-
Notifications
You must be signed in to change notification settings - Fork 23
/
config.json
128 lines (128 loc) · 4.29 KB
/
config.json
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
{
"firstLaunch": true,
"instanceName": "SynBioHub",
"instanceUrl": "http://synbiohub.org/",
"instanceLogo": "",
"keywords": "synbiohub",
"javaPath": "java",
"SBOLExplorerEndpoint": "http://localhost:13162/",
"useSBOLExplorer": true,
"theme": "default",
"themeParameters": {
"default": {
}
},
"webOfRegistriesUrl" : "https://wor.synbiohub.org",
"port": 7777,
"triplestore": {
"sparqlEndpoint": "http://localhost:8890/sparql",
"graphStoreEndpoint": "http://localhost:8890/sparql-graph-crud-auth/",
"defaultGraph": "http://synbiohub.org/public",
"graphPrefix": "http://synbiohub.org/",
"username": "dba",
"password": "dba",
"virtuosoINI": "/etc/virtuoso-opensource-7/virtuoso.ini",
"virtuosoDB": "/var/lib/virtuoso-opensource-7/db",
"isql": "isql-vt"
},
"databasePrefix": "http://synbiohub.org/",
"sessionSecret": "synbiohub_change_me",
"shareLinkSalt": "synbiohub_change_me",
"passwordSalt": "synbiohub_change_me",
"requireCompliant": false,
"requireComplete": false,
"requireBestPractice": false,
"removePublicEnabled": false,
"namespaces" : {
"xmlns:rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#",
"xmlns:dcterms": "http://purl.org/dc/terms/",
"xmlns:dc": "http://purl.org/dc/elements/1.1/",
"xmlns:sbh": "http://wiki.synbiohub.org/wiki/Terms/synbiohub#",
"xmlns:prov": "http://www.w3.org/ns/prov#",
"xmlns:sbol": "http://sbols.org/v2#",
"xmlns:xsd": "http://www.w3.org/2001/XMLSchema#",
"xmlns:rdfs": "http://www.w3.org/2000/01/rdf-schema#",
"xmlns:purl": "http://purl.obolibrary.org/obo/"
},
"webOfRegistries" : {
},
"uploadLimit": "150mb",
"resolveBatch": 20,
"fetchLimit": 1000,
"staggeredQueryLimit": 10000,
"mail": {
"sendgridApiKey": "",
"fromAddress": "[email protected]"
},
"collectionIcons": {
"http://synbiohub.org/public/igem/igem_collection/1": "/local/igem.png",
"http://synbiohub.org/public/eco/eco_collection/1": "/local/ekb.png",
"http://synbiohub.org/public/bsu/bsu_collection/1": "/local/bsu.png",
"http://synbiohub.org/public/jbei/jbei_collection/current": "/local/jbeir_public.png",
"http://synbiohub.org/public/acs/acs_collection/current": "/local/acs.png",
"http://synbiohub.org/public/cidar_ice/cidar_ice_collection/current": "/local/cidar.png"
},
"experimental": {
"dataIntegration": false
},
"fileExtensionToAttachmentType": {
"png": "http://wiki.synbiohub.org/wiki/Terms/synbiohub#imageAttachment"
},
"attachmentTypeToMimeType": {
"http://wiki.synbiohub.org/wiki/Terms/synbiohub#imageAttachment": "image/png"
},
"attachmentTypeToTypeName": {
"http://wiki.synbiohub.org/wiki/Terms/synbiohub#imageAttachment": "Image"
},
"iceMaxRetries": 10,
"iceRetryDelay": 500,
"remotes": {
},
"defaultLimit": 10,
"frontPageText": "<a href=\"/About\">SynBioHub</a> is a <i>design repository</i> for people designing biological constructs. It enables DNA and protein designs to be uploaded, then provides a shareable link to allow others to view them. SynBioHub also facilitates searching for information about existing useful parts and designs by combining data from a variety of sources.",
"allowPublicSignup": true,
"requireLogin": false,
"showModuleInteractions": false,
"prewarmSearch": true,
"bioschemas": {
"DataCatalog": {
"@context": {
"scheme":"http://schema.org/",
"bs":"http://bioschema.org/"
},
"@type": "https://schema.org/DataCatalog",
"provider": [
],
"publication": "https://pubs.acs.org/doi/abs/10.1021/acssynbio.7b00403",
"sourceOrganization": [
"Newcastle University"
]
},
"Dataset": {
"@context": {
"scheme":"http://schema.org/",
"bs":"http://bioschema.org/"
},
"@type": "https://schema.org/Dataset",
"creator": [
"SynBioHub"
],
"keywords": "synbiohub"
},
"DataRecord": {
"@context": {
"scheme":"http://schema.org/",
"bs":"http://bioschema.org/"
},
"@type": "https://bioschemas.org/DataRecord"
}
},
"plugins": {
"rendering": [],
"download": [],
"submit": [],
"curation": [],
"authorization": []
}
}