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Implement end-to-end testing of the workflow #29

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elliotfontaine opened this issue Jun 27, 2024 · 0 comments
Open
1 of 5 tasks

Implement end-to-end testing of the workflow #29

elliotfontaine opened this issue Jun 27, 2024 · 0 comments
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@elliotfontaine
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type:cicd Continuous integration / deployment (actions, tests...) type:packaging making the project easier to install
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0.1.0

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@elliotfontaine
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elliotfontaine commented Jun 27, 2024 •
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The first version would be with InfluxDB disabled.

  • Choose test files (toy dataset)
  • Choose invariants
  • Investigate how to do tests with Cylc
  • Write test
  • Setup tests as Github Actions

Choose test files (toy dataset)

Choose invariants

Which values we want to be tested (identified metabolites? etc)

Investigate how to do tests with Cylc

Might be worth to check how test-tutorial-workflow is implemented here by the Cylc dev team.

Write test

Setup tests as Github Actions
@elliotfontaine elliotfontaine added type:packaging making the project easier to install type:cicd Continuous integration / deployment (actions, tests...) labels Jun 27, 2024
@elliotfontaine elliotfontaine added this to the 0.1.0 milestone Jun 27, 2024
@elliotfontaine elliotfontaine self-assigned this Jun 27, 2024
This was referenced Jun 27, 2024
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type:cicd Continuous integration / deployment (actions, tests...) type:packaging making the project easier to install
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