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Rotation of output images in prostate_mri_anatomy #481

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FaresAlMohamad opened this issue Aug 4, 2023 · 2 comments
Closed

Rotation of output images in prostate_mri_anatomy #481

FaresAlMohamad opened this issue Aug 4, 2023 · 2 comments

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@FaresAlMohamad
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This problem is about the inference.json config file for the prostate_mri_anatomy model. The transformations applied to the test data during preprocessing are not reversed during postprocessing; thus, the resulting predictions have a different rotation compared to the original images and labels. I would like to add an invertd() function to postprocessing.

Additionally, running the inference on a PC without a GPU leads to an error because the handlers function 'CheckpointLoader' attempts to load the model to the GPU. I want to add a parameter that loads the model to the CPU when the GPU is unavailable.

@yiheng-wang-nv
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Thanks for posting this issue, the enhancements will be helpful. Welcome to contribute the updates, and if you meet any issues when doing the changes, feel free to ask.

@yiheng-wang-nv
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This feature is implemented by @FaresAlMohamad in #482

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