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This repository contains resources for molecular dynamics simulations, including blogs, referrence design, benchmarking code and demonstration applications on SaladCloud.

SaladCloud SCE Architectural Overview

https://github.com/SaladTechnologies/mds/blob/main/SCE_Architectural_Overview

Tutorials

If this is your first time building applications on SaladCloud, check this out:

https://docs.salad.com/tutorials/docker-run

GROMACS Benchmark

https://github.com/SaladTechnologies/mds/tree/main/gromacs-benchmark

https://blog.salad.com/gromacs-benchmark/

OpenMM Benchmark

https://github.com/SaladTechnologies/mds/tree/main/openmm-benchmark

https://blog.salad.com/openmm-gpu-benchmark/

Demo App 1 - Long-running tasks with managed data sync on SaladCloud

Job Queue - Salad Kelpie, Cloud Storage - Cloudflare R2

https://github.com/SaladTechnologies/mds/tree/main/demo-app1

Demo App 2 (v2) - Long-running tasks with progressive uploads on SaladCloud

Job Queue - AWS SQS, Cloud Storage - Cloudflare R2

https://github.com/SaladTechnologies/mds/tree/main/demo-app2v2