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as(<numLike>, "dgeMatrix") is deprecated #65

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schuemie opened this issue Dec 6, 2022 · 0 comments

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schuemie commented Dec 6, 2022

Under specific circumstances, the following warning is thrown:

as(<numLike>, "dgeMatrix") is deprecated since Matrix 1.5-0; do as(as(as(., "dMatrix"), "generalMatrix"), "unpackedMatrix") instead

I suspect this originates here. The following code reproduces this behavior, but only once per R session:

library(survival)
poissonData <- dplyr::tibble(
  y = 0,
  caseId = 1,
  x = TRUE,
  logDays = 3.4
)

cyclopsData <- Cyclops::createCyclopsData(
  y ~ x + strata(caseId) + offset(logDays),
  modelType = "cpr",
  data = poissonData
)

Could the code be modified as suggested in the warning?

The text was updated successfully, but these errors were encountered:

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