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BUG: Suite2P gui not saving update to NWB file #1138

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JohnStout opened this issue Aug 3, 2024 · 1 comment
Open

BUG: Suite2P gui not saving update to NWB file #1138

JohnStout opened this issue Aug 3, 2024 · 1 comment
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@JohnStout
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Describe the issue:

When working in the GUI, the dropdown option for "save NWB file" doesn't seem to work. My version is 0.14.4 but I tried this on 0.14.2. I have tried loading the stat.npy or a .nwb file prior to saving the output.

Saving .nwb files works fine when running suite2P and setting ops['save_NWB']=True, just doesn't want to update nor save out NWB files from the GUI interface (after suite2P algorithms are run).

Any thoughts/recommendations?

Thanks!
John

Reproduce the code example:

No code. This is a bug report for the GUI interface.

Error message:

No response

Version information:

suite2p v0.14.4

Context for the issue:

No response

@chriski777
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@JohnStout, have you checked inside the suite2p of your save_path0 directory? An ophys.nwb file should be saved there once you use the Save NWB File on the GUI. If this doesn't solve your problem, can you elaborate more on the steps you're taking so that I can reproduce this error?

@chriski777 chriski777 self-assigned this Dec 26, 2024
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