Enhance Deepedit bundle to enable finetune and early stopping #504
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Signed-off-by: Yiheng Wang <[email protected]>
Signed-off-by: Yiheng Wang <[email protected]>
yiheng-wang-nv
commented
Sep 14, 2023
Signed-off-by: Yiheng Wang <[email protected]>
yiheng-wang-nv
commented
Sep 14, 2023
|
/build |
Nic-Ma
reviewed
Sep 14, 2023
Signed-off-by: Yiheng Wang <[email protected]>
|
/build |
Signed-off-by: Yiheng Wang <[email protected]>
|
/build |
|
/build |
Nic-Ma
approved these changes
Sep 18, 2023
yiheng-wang-nv
added a commit
to yiheng-wang-nv/model-zoo
that referenced
this pull request
Jul 29, 2024
…t-MONAI#504) ### Description This PR is used to enable early stopping and finetune for the spleen deepedit annotation bundle. ### Status **Ready** ### Please ensure all the checkboxes: <!--- Put an `x` in all the boxes that apply, and remove the not applicable items --> - [x] Codeformat tests passed locally by running `./runtests.sh --codeformat`. - [ ] In-line docstrings updated. - [ ] Update `version` and `changelog` in `metadata.json` if changing an existing bundle. - [ ] Please ensure the naming rules in config files meet our requirements (please refer to: `CONTRIBUTING.md`). - [ ] Ensure versions of packages such as `monai`, `pytorch` and `numpy` are correct in `metadata.json`. - [ ] Descriptions should be consistent with the content, such as `eval_metrics` of the provided weights and TorchScript modules. - [ ] Files larger than 25MB are excluded and replaced by providing download links in `large_file.yml`. - [ ] Avoid using path that contains personal information within config files (such as use `/home/your_name/` for `"bundle_root"`). --------- Signed-off-by: Yiheng Wang <[email protected]>
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Description
This PR is used to enable early stopping and finetune for the spleen deepedit annotation bundle.
Status
Ready
Please ensure all the checkboxes:
./runtests.sh --codeformat.versionandchangeloginmetadata.jsonif changing an existing bundle.CONTRIBUTING.md).monai,pytorchandnumpyare correct inmetadata.json.eval_metricsof the provided weights and TorchScript modules.large_file.yml./home/your_name/for"bundle_root").