Workflow to compare micronuclear (MIC) and macronuclear (MAC) genomic libraries from Loxodes ciliates, to search for MIC-limited sequences and evidence of developmental genome editing.
Input files for this workflow are trimmed reads from Loxodes spp. and genome
assembly for L. magnus, listed in workflow/config.yml. Workflow to produce
these files: loxodes-assembly-workflow.
- Genomic sequencing for sorted MIC vs. MAC of Loxodes magnus: European Nucleotide Archive PRJEB55123
- Genomic sequencing for sorted MIC vs. MAC of Loxodes striatus: TK