diff --git a/WORC/doc/_build/doctrees/environment.pickle b/WORC/doc/_build/doctrees/environment.pickle index 829b6551..a3b51161 100644 Binary files a/WORC/doc/_build/doctrees/environment.pickle and b/WORC/doc/_build/doctrees/environment.pickle differ diff --git a/WORC/doc/_build/doctrees/static/changelog.doctree b/WORC/doc/_build/doctrees/static/changelog.doctree index 7edcfdf4..c7098123 100644 Binary files a/WORC/doc/_build/doctrees/static/changelog.doctree and b/WORC/doc/_build/doctrees/static/changelog.doctree differ diff --git a/WORC/doc/_build/doctrees/static/quick_start.doctree b/WORC/doc/_build/doctrees/static/quick_start.doctree index 12818228..a520ad0a 100644 Binary files a/WORC/doc/_build/doctrees/static/quick_start.doctree and b/WORC/doc/_build/doctrees/static/quick_start.doctree differ diff --git a/WORC/doc/_build/html/_modules/WORC/featureprocessing/Relief.html b/WORC/doc/_build/html/_modules/WORC/featureprocessing/Relief.html index cf734351..82359d8c 100644 --- a/WORC/doc/_build/html/_modules/WORC/featureprocessing/Relief.html +++ b/WORC/doc/_build/html/_modules/WORC/featureprocessing/Relief.html @@ -165,7 +165,7 @@
#!/usr/bin/env python
-# Copyright 2016-2019 Biomedical Imaging Group Rotterdam, Departments of
+# Copyright 2016-2021 Biomedical Imaging Group Rotterdam, Departments of
# Medical Informatics and Radiology, Erasmus MC, Rotterdam, The Netherlands
#
# Licensed under the Apache License, Version 2.0 (the "License");
@@ -181,7 +181,7 @@ Source code for WORC.featureprocessing.Relief
# limitations under the License.
from sklearn.base import BaseEstimator
-from sklearn.feature_selection.base import SelectorMixin
+from sklearn.feature_selection import SelectorMixin
import numpy as np
import sklearn.neighbors as nn
# from skrebate import ReliefF
diff --git a/WORC/doc/_build/html/_modules/WORC/featureprocessing/SelectGroups.html b/WORC/doc/_build/html/_modules/WORC/featureprocessing/SelectGroups.html
index f2499833..ec4ebc55 100644
--- a/WORC/doc/_build/html/_modules/WORC/featureprocessing/SelectGroups.html
+++ b/WORC/doc/_build/html/_modules/WORC/featureprocessing/SelectGroups.html
@@ -165,7 +165,7 @@
Source code for WORC.featureprocessing.SelectGroups
#!/usr/bin/env python
-# Copyright 2016-2020 Biomedical Imaging Group Rotterdam, Departments of
+# Copyright 2016-2021 Biomedical Imaging Group Rotterdam, Departments of
# Medical Informatics and Radiology, Erasmus MC, Rotterdam, The Netherlands
#
# Licensed under the Apache License, Version 2.0 (the "License");
@@ -181,7 +181,7 @@ Source code for WORC.featureprocessing.SelectGroups
# limitations under the License.
from sklearn.base import BaseEstimator
-from sklearn.feature_selection.base import SelectorMixin
+from sklearn.feature_selection import SelectorMixin
import numpy as np
diff --git a/WORC/doc/_build/html/_modules/WORC/featureprocessing/SelectIndividuals.html b/WORC/doc/_build/html/_modules/WORC/featureprocessing/SelectIndividuals.html
index bb5fc11f..a349a0d0 100644
--- a/WORC/doc/_build/html/_modules/WORC/featureprocessing/SelectIndividuals.html
+++ b/WORC/doc/_build/html/_modules/WORC/featureprocessing/SelectIndividuals.html
@@ -181,7 +181,7 @@ Source code for WORC.featureprocessing.SelectIndividuals
# limitations under the License.
from sklearn.base import BaseEstimator
-from sklearn.feature_selection.base import SelectorMixin
+from sklearn.feature_selection import SelectorMixin
import numpy as np
diff --git a/WORC/doc/_build/html/_modules/WORC/featureprocessing/StatisticalTestThreshold.html b/WORC/doc/_build/html/_modules/WORC/featureprocessing/StatisticalTestThreshold.html
index ec23bae8..3d9c32d5 100644
--- a/WORC/doc/_build/html/_modules/WORC/featureprocessing/StatisticalTestThreshold.html
+++ b/WORC/doc/_build/html/_modules/WORC/featureprocessing/StatisticalTestThreshold.html
@@ -181,7 +181,7 @@ Source code for WORC.featureprocessing.StatisticalTestThreshold
# limitations under the License.
from sklearn.base import BaseEstimator
-from sklearn.feature_selection.base import SelectorMixin
+from sklearn.feature_selection import SelectorMixin
import numpy as np
from scipy.stats import ttest_ind, ranksums, mannwhitneyu
diff --git a/WORC/doc/_build/html/_modules/WORC/featureprocessing/VarianceThreshold.html b/WORC/doc/_build/html/_modules/WORC/featureprocessing/VarianceThreshold.html
index f0a25fc7..557e4e21 100644
--- a/WORC/doc/_build/html/_modules/WORC/featureprocessing/VarianceThreshold.html
+++ b/WORC/doc/_build/html/_modules/WORC/featureprocessing/VarianceThreshold.html
@@ -182,7 +182,7 @@ Source code for WORC.featureprocessing.VarianceThreshold
from sklearn.feature_selection import VarianceThreshold
from sklearn.base import BaseEstimator
-from sklearn.feature_selection.base import SelectorMixin
+from sklearn.feature_selection import SelectorMixin
import numpy as np
import WORC.addexceptions as ae
diff --git a/WORC/doc/_build/html/_sources/static/quick_start.rst.txt b/WORC/doc/_build/html/_sources/static/quick_start.rst.txt
index a3a17661..a1cca080 100644
--- a/WORC/doc/_build/html/_sources/static/quick_start.rst.txt
+++ b/WORC/doc/_build/html/_sources/static/quick_start.rst.txt
@@ -181,7 +181,7 @@ After defining the inputs, the following code can be used to run your first expe
experiment.segmentations_from_this_directory(imagedatadir,
segmentation_file_name=segmentation_file_name)
experiment.labels_from_this_file(label_file)
- experiment.predict_labels([label_name])
+ experiment.predict_labels(label_name)
# Use the standard workflow for your specific modus
if modus == 'binary_classification':
diff --git a/WORC/doc/_build/html/searchindex.js b/WORC/doc/_build/html/searchindex.js
index 8bccab4f..370cf0d1 100644
--- a/WORC/doc/_build/html/searchindex.js
+++ b/WORC/doc/_build/html/searchindex.js
@@ -1 +1 @@
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diff --git a/WORC/doc/_build/html/static/changelog.html b/WORC/doc/_build/html/static/changelog.html
index 85602d02..d275ad08 100644
--- a/WORC/doc/_build/html/static/changelog.html
+++ b/WORC/doc/_build/html/static/changelog.html
@@ -325,6 +325,8 @@ 3.4.4 - 2021-07-01ΒΆ
Bug where most recent added estimators were not valid in SimpleWORC.
+SelectorMixin is now imported directly from sklearn.feature_selection,
+as sklearn.feature_selection.base is deprecated and will be removed.