --git a/nextflow.config b/nextflow.config index cf0a3f4..caf3952 100644 --- a/nextflow.config +++ b/nextflow.config @@ -191,9 +191,6 @@ profiles { // Load nf-core custom profiles from different Institutions includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/nfcore_custom.config" : "/dev/null" -// Load nf-core/crispriscreen custom profiles from different institutions. -// includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/pipeline/crispriscreen.config" : "/dev/null" - // Set default registry for Apptainer, Docker, Podman, Charliecloud and Singularity independent of -profile // Will not be used unless Apptainer / Docker / Podman / Charliecloud / Singularity are enabled // Set to your registry if you have a mirror of containers @@ -255,7 +252,7 @@ manifest { description = """Pipeline to process next generation sequencing data obtained from CRISPRi repression library screenings.""" mainScript = 'main.nf' nextflowVersion = '!>=24.04.2' - version = '1.0dev' + version = '1.2.0' doi = '' } diff --git a/subworkflows/nf-core/utils_nextflow_pipeline/tests/nextflow.config b/subworkflows/nf-core/utils_nextflow_pipeline/tests/nextflow.config index a09572e..5aef37c 100644 --- a/subworkflows/nf-core/utils_nextflow_pipeline/tests/nextflow.config +++ b/subworkflows/nf-core/utils_nextflow_pipeline/tests/nextflow.config @@ -1,9 +1,10 @@ manifest { - name = 'nextflow_workflow' - author = """nf-core""" - homePage = 'https://127.0.0.1' - description = """Dummy pipeline""" - nextflowVersion = '!>=23.04.0' - version = '9.9.9' - doi = 'https://doi.org/10.5281/zenodo.5070524' + name = 'nf-core/crispriscreen' + author = """Michael Jahn""" + homePage = 'https://github.com/nf-core/crispriscreen' + description = """Pipeline to process next generation sequencing data obtained from CRISPRi repression library screenings.""" + mainScript = 'main.nf' + nextflowVersion = '!>=24.04.2' + version = '1.2.0' + doi = '' }