From d3de8906a1c77cb6162ddc5a5c17c70593848216 Mon Sep 17 00:00:00 2001 From: edkerk Date: Tue, 27 Jun 2023 00:22:26 +0200 Subject: [PATCH 1/9] fix: remake ecFVA plot with generic plot function --- src/geckomat/change_model/makeEcModel.m | 2 + src/geckomat/utilities/plotEcFVA.m | 36 +++++++ tutorials/full_ecModel/output/ecFVA.pdf | Bin 45356 -> 59044 bytes tutorials/full_ecModel/protocol.m | 125 ++++++++++-------------- 4 files changed, 89 insertions(+), 74 deletions(-) create mode 100644 src/geckomat/utilities/plotEcFVA.m diff --git a/src/geckomat/change_model/makeEcModel.m b/src/geckomat/change_model/makeEcModel.m index af65821bf..d1b3e7189 100644 --- a/src/geckomat/change_model/makeEcModel.m +++ b/src/geckomat/change_model/makeEcModel.m @@ -356,6 +356,7 @@ end usageRxns.lb = zeros(numel(usageRxns.rxns),1) - 1000; usageRxns.ub = zeros(numel(usageRxns.rxns),1); + usageRxns.rev = ones(numel(usageRxns.rxns),1); usageRxns.grRules = ec.genes(uniprotSortId); model = addRxns(model,usageRxns); end @@ -367,6 +368,7 @@ poolRxn.stoichCoeffs = {-1}; poolRxn.lb = -1000; poolRxn.ub = 0; +poolRxn.rev = 1; model = addRxns(model,poolRxn); model.ec=ec; diff --git a/src/geckomat/utilities/plotEcFVA.m b/src/geckomat/utilities/plotEcFVA.m new file mode 100644 index 000000000..6913f98a8 --- /dev/null +++ b/src/geckomat/utilities/plotEcFVA.m @@ -0,0 +1,36 @@ +function plotEcFVA(minFlux, maxFlux) +% plotEcFVA +% Plots cumulative distribution functions of ecFVA results from one or +% model ecModel(s) and/or GEM(s). +% +% Input: +% minFlux vector of minimum flux values, coming from ecFVA. If +% multiple ecModels/GEMs are to be visualized, then each +% column represents a separate model. +% maxFlux vector of maximum flux values, matching minFlux. + +numMods = size(minFlux,2); + +% Ignore zero flux reactions +for i=1:numMods + zeroFlux = abs(minFlux(:,i)) < 1e-10 & abs(maxFlux(:,i)) < 1e-10; + minFlux(zeroFlux,i) = NaN; + maxFlux(zeroFlux,i) = NaN; +end + +% Calculate flux ranges +fluxRange = maxFlux - minFlux; + +% Plot all together +hold on +legendText = cell(1,numel(numMods)); +for i=1:numMods + cdfplot(fluxRange(:,i)) + legendText{i} = (['Model #' num2str(i) ' (median: ' num2str(median(fluxRange(:,i),'omitnan')) ')']); +end +set(gca, 'XScale', 'log', 'Xlim', [1e-7 1e4]) +set(findall(gca, 'Type', 'Line'), 'LineWidth', 2) +legend(legendText, 'Location','northwest') +title('Flux variability (cumulative distribution)'); +xlabel('Variability range (mmol/gDCWh)'); +ylabel('Cumulative distribution'); diff --git a/tutorials/full_ecModel/output/ecFVA.pdf 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zHi*|Kp1>G+0&nDrcsvrcqA->xqdX`5V|S7`mWX&f4Go4oEg5+XXXLT8k;n3koY)}` z@Rg43ng@c>5aQ7p!-F&}CGsFWI7A6NW_TmczxNJlUK+ZS;iHB$$0g1Jq=Dg%Aq}Ci z8J<<*T@-o>b3deScW`z)lxQ)>=3tj)Ltuk;kc0jXz%rtJ8L&|1|56I@nCEY;aHFRp b;m26!EAskwd)=D}bQrWmWMt&5b`ZY-`WFwX diff --git a/tutorials/full_ecModel/protocol.m b/tutorials/full_ecModel/protocol.m index 6f4296d67..ce26edcaa 100644 --- a/tutorials/full_ecModel/protocol.m +++ b/tutorials/full_ecModel/protocol.m @@ -225,7 +225,7 @@ ecModel = setParam(ecModel,'obj','r_4041',1); % Run FBA sol = solveLP(ecModel,1); -bioRxnIdx = getIndexes(ecModel,ModelAdapter.params.bioRxn,'rxns'); +bioRxnIdx = getIndexes(ecModel,params.bioRxn,'rxns'); fprintf('Growth rate: %f /hour\n', sol.x(bioRxnIdx)) % The growth rate is far below 0.41 (the maximum growth rate of % S. cerevisiae, that is entered in the model adapter as obj.params.gR_exp. @@ -235,11 +235,11 @@ % upper bound of the protein pool exchange reaction can be increased to % whatever is required. This works, but STEP 17 is preferred. ecModel = setParam(ecModel, 'lb', 'r_4041', 0.41); -protPoolIdx = strcmp(ecModel.rxns, 'prot_pool_exchange'); -ecModel = setParam(ecModel, 'lb', protPoolIdx, -1000); -ecModel = setParam(ecModel, 'obj', protPoolIdx, 1); +ecModel = setParam(ecModel, 'lb', 'prot_pool_exchange', -1000); +ecModel = setParam(ecModel, 'obj', 'prot_pool_exchange', 1); sol = solveLP(ecModel); +protPoolIdx = strcmp(ecModel.rxns, 'prot_pool_exchange'); fprintf('Protein pool usage is: %.0f mg/gDCW.\n', abs(sol.x(protPoolIdx))) ecModel = setParam(ecModel,'lb',protPoolIdx,sol.x(protPoolIdx)); @@ -351,6 +351,8 @@ % STEP 22 Protein concentrations are flexibilized (increased), until the % intended growth rate is reached. This is condition-specific, so the % intended growth rate is gathered from the fluxData structure. +[ecModel, flexProt] = flexibilizeProtConcs(ecModel,fluxData.grRate(1),10); + % Neither individual protein levels nor total protein pool are limiting % growth. Test whether the starting model is able to reach 0.1. model = constrainFluxData(model,fluxData); @@ -403,13 +405,13 @@ % where it is stored, but we will navigate back to the current folder % afterwards. currentFolder = pwd; -cd(fullfile(ModelAdapter.params.path,'code')) +cd(fullfile(params.path,'code')) [fluxes, gRate] = plotCrabtree(ecModel); % fluxes has all the predicted fluxes, while gRate is a vector with the % corresponding growth rates that were simulated, as visualized on the % x-axis in the graph. % The plot will also be saved in the output subfolder. -saveas(gcf,fullfile(ModelAdapter.params.path,'output','crabtree.tiff')) +saveas(gcf,fullfile(params.path,'output','crabtree.tiff')) % The two graphs show (left:) exchange fluxes from simulations (lines) and % experiments (circles, from doi:10.1128/AEM.64.11.4226-4233.1998); and @@ -426,7 +428,7 @@ % Set protein pool to infinite, to mimic a conventional GEM ecModel_infProt=setProtPoolSize(ecModel,Inf); plotCrabtree(ecModel_infProt); -saveas(gcf,fullfile(ModelAdapter.params.path,'output','crabtree_infProt.tiff')) +saveas(gcf,fullfile(params.path,'output','crabtree_infProt.tiff')) % It is obvious that no total protein constraint is reached, and Crabtree % effect is not observed. @@ -435,16 +437,14 @@ ecModel_preTuning = loadEcModel('ecYeastGEM_stage2.yml'); ecModel_preTuning = setParam(ecModel_preTuning,'lb','r_1714',-1000); plotCrabtree(ecModel_preTuning); -saveas(gcf,fullfile(ModelAdapter.params.path,'output','crabtree_preStep17.tiff')) +saveas(gcf,fullfile(params.path,'output','crabtree_preStep17.tiff')) % Without kcat tuning, the model gets constrained too early (at too low % growth rates), which means that no solutions exist at high growth rates. -%% === FROM HERE NOT FULLY TESTED/UPDATED YET === - % STEP 25 Selecting objective functions ecModel = setParam(ecModel,'obj',params.bioRxn,1); sol = solveLP(ecModel) -disp(['Growth rate reached: ' num2str(abs(sol.f))]) +fprintf('Growth rate that is reached: %.4f /hour\n', abs(sol.f)) % Set growth lower bound to 99% of the previous value ecModel = setParam(ecModel,'lb',params.bioRxn,0.99*abs(sol.f)); % Minimize protein pool usage. As protein pool exchange is defined in the @@ -453,72 +453,49 @@ % reaction. ecModel = setParam(ecModel,'obj','prot_pool_exchange',1); sol = solveLP(ecModel) -disp(['Minimum protein pool usage: ' num2str(abs(sol.f)) ' mg/gDCW']) - -% STEP 26 Compare fluxes from ecModel and starting model -% Constrain with the same conditions to model and ecModel. We now fix the -% observed growth as lower bound ('min' in constrainFluxData) and allow 5% -% variability around the other measured fluxes. -% We know that growth can only reach 0.088, so use this instead of 0.1. -fluxData.grRate(1) = 0.088; -ecModel = constrainFluxData(ecModel,fluxData,1,'min',5); -% Minimize protein pool usage. -ecModel = setParam(ecModel,'obj','prot_pool_exchange',1); -solEC = solveLP(ecModel,1) - -% Apply (almost) the same to non-ecModel. Same constraints on fluxes, but -% objective function remains growth (cannot minimize protein usage). -model = constrainFluxData(model,fluxData,1,'min',5); -sol = solveLP(model,1) -% Note that with the 5% of variability, the model can reach higher growth -% rate than 0.0885, as it is allowed to take up a little bit more glucose -% this time. - -% Map the ecModel fluxes back to the non-ecModel -[mappedFlux, enzUsageFlux, usageEnz] = mapRxnsToConv(ecModel, model, solEC.x); - -% Print the fluxes next to each other, showing only exchange reactions -printFluxes(model,[sol.x mappedFlux]) -% Print the fluxes next to each other, showing all reactions -printFluxes(model,[sol.x mappedFlux],false) -% Look at ratio of ecModel / non-ecModel -ratioFlux = mappedFlux ./ sol.x; -ratioFlux(isnan(ratioFlux)) = 0; % Divisions by zero give NaN, reset to zero. -printFluxes(model,ratioFlux,false) +fprintf('Minimum protein pool usage: %.2f mg/gDCW\n', abs(sol.f)) -% STEP 27 Inspect enzyme usage +% STEP 26 Inspect enzyme usage % Show the result from the earlier simulation, without mapping to % non-ecModel. -usageData = enzymeUsage(ecModel,solEC.x); -usageReport = reportEnzymeUsage(ecModel,usageData,0.90); +ecModel = setParam(ecModel, 'obj', 'r_1714', 1); +ecModel = setParam(ecModel, 'lb', params.bioRxn, 0.25); +sol = solveLP(ecModel, 1); +usageData = enzymeUsage(ecModel, sol.x); +usageReport = reportEnzymeUsage(ecModel,usageData); +usageReport.topAbsUsage + +% STEP 27 Compare fluxes from ecModel and conventional GEM +sol = solveLP(ecModel); +% Map the ecModel fluxes back to the conventional GEM +[mappedFlux, enzUsageFlux, usageEnz] = mapRxnsToConv(ecModel, model, solEC.x); % STEP 28 Perform (ec)FVA -% Perform FVA -[minFluxEc, maxFluxEc] = ecFVA(ecModel, model); -[minFluxY, maxFluxY] = ecFVA(model, model); - -% Write results to output file -output = [model.rxns, model.rxnNames, num2cell([minFluxY, maxFluxY, minFluxEc, maxFluxEc])]'; -fID = fopen(fullfile(params.path,'output','ecFVA.tsv'),'w'); -fprintf(fID,'%s %s %s %s %s %s\n','rxnIDs', 'rxnNames', 'minFlux', ... - 'maxFlux', 'ec-minFlux', 'ec-maxFlux'); -fprintf(fID,'%s %s %g %g %g %g\n',output{:}); -fclose(fID); - -% Look at flux ranges to indicate reaction-level variability -fluxRange = maxFluxEc - minFluxEc; -fluxRangeY = maxFluxY - minFluxY; - -% Plot variability distributions of both models in 1 plot -hold on -cdfplot(fluxRange) -cdfplot(fluxRangeY) -set(gca, 'XScale', 'log', 'Xlim', [1e-8 1e4]) -set(findall(gca, 'Type', 'Line'), 'LineWidth', 2) -legend(['ecYeastGEM (mean: ' num2str(mean(fluxRange)) ')'],... - ['yeast-GEM (mean: ' num2str(mean(fluxRangeY)) ')'],... - 'Location','northwest') -title('Flux variability (cumulative distribution)'); -xlabel('Variability range [mmol/gDw h]'); -ylabel('Cumulative distribution'); +% Perform FVA on a conventional GEM, ecModel, and ecModel plus proteomics +% integration, all under similar exchange flux constraints. +% First make sure that the correct models are loaded +model = loadConventionalGEM(); +ecModel = loadEcModel('ecYeastGEM.yml'); +ecModelProt = loadEcModel('ecYeastGEM_stage4.yml'); + +% As protein model can maximum reach 0.088, also set this as constrain for +% all models. +fluxData.grRate(1) = 0.0880; + +% Apply same constraints on exchange fluxes +model = constrainFluxData(model,fluxData,1,'min',5); +ecModel = constrainFluxData(ecModel,fluxData,1,'min',5); +ecModelProt = constrainFluxData(ecModelProt,fluxData,1,'min',5); + +% Prepare output structure +minFlux = zeros(numel(model.rxns),3); +maxFlux = minFlux; + +% Run ecFVA for each model +[minFlux(:,1), maxFlux(:,1)] = ecFVA(model, model); +[minFlux(:,2), maxFlux(:,2)] = ecFVA(ecModel, model); +[minFlux(:,3), maxFlux(:,3)] = ecFVA(ecModelProt, model); + +% Plot ecFVA results and store in output/. +plotEcFVA(minFlux, maxFlux); saveas(gca, fullfile(params.path,'output','ecFVA.pdf')) From 22675c3edbbb95786d8e313aaa27256b48cd60d2 Mon Sep 17 00:00:00 2001 From: edkerk Date: Tue, 27 Jun 2023 00:23:59 +0200 Subject: [PATCH 2/9] fix: GECKOInstaller ignore doc subfolder --- GECKOInstaller.m | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/GECKOInstaller.m b/GECKOInstaller.m index b23686462..e00f33d24 100644 --- a/GECKOInstaller.m +++ b/GECKOInstaller.m @@ -84,6 +84,6 @@ function checkRAVENversion(minmVer) end properties (Constant) - FILE_FILTER = '.*\.git|.idea|tutorials.*|.github|_MACOSX'; + FILE_FILTER = '.*\.git|.idea|tutorials.*|.github|_MACOSX|doc'; end end From 7763515ae1b0ff262955a047367c262bf95262a6 Mon Sep 17 00:00:00 2001 From: edkerk Date: Tue, 27 Jun 2023 00:25:23 +0200 Subject: [PATCH 3/9] chore: updateGECKOdoc --- doc/index.html | 32 +-- .../geckomat/change_model/findMetSmiles.html | 125 +++++---- .../geckomat/change_model/makeEcModel.html | 122 ++++----- .../limit_proteins/updateProtPool.html | 100 +++---- .../model_adapter/ModelAdapterManager.html | 65 ++--- .../utilities/ecFSEOF/ecFlux_scanning.html | 250 +++++++++--------- .../utilities/ecFSEOF/run_ecFSEOF.html | 134 +++++----- doc/src/geckomat/utilities/getFluxTarget.html | 40 +-- doc/src/geckomat/utilities/index.html | 2 +- doc/src/geckomat/utilities/plotEcFVA.html | 91 +++++++ 10 files changed, 529 insertions(+), 432 deletions(-) create mode 100644 doc/src/geckomat/utilities/plotEcFVA.html diff --git a/doc/index.html b/doc/index.html index 6a370d3a6..92420d4de 100644 --- a/doc/index.html +++ b/doc/index.html @@ -19,22 +19,22 @@

Matlab Directories

Matlab Files found in these Directories

- - - - - - - - - - - - - - - -
ModelAdapter ecFVA getKcatAcrossIsoenzymes runDLKcat
ModelAdapterManager ecFlux_scanning getReactionsFromEnzyme run_ecFSEOF
abc_max enzymeUsage getStandardKcat saveEcModel
adapterTemplate fillProtConcs getcarbonnum selectKcatValue
addCarbonNum findECInDB getrSample sensitivityTuning
anaerobicModel findGECKOroot loadBRENDAdata setKcatForReactions
applyComplexData findMaxValue loadConventionalGEM setProtPoolSize
applyCustomKcats findMetSmiles loadDatabases sigmaFitter
applyKcatConstraints flexibilizeProtConcs loadEcModel startGECKOproject
bayesianSensitivityTuning fuzzyKcatMatching loadFluxData truncateValues
calculateFfactor getComplexData loadProtData updateGECKOdoc
calculateMW getConcControlCoeffs makeEcModel updateProtPool
changeMedia getECfromDatabase mapRxnsToConv updateprior
constrainFluxData getECfromGEM mergeDLKcatAndFuzzyKcats writeDLKcatInput
constrainProtConcs getECstring readDLKcatOutput
copyECtoGEM getFluxTarget reportEnzymeUsage
+ ModelAdapter ecFVA getKcatAcrossIsoenzymes reportEnzymeUsage + ModelAdapterManager ecFlux_scanning getReactionsFromEnzyme runDLKcat + abc_max enzymeUsage getStandardKcat run_ecFSEOF + adapterTemplate fillProtConcs getcarbonnum saveEcModel + addCarbonNum findECInDB getrSample selectKcatValue + anaerobicModel findGECKOroot loadBRENDAdata sensitivityTuning + applyComplexData findMaxValue loadConventionalGEM setKcatForReactions + applyCustomKcats findMetSmiles loadDatabases setProtPoolSize + applyKcatConstraints flexibilizeProtConcs loadEcModel sigmaFitter + bayesianSensitivityTuning fuzzyKcatMatching loadFluxData startGECKOproject + calculateFfactor getComplexData loadProtData truncateValues + calculateMW getConcControlCoeffs makeEcModel updateGECKOdoc + changeMedia getECfromDatabase mapRxnsToConv updateProtPool + constrainFluxData getECfromGEM mergeDLKcatAndFuzzyKcats updateprior + constrainProtConcs getECstring plotEcFVA writeDLKcatInput + copyECtoGEM getFluxTarget readDLKcatOutput
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diff --git a/doc/src/geckomat/change_model/findMetSmiles.html b/doc/src/geckomat/change_model/findMetSmiles.html index bfebf634d..071745579 100644 --- a/doc/src/geckomat/change_model/findMetSmiles.html +++ b/doc/src/geckomat/change_model/findMetSmiles.html @@ -84,10 +84,10 @@

SOURCE CODE ^end 0027 params = modelAdapter.params; 0028 -0029 [uniqueNames, ~, uniqueIdx] = unique(model.metNames); +0029 [uniqueNames, ~, uniqueIdx] = unique(regexprep(model.metNames,'^prot_.*','')); 0030 uniqueSmiles(1:numel(uniqueNames),1) = {''}; -0031 protMets = startsWith(uniqueNames,'prot_'); -0032 metMatch = false(length(uniqueNames),1); +0031 metMatch = false(length(uniqueNames),1); +0032 metMatch(strcmp(uniqueNames,'')) = 1; % No need trying to match empty fields 0033 if verbose; fprintf('Check for local SMILES database... '); end 0034 smilesDBfile = (fullfile(params.path,'data','smilesDB.tsv')); 0035 if exist(smilesDBfile,'file')==2 @@ -103,68 +103,67 @@

SOURCE CODE ^if verbose; fprintf('not found.\n'); end 0046 end 0047 -0048 if any(~metMatch & ~protMets) +0048 if any(~metMatch) 0049 progressbar('Querying PubChem for SMILES by metabolite names') -0050 numUnique = numel(uniqueNames); -0051 webOptions = weboptions('Timeout', 30); -0052 for i = 1:numel(uniqueNames) -0053 if metMatch(i) || protMets(i) -0054 continue; -0055 end -0056 retry = 0; -0057 while retry < 10 -0058 try -0059 smileResult = webread(['https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/name/' uniqueNames{i} '/property/CanonicalSMILES/TXT'], webOptions); -0060 %Sometimes multiple lines are given, with alternative SMILES. Only -0061 %keep the first suggestion. -0062 smileResult = regexp(smileResult,'(^\S*)\n','once','tokens'); -0063 uniqueSmiles{i,1} = smileResult{1,1}; -0064 retry = 15; % success: no retry -0065 catch exception -0066 %Sometimes the call fails, for example since the server is busy. In those cases -0067 %we will try 10 times. Some errors however are because the metabolite -0068 %name does no exist in the database (404) or some other error (the metabolite contains -0069 %a slash or similar, 400 or 500). In those cases we can -0070 %immediately give up. -0071 if (strcmp(exception.identifier, 'MATLAB:webservices:HTTP404StatusCodeError') || ... -0072 strcmp(exception.identifier, 'MATLAB:webservices:HTTP400StatusCodeError') || ... -0073 strcmp(exception.identifier, 'MATLAB:webservices:HTTP500StatusCodeError')) -0074 uniqueSmiles(i) = {''}; -0075 retry = 15; -0076 else -0077 retry = retry + 1; -0078 end -0079 end -0080 if retry == 10 -0081 error('Cannot reach PubChem. Check your internet connection and try again.') +0050 webOptions = weboptions('Timeout', 30); +0051 for i = 1:numel(uniqueNames) +0052 if metMatch(i) +0053 continue; +0054 end +0055 retry = 0; +0056 while retry < 10 +0057 try +0058 smileResult = webread(['https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/name/' uniqueNames{i} '/property/CanonicalSMILES/TXT'], webOptions); +0059 %Sometimes multiple lines are given, with alternative SMILES. Only +0060 %keep the first suggestion. +0061 smileResult = regexp(smileResult,'(^\S*)\n','once','tokens'); +0062 uniqueSmiles{i,1} = smileResult{1,1}; +0063 retry = 15; % success: no retry +0064 catch exception +0065 %Sometimes the call fails, for example since the server is busy. In those cases +0066 %we will try 10 times. Some errors however are because the metabolite +0067 %name does no exist in the database (404) or some other error (the metabolite contains +0068 %a slash or similar, 400 or 500). In those cases we can +0069 %immediately give up. +0070 if (strcmp(exception.identifier, 'MATLAB:webservices:HTTP404StatusCodeError') || ... +0071 strcmp(exception.identifier, 'MATLAB:webservices:HTTP400StatusCodeError') || ... +0072 strcmp(exception.identifier, 'MATLAB:webservices:HTTP500StatusCodeError')) +0073 uniqueSmiles(i) = {''}; +0074 retry = 15; +0075 else +0076 retry = retry + 1; +0077 end +0078 end +0079 if retry == 10 +0080 error('Cannot reach PubChem. Check your internet connection and try again.') +0081 end 0082 end -0083 end -0084 % Append one line each time, in case internet connection is lost -0085 % halfway. Open & close file each time to avoid leaving the file -0086 % open when breaking the function. -0087 out = [uniqueNames(i), uniqueSmiles(i)]; -0088 fID = fopen(smilesDBfile,'a'); -0089 fprintf(fID,'%s\t%s\n',out{:}); -0090 fclose(fID); -0091 progressbar(i/numel(uniqueNames)) -0092 end -0093 if verbose -0094 fprintf('Model-specific SMILES database stored at %s\n',smilesDBfile); -0095 end -0096 end -0097 newSmiles = uniqueSmiles(uniqueIdx); -0098 noSMILES = cellfun(@isempty,uniqueSmiles); -0099 successRatio = numel(find(noSMILES))/numel(uniqueSmiles); -0100 fprintf('SMILES could be found for %s%% of the unique metabolite names.\n',num2str(successRatio*100,'%.0f')) -0101 noSMILES = uniqueNames(noSMILES); -0102 -0103 if ~isfield(model,'metSmiles') || all(cellfun(@isempty,model.metSmiles)) -0104 model.metSmiles = newSmiles; -0105 else -0106 emptySmiles = cellfun(@isempty,model.metSmiles); -0107 model.metSmiles(emptySmiles) = newSmiles(emptySmiles); -0108 end -0109 end +0083 % Append one line each time, in case internet connection is lost +0084 % halfway. Open & close file each time to avoid leaving the file +0085 % open when breaking the function. +0086 out = [uniqueNames(i), uniqueSmiles(i)]; +0087 fID = fopen(smilesDBfile,'a'); +0088 fprintf(fID,'%s\t%s\n',out{:}); +0089 fclose(fID); +0090 progressbar(i/numel(uniqueNames)) +0091 end +0092 if verbose +0093 fprintf('Model-specific SMILES database stored at %s\n',smilesDBfile); +0094 end +0095 end +0096 newSmiles = uniqueSmiles(uniqueIdx); +0097 noSMILES = cellfun(@isempty,uniqueSmiles); +0098 successRatio = 1-(numel(find(noSMILES))/numel(uniqueSmiles)); +0099 fprintf('SMILES could be found for %s%% of the unique metabolite names.\n',num2str(successRatio*100,'%.0f')) +0100 noSMILES = uniqueNames(noSMILES); +0101 +0102 if ~isfield(model,'metSmiles') || all(cellfun(@isempty,model.metSmiles)) +0103 model.metSmiles = newSmiles; +0104 else +0105 emptySmiles = cellfun(@isempty,model.metSmiles); +0106 model.metSmiles(emptySmiles) = newSmiles(emptySmiles); +0107 end +0108 end
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\ No newline at end of file diff --git a/doc/src/geckomat/change_model/makeEcModel.html b/doc/src/geckomat/change_model/makeEcModel.html index bb0a5df73..0085c16ed 100644 --- a/doc/src/geckomat/change_model/makeEcModel.html +++ b/doc/src/geckomat/change_model/makeEcModel.html @@ -493,66 +493,68 @@

SOURCE CODE ^end 0357 usageRxns.lb = zeros(numel(usageRxns.rxns),1) - 1000; 0358 usageRxns.ub = zeros(numel(usageRxns.rxns),1); -0359 usageRxns.grRules = ec.genes(uniprotSortId); -0360 model = addRxns(model,usageRxns); -0361 end -0362 -0363 %12: Add protein pool reaction (with open UB) -0364 poolRxn.rxns = 'prot_pool_exchange'; -0365 poolRxn.rxnNames = poolRxn.rxns; -0366 poolRxn.mets = {'prot_pool'}; -0367 poolRxn.stoichCoeffs = {-1}; -0368 poolRxn.lb = -1000; -0369 poolRxn.ub = 0; -0370 model = addRxns(model,poolRxn); -0371 -0372 model.ec=ec; -0373 end -0374 -0375 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -0376 %Function that gets the model field grRules and returns the indexes of the -0377 %rules in which the pattern ") and (" is present. -0378 %Copied from standardizeGrRules -0379 % TODO: Make this an accessible function in a separate file in RAVEN and remove this -0380 %implementation. -0381 function indexes2check = findPotentialErrors(grRules,embedded,model) -0382 indxs_l = find(~cellfun(@isempty,strfind(grRules,') and ('))); -0383 indxs_l_L = find(~cellfun(@isempty,strfind(grRules,') and'))); -0384 indxs_l_R = find(~cellfun(@isempty,strfind(grRules,'and ('))); -0385 indexes2check = vertcat(indxs_l,indxs_l_L,indxs_l_R); -0386 indexes2check = unique(indexes2check); -0387 -0388 if ~isempty(indexes2check) -0389 -0390 if embedded -0391 EM = 'Potentially problematic ") AND (" in the grRules for reaction(s): '; -0392 dispEM(EM,false,model.rxns(indexes2check),true) -0393 else -0394 STR = 'Potentially problematic ") AND (", ") AND" or "AND ("relat'; -0395 STR = [STR,'ionships found in\n\n']; -0396 for i=1:length(indexes2check) -0397 index = indexes2check(i); -0398 STR = [STR ' - grRule #' model.rxns{index} ': ' grRules{index} '\n']; -0399 end -0400 STR = [STR,'\n This kind of relationships should only be present ']; -0401 STR = [STR,'in reactions catalysed by complexes of isoenzymes e']; -0402 STR = [STR,'.g.\n\n - (G1 or G2) and (G3 or G4)\n\n For these c']; -0403 STR = [STR,'ases modify the grRules manually, writing all the po']; -0404 STR = [STR,'ssible combinations e.g.\n\n - (G1 and G3) or (G1 a']; -0405 STR = [STR,'nd G4) or (G2 and G3) or (G2 and G4)\n\n For other c']; -0406 STR = [STR,'ases modify the correspondent grRules avoiding:\n\n ']; -0407 STR = [STR,' 1) Overall container brackets, e.g.\n "(G1 a']; -0408 STR = [STR,'nd G2)" should be "G1 and G2"\n\n 2) Single unit en']; -0409 STR = [STR,'zymes enclosed into brackets, e.g.\n "(G1)" s']; -0410 STR = [STR,'hould be "G1"\n\n 3) The use of uppercases for logi']; -0411 STR = [STR,'cal operators, e.g.\n "G1 OR G2" should be "G']; -0412 STR = [STR,'1 or G2"\n\n 4) Unbalanced brackets, e.g.\n ']; -0413 STR = [STR,'"((G1 and G2) or G3" should be "(G1 and G2) or G3"\n']; -0414 warning(sprintf(STR)) -0415 end -0416 end -0417 end -0418 +0359 usageRxns.rev = ones(numel(usageRxns.rxns),1); +0360 usageRxns.grRules = ec.genes(uniprotSortId); +0361 model = addRxns(model,usageRxns); +0362 end +0363 +0364 %12: Add protein pool reaction (with open UB) +0365 poolRxn.rxns = 'prot_pool_exchange'; +0366 poolRxn.rxnNames = poolRxn.rxns; +0367 poolRxn.mets = {'prot_pool'}; +0368 poolRxn.stoichCoeffs = {-1}; +0369 poolRxn.lb = -1000; +0370 poolRxn.ub = 0; +0371 poolRxn.rev = 1; +0372 model = addRxns(model,poolRxn); +0373 +0374 model.ec=ec; +0375 end +0376 +0377 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% +0378 %Function that gets the model field grRules and returns the indexes of the +0379 %rules in which the pattern ") and (" is present. +0380 %Copied from standardizeGrRules +0381 % TODO: Make this an accessible function in a separate file in RAVEN and remove this +0382 %implementation. +0383 function indexes2check = findPotentialErrors(grRules,embedded,model) +0384 indxs_l = find(~cellfun(@isempty,strfind(grRules,') and ('))); +0385 indxs_l_L = find(~cellfun(@isempty,strfind(grRules,') and'))); +0386 indxs_l_R = find(~cellfun(@isempty,strfind(grRules,'and ('))); +0387 indexes2check = vertcat(indxs_l,indxs_l_L,indxs_l_R); +0388 indexes2check = unique(indexes2check); +0389 +0390 if ~isempty(indexes2check) +0391 +0392 if embedded +0393 EM = 'Potentially problematic ") AND (" in the grRules for reaction(s): '; +0394 dispEM(EM,false,model.rxns(indexes2check),true) +0395 else +0396 STR = 'Potentially problematic ") AND (", ") AND" or "AND ("relat'; +0397 STR = [STR,'ionships found in\n\n']; +0398 for i=1:length(indexes2check) +0399 index = indexes2check(i); +0400 STR = [STR ' - grRule #' model.rxns{index} ': ' grRules{index} '\n']; +0401 end +0402 STR = [STR,'\n This kind of relationships should only be present ']; +0403 STR = [STR,'in reactions catalysed by complexes of isoenzymes e']; +0404 STR = [STR,'.g.\n\n - (G1 or G2) and (G3 or G4)\n\n For these c']; +0405 STR = [STR,'ases modify the grRules manually, writing all the po']; +0406 STR = [STR,'ssible combinations e.g.\n\n - (G1 and G3) or (G1 a']; +0407 STR = [STR,'nd G4) or (G2 and G3) or (G2 and G4)\n\n For other c']; +0408 STR = [STR,'ases modify the correspondent grRules avoiding:\n\n ']; +0409 STR = [STR,' 1) Overall container brackets, e.g.\n "(G1 a']; +0410 STR = [STR,'nd G2)" should be "G1 and G2"\n\n 2) Single unit en']; +0411 STR = [STR,'zymes enclosed into brackets, e.g.\n "(G1)" s']; +0412 STR = [STR,'hould be "G1"\n\n 3) The use of uppercases for logi']; +0413 STR = [STR,'cal operators, e.g.\n "G1 OR G2" should be "G']; +0414 STR = [STR,'1 or G2"\n\n 4) Unbalanced brackets, e.g.\n ']; +0415 STR = [STR,'"((G1 and G2) or G3" should be "(G1 and G2) or G3"\n']; +0416 warning(sprintf(STR)) +0417 end +0418 end +0419 end +0420
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\ No newline at end of file diff --git a/doc/src/geckomat/limit_proteins/updateProtPool.html b/doc/src/geckomat/limit_proteins/updateProtPool.html index 5373233d6..ce88a1a0b 100644 --- a/doc/src/geckomat/limit_proteins/updateProtPool.html +++ b/doc/src/geckomat/limit_proteins/updateProtPool.html @@ -35,7 +35,8 @@

DESCRIPTION ^SOURCE CODE ^% ecModel an ecModel in GECKO 3 format (with ecModel.ec structure) 0008 % Ptot total protein content in g/gDCW, overwrites the value 0009 % from modelAdapter. For instance, condition-specific -0010 % fluxData.Ptot from loadFluxData can be used. -0011 % modelAdapter a loaded model adapter (Optional, will otherwise use the -0012 % default model adapter). -0013 % Output: -0014 % model an ecModel where model.ec.concs is populated with -0015 % protein concentrations -0016 % Usage: -0017 % ecModel = updateProtPool(ecModel, Ptot, modelAdapter) -0018 -0019 if nargin < 3 || isempty(modelAdapter) -0020 modelAdapter = ModelAdapterManager.getDefault(); -0021 if isempty(modelAdapter) -0022 error('Either send in a modelAdapter or set the default model adapter in the ModelAdapterManager.') -0023 end -0024 end -0025 params = modelAdapter.params; -0026 -0027 if nargin < 2 || isempty(Ptot) -0028 Ptot = params.Ptot; -0029 disp(['Total protein content used: ' num2str(Ptot) ' [g protein/gDw]']) -0030 end -0031 -0032 % Convert Ptot to mg/gDW if provided in g/gDCW (which is default) -0033 if Ptot < 1 -0034 Ptot = Ptot * 1000; -0035 end -0036 -0037 Pmeas = sum(ecModel.ec.concs,'omitnan'); -0038 if Pmeas == 0 -0039 error('The model has not yet been constrained with proteomics, as ecModel.ec.concs is empty.') -0040 end -0041 -0042 Pnew = (Ptot - Pmeas) * params.f; -0043 -0044 if Pnew > 0 -0045 PoolRxnIdx = strcmp(ecModel.rxns,'prot_pool_exchange'); -0046 ecModel.lb(PoolRxnIdx) = -Pnew*params.sigma; -0047 sol = solveLP(ecModel); -0048 if isempty(sol.x) -0049 error(['Estimating the remaining protein pool by subtracting the ' ... -0050 'sum of measured enzyme concentrations (in ecModel.ec.concs) ' ... -0051 'from the total protein pool (Ptot) does not yield a functional ' ... -0052 'model.']) -0053 end -0054 else -0055 error('The total measured protein mass exceeds the total protein content.') -0056 end -0057 end +0010 % fluxData.Ptot from loadFluxData can be used. If nothing +0011 % is provided, the modelAdapter value is used. +0012 % modelAdapter a loaded model adapter (Optional, will otherwise use the +0013 % default model adapter). +0014 % Output: +0015 % model an ecModel where model.ec.concs is populated with +0016 % protein concentrations +0017 % Usage: +0018 % ecModel = updateProtPool(ecModel, Ptot, modelAdapter) +0019 +0020 if nargin < 3 || isempty(modelAdapter) +0021 modelAdapter = ModelAdapterManager.getDefault(); +0022 if isempty(modelAdapter) +0023 error('Either send in a modelAdapter or set the default model adapter in the ModelAdapterManager.') +0024 end +0025 end +0026 params = modelAdapter.params; +0027 +0028 if nargin < 2 || isempty(Ptot) +0029 Ptot = params.Ptot; +0030 disp(['Total protein content used: ' num2str(Ptot) ' [g protein/gDw]']) +0031 end +0032 +0033 % Convert Ptot to mg/gDW if provided in g/gDCW (which is default) +0034 if Ptot < 1 +0035 Ptot = Ptot * 1000; +0036 end +0037 +0038 Pmeas = sum(ecModel.ec.concs,'omitnan'); +0039 if Pmeas == 0 +0040 error('The model has not yet been constrained with proteomics, as ecModel.ec.concs is empty.') +0041 end +0042 +0043 Pnew = (Ptot - Pmeas) * params.f; +0044 +0045 if Pnew > 0 +0046 PoolRxnIdx = strcmp(ecModel.rxns,'prot_pool_exchange'); +0047 ecModel.lb(PoolRxnIdx) = -Pnew*params.sigma; +0048 sol = solveLP(ecModel); +0049 if isempty(sol.x) +0050 error(['Estimating the remaining protein pool by subtracting the ' ... +0051 'sum of measured enzyme concentrations (in ecModel.ec.concs) ' ... +0052 'from the total protein pool (Ptot) does not yield a functional ' ... +0053 'model.']) +0054 end +0055 else +0056 error('The total measured protein mass exceeds the total protein content.') +0057 end +0058 end
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\ No newline at end of file diff --git a/doc/src/geckomat/model_adapter/ModelAdapterManager.html b/doc/src/geckomat/model_adapter/ModelAdapterManager.html index a3a4c950c..f1bc82a25 100644 --- a/doc/src/geckomat/model_adapter/ModelAdapterManager.html +++ b/doc/src/geckomat/model_adapter/ModelAdapterManager.html @@ -76,42 +76,35 @@

SOURCE CODE ^end 0032 adapter = feval(adapterClassName); -0033 % pathsToAdd = GECKOInstaller.GetFilteredSubPaths(fullfile(adapter.params.path,'code'),''); -0034 % status=checkFunctionUniqueness(pathsToAdd); -0035 % if ~status -0036 % error(['Either remove the duplicate function(s) (from MATLAB path), '... -0037 % 'or rename the respective function(s) in the adapter code folder.']) -0038 % end -0039 % addpath(pathsToAdd) -0040 end -0041 -0042 function out = getDefault() -0043 out = ModelAdapterManager.setGetDefault(); -0044 end -0045 -0046 function adapter = setDefault(adapterPath, addToMatlabPath) -0047 if nargin < 1 || isempty(adapterPath) -0048 adapter = ModelAdapterManager.setGetDefault(adapterPath); -0049 return -0050 end -0051 if nargin < 2 -0052 addToMatlabPath = true; -0053 end -0054 adapter = ModelAdapterManager.setGetDefault(ModelAdapterManager.getAdapter(adapterPath, addToMatlabPath)); -0055 end -0056 -0057 end -0058 methods(Static,Access = private) -0059 % This is how they recommend defining static variables in Matlab -0060 function out = setGetDefault(val) -0061 persistent defaultAdapter; %will be empty initially -0062 if nargin -0063 defaultAdapter = val; -0064 end -0065 out = defaultAdapter; -0066 end -0067 end -0068 end +0033 end +0034 +0035 function out = getDefault() +0036 out = ModelAdapterManager.setGetDefault(); +0037 end +0038 +0039 function adapter = setDefault(adapterPath, addToMatlabPath) +0040 if nargin < 1 || isempty(adapterPath) +0041 adapter = ModelAdapterManager.setGetDefault(adapterPath); +0042 return +0043 end +0044 if nargin < 2 +0045 addToMatlabPath = true; +0046 end +0047 adapter = ModelAdapterManager.setGetDefault(ModelAdapterManager.getAdapter(adapterPath, addToMatlabPath)); +0048 end +0049 +0050 end +0051 methods(Static,Access = private) +0052 % This is how they recommend defining static variables in Matlab +0053 function out = setGetDefault(val) +0054 persistent defaultAdapter; %will be empty initially +0055 if nargin +0056 defaultAdapter = val; +0057 end +0058 out = defaultAdapter; +0059 end +0060 end +0061 end
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\ No newline at end of file diff --git a/doc/src/geckomat/utilities/ecFSEOF/ecFlux_scanning.html b/doc/src/geckomat/utilities/ecFSEOF/ecFlux_scanning.html index 881360ae9..190bddf11 100644 --- a/doc/src/geckomat/utilities/ecFSEOF/ecFlux_scanning.html +++ b/doc/src/geckomat/utilities/ecFSEOF/ecFlux_scanning.html @@ -24,16 +24,16 @@

PURPOSE ^ecFlux_scanning

SYNOPSIS ^

-
function FC = ecFlux_scanning(ecModel,target,cSource,alpha,tolerance,filterG)
+
function FC = ecFlux_scanning(ecModel,targetRxn,csRxn,alpha,tolerance,filterG)

DESCRIPTION ^

ecFlux_scanning
 
  Input:
    ecModel         an ecModel in GECKO 3 format (with ecModel.ec structure).
-   rxnTarget       rxn ID for the production target reaction, a exchange
+   targetRxn       rxn ID for the production target reaction, a exchange
                    reaction is recommended.
-  cSource          rxn ID for the main carbon source uptake reaction.
+   csRxn           rxn ID for the main carbon source uptake reaction.
    alpha           scalling factor for production yield for enforced objective
                    limits
    tolerance       numerical tolerance for fixing bounds.
@@ -43,7 +43,7 @@ 

DESCRIPTION ^CROSS-REFERENCE INFORMATION ^

@@ -52,20 +52,20 @@

CROSS-REFERENCE INFORMATION ^
 </ul>
 This function is called by:
 <ul style= -
  • run_ecFSEOF run_ecFSEOF
  • +
  • run_ecFSEOF run_ecFSEOF
  • SOURCE CODE ^

    -
    0001 function FC = ecFlux_scanning(ecModel,target,cSource,alpha,tolerance,filterG)
    +
    0001 function FC = ecFlux_scanning(ecModel,targetRxn,csRxn,alpha,tolerance,filterG)
     0002 %ecFlux_scanning
     0003 %
     0004 % Input:
     0005 %   ecModel         an ecModel in GECKO 3 format (with ecModel.ec structure).
    -0006 %   rxnTarget       rxn ID for the production target reaction, a exchange
    +0006 %   targetRxn       rxn ID for the production target reaction, a exchange
     0007 %                   reaction is recommended.
    -0008 %  cSource          rxn ID for the main carbon source uptake reaction.
    +0008 %   csRxn           rxn ID for the main carbon source uptake reaction.
     0009 %   alpha           scalling factor for production yield for enforced objective
     0010 %                   limits
     0011 %   tolerance       numerical tolerance for fixing bounds.
    @@ -75,7 +75,7 @@ 

    SOURCE CODE ^% (Optional, defaul false) 0016 % 0017 % Usage: -0018 % FC = ecFlux_scanning(model,target,cSource,alpha,tolerance,filterG) +0018 % FC = ecFlux_scanning(model,targetRxn,csRxn,alpha,tolerance,filterG) 0019 0020 if nargin < 6 || isempty(filterG) 0021 filterG = false; @@ -86,124 +86,130 @@

    SOURCE CODE ^end 0027 0028 % Simulate WT (100% growth): -0029 [~, FC.flux_WT] = getFluxTarget(ecModel,target,cSource); +0029 [~, FC.flux_WT] = getFluxTarget(ecModel,targetRxn,csRxn); 0030 -0031 % Simulate forced (X% growth and the rest towards product) based on yield: -0032 FC.alpha = alpha; +0031 % Set to zero values which are under solver tolerance +0032 FC.flux_WT(abs(FC.flux_WT) < 1e-8) = 0; 0033 -0034 % Initialize fluxes and K_scores matrices -0035 v_matrix = zeros(length(ecModel.rxns),length(alpha)); -0036 k_matrix = zeros(length(ecModel.rxns),length(alpha)); -0037 for i = 1:length(alpha) -0038 %disp(['Iteration #' num2str(i)]) -0039 [~, FC.flux_MAX] = getFluxTarget(ecModel,target,cSource,alpha(i)); -0040 v_matrix(:,i) = FC.flux_MAX; -0041 k_matrix(:,i) = FC.flux_MAX./FC.flux_WT; -0042 end -0043 -0044 % Take out rxns with no grRule: -0045 withGR = ~cellfun(@isempty,ecModel.grRules); -0046 -0047 % Generate rxn equations: -0048 rxnEqs = constructEquations(ecModel,ecModel.rxns(withGR),true); -0049 v_matrix = v_matrix(withGR,:); -0050 k_matrix = k_matrix(withGR,:); -0051 rxnGeneM = ecModel.rxnGeneMat(withGR,:); -0052 FC.rxns = [ecModel.rxns(withGR),ecModel.rxnNames(withGR),ecModel.grRules(withGR),rxnEqs]; -0053 -0054 % Filter out rxns that are always zero -> k=0/0=NaN: -0055 non_nan = sum(~isnan(k_matrix),2) > 0; -0056 v_matrix = v_matrix(non_nan,:); -0057 k_matrix = k_matrix(non_nan,:); -0058 rxnGeneM = rxnGeneM(non_nan,:); -0059 FC.rxns = FC.rxns(non_nan,:); -0060 -0061 % Replace remaining NaNs with 1s: -0062 k_matrix(isnan(k_matrix)) = 1; -0063 -0064 % Replace any Inf value with 1000 (maximum value is ~700): -0065 k_matrix(k_matrix>1000) = 1000; -0066 -0067 % Filter out values that are inconsistent at different alphas: -0068 always_down = sum(k_matrix <= 1,2) == length(alpha); -0069 always_up = sum(k_matrix >= 1,2) == length(alpha); -0070 -0071 % Identify those reactions with mixed patterns -0072 incons_rxns = always_down + always_up == 0; -0073 -0074 % Identify genes that are linked to "inconsistent rxns" -0075 incons_genes = sum(rxnGeneM(incons_rxns,:),1) > 0; +0034 % Simulate forced (X% growth and the rest towards product) based on yield: +0035 FC.alpha = alpha; +0036 +0037 % Initialize fluxes and K_scores matrices +0038 v_matrix = zeros(length(ecModel.rxns),length(alpha)); +0039 k_matrix = zeros(length(ecModel.rxns),length(alpha)); +0040 for i = 1:length(alpha) +0041 %disp(['Iteration #' num2str(i)]) +0042 [~, FC.flux_MAX] = getFluxTarget(ecModel,targetRxn,csRxn,alpha(i)); +0043 % Set to zero values which are under solver tolerance +0044 FC.flux_MAX(abs(FC.flux_MAX) < 1e-8) = 0; +0045 v_matrix(:,i) = FC.flux_MAX; +0046 k_matrix(:,i) = FC.flux_MAX./FC.flux_WT; +0047 end +0048 +0049 % Take out rxns with no grRule: +0050 withGR = ~cellfun(@isempty,ecModel.grRules); +0051 +0052 % Generate rxn equations: +0053 rxnEqs = constructEquations(ecModel,withGR,true); +0054 v_matrix = v_matrix(withGR,:); +0055 k_matrix = k_matrix(withGR,:); +0056 rxnGeneM = ecModel.rxnGeneMat(withGR,:); +0057 FC.rxns = [ecModel.rxns(withGR),ecModel.rxnNames(withGR),ecModel.grRules(withGR),rxnEqs]; +0058 +0059 % Filter out rxns that are always zero -> k=0/0=NaN: +0060 non_nan = sum(~isnan(k_matrix),2) > 0; +0061 v_matrix = v_matrix(non_nan,:); +0062 k_matrix = k_matrix(non_nan,:); +0063 rxnGeneM = rxnGeneM(non_nan,:); +0064 FC.rxns = FC.rxns(non_nan,:); +0065 +0066 % Replace remaining NaNs with 1s: +0067 k_matrix(isnan(k_matrix)) = 1; +0068 +0069 % Replace any Inf value with 1000 (maximum value is ~700): +0070 k_matrix(k_matrix>1000) = 1000; +0071 k_matrix(k_matrix<-1000) = 1000; +0072 +0073 % Filter out values that are inconsistent at different alphas: +0074 always_down = sum(k_matrix <= 1,2) == length(alpha); +0075 always_up = sum(k_matrix >= 1,2) == length(alpha); 0076 -0077 % Finally, inconsistent reactions are those that are not conected -0078 % to "inconsistent genes" from the original "inconsistent rxns" set -0079 incons_rxns = sum(rxnGeneM(:,incons_genes),2) > 0; -0080 -0081 % Keep results for the consistent rxns exclusively -0082 v_matrix = v_matrix(~incons_rxns,:); -0083 k_matrix = k_matrix(~incons_rxns,:); -0084 rxnGeneM = rxnGeneM(~incons_rxns,:); -0085 FC.rxns = FC.rxns(~incons_rxns,:); +0077 % Identify those reactions with mixed patterns +0078 incons_rxns = always_down + always_up == 0; +0079 +0080 % Identify genes that are linked to "inconsistent rxns" +0081 incons_genes = sum(rxnGeneM(incons_rxns,:),1) > 0; +0082 +0083 % Finally, inconsistent reactions are those that are not conected +0084 % to "inconsistent genes" from the original "inconsistent rxns" set +0085 incons_rxns = sum(rxnGeneM(:,incons_genes),2) > 0; 0086 -0087 % Get median k score across steps -0088 FC.k_rxns = mean(k_matrix,2); -0089 -0090 % Order from highest to lowest median k_score (across alphas) -0091 [~,order] = sort(FC.k_rxns,'descend'); -0092 FC.k_rxns = FC.k_rxns(order,:); -0093 FC.v_matrix = v_matrix(order,:); -0094 FC.k_matrix = k_matrix(order,:); -0095 rxnGeneM = rxnGeneM(order,:); -0096 FC.rxns = FC.rxns(order,:); -0097 -0098 % Create list of remaining genes and filter out any inconsistent score: -0099 % Just those genes that are connected to the remaining rxns are -0100 FC.genes = ecModel.genes(sum(rxnGeneM,1) > 0); -0101 FC.geneNames = ecModel.geneShortNames(sum(rxnGeneM,1) > 0); -0102 FC.k_genes = zeros(size(FC.genes)); -0103 cons_genes = false(size(FC.genes)); -0104 rxnGeneM = rxnGeneM(:,sum(rxnGeneM,1) > 0); -0105 -0106 for i = 1:length(FC.genes) -0107 % Extract all the K_scores (from rxns across alphas) conected to -0108 % each remaining gene -0109 k_set = FC.k_rxns(rxnGeneM(:,i) > 0); -0110 % Check the kind of control that gene i-th exerts over its reactions -0111 always_down = sum(k_set <= (1-tolerance)) == length(k_set); -0112 always_up = sum(k_set >= (1+tolerance)) == length(k_set); -0113 % Evaluate if gene is always exerting either a positive or negative -0114 % control -0115 cons_genes(i) = always_down + always_up == 1; -0116 FC.k_genes(i) = mean(k_set); -0117 end -0118 % Keep "consistent genes" -0119 FC.genes = FC.genes(cons_genes); -0120 FC.geneNames = FC.geneNames(cons_genes); -0121 FC.k_genes = FC.k_genes(cons_genes); -0122 rxnGeneM = rxnGeneM(:,cons_genes); -0123 -0124 if filterG -0125 % Filter any value between mean(alpha) and 1: -0126 unchanged = (FC.k_genes >= mean(alpha) - tolerance) + (FC.k_genes <= 1 + tolerance) == 2; -0127 FC.genes = FC.genes(~unchanged); -0128 FC.geneNames = FC.geneNames(~unchanged); -0129 FC.k_genes = FC.k_genes(~unchanged); -0130 rxnGeneM = rxnGeneM(:,~unchanged); -0131 % Update results for rxns-related fields (remove remaining reactions -0132 % without any associated gene in rxnGeneM) -0133 toKeep = (sum(rxnGeneM,2) > 0); -0134 FC.k_rxns = FC.k_rxns(toKeep,:); -0135 FC.v_matrix = v_matrix(toKeep,:); -0136 FC.k_matrix = k_matrix(toKeep,:); -0137 FC.rxns = FC.rxns(toKeep,:); -0138 end -0139 -0140 % Order from highest to lowest k: -0141 [~,order] = sort(FC.k_genes,'descend'); -0142 FC.genes = FC.genes(order,:); -0143 FC.geneNames = FC.geneNames(order,:); -0144 FC.k_genes = FC.k_genes(order,:); +0087 % Keep results for the consistent rxns exclusively +0088 v_matrix = v_matrix(~incons_rxns,:); +0089 k_matrix = k_matrix(~incons_rxns,:); +0090 rxnGeneM = rxnGeneM(~incons_rxns,:); +0091 FC.rxns = FC.rxns(~incons_rxns,:); +0092 +0093 % Get median k score across steps +0094 FC.k_rxns = mean(k_matrix,2); +0095 +0096 % Order from highest to lowest median k_score (across alphas) +0097 [~,order] = sort(FC.k_rxns,'descend'); +0098 FC.k_rxns = FC.k_rxns(order,:); +0099 FC.v_matrix = v_matrix(order,:); +0100 FC.k_matrix = k_matrix(order,:); +0101 rxnGeneM = rxnGeneM(order,:); +0102 FC.rxns = FC.rxns(order,:); +0103 +0104 % Create list of remaining genes and filter out any inconsistent score: +0105 % Just those genes that are connected to the remaining rxns are +0106 FC.genes = ecModel.genes(sum(rxnGeneM,1) > 0); +0107 FC.geneNames = ecModel.geneShortNames(sum(rxnGeneM,1) > 0); +0108 FC.k_genes = zeros(size(FC.genes)); +0109 cons_genes = false(size(FC.genes)); +0110 rxnGeneM = rxnGeneM(:,sum(rxnGeneM,1) > 0); +0111 +0112 for i = 1:length(FC.genes) +0113 % Extract all the K_scores (from rxns across alphas) conected to +0114 % each remaining gene +0115 k_set = FC.k_rxns(rxnGeneM(:,i) > 0); +0116 % Check the kind of control that gene i-th exerts over its reactions +0117 always_down = sum(k_set <= (1-tolerance)) == length(k_set); +0118 always_up = sum(k_set >= (1+tolerance)) == length(k_set); +0119 % Evaluate if gene is always exerting either a positive or negative +0120 % control +0121 cons_genes(i) = always_down + always_up == 1; +0122 FC.k_genes(i) = mean(k_set); +0123 end +0124 % Keep "consistent genes" +0125 FC.genes = FC.genes(cons_genes); +0126 FC.geneNames = FC.geneNames(cons_genes); +0127 FC.k_genes = FC.k_genes(cons_genes); +0128 rxnGeneM = rxnGeneM(:,cons_genes); +0129 +0130 if filterG +0131 % Filter any value between mean(alpha) and 1: +0132 unchanged = (FC.k_genes >= mean(alpha) - tolerance) + (FC.k_genes <= 1 + tolerance) == 2; +0133 FC.genes = FC.genes(~unchanged); +0134 FC.geneNames = FC.geneNames(~unchanged); +0135 FC.k_genes = FC.k_genes(~unchanged); +0136 rxnGeneM = rxnGeneM(:,~unchanged); +0137 % Update results for rxns-related fields (remove remaining reactions +0138 % without any associated gene in rxnGeneM) +0139 toKeep = (sum(rxnGeneM,2) > 0); +0140 FC.k_rxns = FC.k_rxns(toKeep,:); +0141 FC.v_matrix = v_matrix(toKeep,:); +0142 FC.k_matrix = k_matrix(toKeep,:); +0143 FC.rxns = FC.rxns(toKeep,:); +0144 end 0145 -0146 end

    +0146 % Order from highest to lowest k: +0147 [~,order] = sort(FC.k_genes,'descend'); +0148 FC.genes = FC.genes(order,:); +0149 FC.geneNames = FC.geneNames(order,:); +0150 FC.k_genes = FC.k_genes(order,:); +0151 +0152 end

    Generated by m2html © 2005
    \ No newline at end of file diff --git a/doc/src/geckomat/utilities/ecFSEOF/run_ecFSEOF.html b/doc/src/geckomat/utilities/ecFSEOF/run_ecFSEOF.html index 67c804ec8..abfcbab01 100644 --- a/doc/src/geckomat/utilities/ecFSEOF/run_ecFSEOF.html +++ b/doc/src/geckomat/utilities/ecFSEOF/run_ecFSEOF.html @@ -24,7 +24,7 @@

    PURPOSE ^run_ecFSEOF

    SYNOPSIS ^

    -
    function results = run_ecFSEOF(ecModel,rxnTarget,cSource,alphaLims,Nsteps,file_genes,file_rxns,modelAdapter)
    +
    function results = run_ecFSEOF(ecModel,targetRxn,csRxn,alphaLims,nSteps,file_genes,file_rxns,modelAdapter)

    DESCRIPTION ^

    run_ecFSEOF
    @@ -34,12 +34,12 @@ 

    DESCRIPTION ^DESCRIPTION ^CROSS-REFERENCE INFORMATION ^

    This function calls: +
  • ecFlux_scanning ecFlux_scanning
  • This function is called by:
    @@ -68,7 +68,7 @@

    CROSS-REFERENCE INFORMATION ^
 
 
 <h2><a name=SOURCE CODE ^

    -
    0001 function results = run_ecFSEOF(ecModel,rxnTarget,cSource,alphaLims,Nsteps,file_genes,file_rxns,modelAdapter)
    +
    0001 function results = run_ecFSEOF(ecModel,targetRxn,csRxn,alphaLims,nSteps,file_genes,file_rxns,modelAdapter)
     0002 %run_ecFSEOF
     0003 %
     0004 % Function that runs Flux-scanning with Enforced Objective Function
    @@ -76,12 +76,12 @@ 

    SOURCE CODE ^% 0007 % Input: 0008 % ecModel an ecModel in GECKO 3 format (with ecModel.ec structure). -0009 % rxnTarget rxn ID for the production target reaction, a exchange +0009 % targetRxn rxn ID for the production target reaction, a exchange 0010 % reaction is recommended. -0011 % cSource rxn ID for the main carbon source uptake reaction. +0011 % csRxn rxn ID for the main carbon source uptake reaction. 0012 % alphaLims vector of Minimum and maximum biomass scalling factors for 0013 % enforced objective limits (e.g. [0.5 1]). Max value: 1. -0014 % Nsteps number of steps for suboptimal objective in FSEOF. +0014 % nSteps number of steps for suboptimal objective in FSEOF. 0015 % (Optional, default 16) 0016 % file_genes file name for results output at the genes level. 0017 % (Optional, default output in the model-specific 'output' @@ -95,7 +95,7 @@

    SOURCE CODE ^% the default model adapter) 0026 % 0027 % Usage: -0028 % results = run_ecFSEOF(ecModel,rxnTarget,cSource,alphaLims) +0028 % results = run_ecFSEOF(ecModel,targetRxn,csRxn,alphaLims) 0029 % 0030 0031 if nargin < 8 || isempty(modelAdapter) @@ -114,62 +114,66 @@

    SOURCE CODE ^'output','ecFSEOF_genes.tsv'); 0045 end 0046 -0047 if nargin < 5 || isempty(Nsteps) -0048 Nsteps = 16; +0047 if nargin < 5 || isempty(nSteps) +0048 nSteps = 16; 0049 end 0050 -0051 % Define alpha vector for suboptimal enforced objective values -0052 alphaV = alphaLims(1):((alphaLims(2)-alphaLims(1))/(Nsteps-1)):alphaLims(2); -0053 -0054 % Standardize grRules and rxnGeneMat in model -0055 [grRules,rxnGeneMat] = standardizeGrRules(ecModel,true); -0056 ecModel.grRules = grRules; -0057 ecModel.rxnGeneMat = rxnGeneMat; -0058 -0059 % run FSEOF analysis -0060 results = ecFlux_scanning(ecModel,rxnTarget,cSource,alphaV,1E-4,true); -0061 -0062 % Create gene table: -0063 results.geneTable = cell(length(results.genes),3); -0064 results.geneTable(:,1) = results.genes; -0065 results.geneTable(:,2) = results.geneNames; -0066 results.geneTable(:,3) = num2cell(results.k_genes); -0067 -0068 % Create rxns table (exclude enzyme usage reactions): -0069 toKeep = find(~startsWith(results.rxns(:,1),'usage_prot_')); -0070 results.k_rxns = results.k_rxns(toKeep); -0071 results.k_matrix = results.k_matrix(toKeep,:); -0072 results.v_matrix = results.v_matrix(toKeep,:); -0073 results.rxnsTable = cell(length(results.k_rxns),5); -0074 results.rxnsTable(:,1) = results.rxns(toKeep,1); -0075 results.rxnsTable(:,2) = results.rxns(toKeep,2); -0076 results.rxnsTable(:,3) = num2cell(results.k_rxns); -0077 results.rxnsTable(:,4) = results.rxns(toKeep,3); -0078 results.rxnsTable(:,5) = results.rxns(toKeep,4); -0079 -0080 writetable(cell2table(results.geneTable, ... -0081 'VariableNames', {'gene_IDs' 'gene_names' 'K_score'}), ... -0082 file_genes, ... -0083 'FileType', 'text', ... -0084 'Delimiter', '\t', ... -0085 'QuoteStrings', false); -0086 -0087 writetable(cell2table(results.rxnsTable, ... -0088 'VariableNames', {'rxn_IDs' 'rxnNames' 'K_score' 'grRules' 'rxn_formula'}), ... -0089 file_rxns, ... -0090 'FileType', 'text', ... -0091 'Delimiter', '\t', ... -0092 'QuoteStrings', false); -0093 -0094 disp(['ecFSEOF results stored at: ' newline fileparts(file_genes)]); -0095 -0096 % Remove redundant output fields -0097 results = rmfield(results,'k_rxns'); -0098 results = rmfield(results,'rxns'); -0099 results = rmfield(results,'genes'); -0100 results = rmfield(results,'geneNames'); -0101 results = rmfield(results,'k_genes'); -0102 end

    +0051 if numel(alphaLims) ~= 2 +0052 error('alphaLims parameter should be a vector of two values') +0053 end +0054 +0055 % Define alpha vector for suboptimal enforced objective values +0056 alphaV = alphaLims(1):((alphaLims(2)-alphaLims(1))/(nSteps-1)):alphaLims(2); +0057 +0058 % Standardize grRules and rxnGeneMat in model +0059 [grRules,rxnGeneMat] = standardizeGrRules(ecModel,true); +0060 ecModel.grRules = grRules; +0061 ecModel.rxnGeneMat = rxnGeneMat; +0062 +0063 % run FSEOF analysis +0064 results = ecFlux_scanning(ecModel,targetRxn,csRxn,alphaV,1E-4,true); +0065 +0066 % Create gene table: +0067 results.geneTable = cell(length(results.genes),3); +0068 results.geneTable(:,1) = results.genes; +0069 results.geneTable(:,2) = results.geneNames; +0070 results.geneTable(:,3) = num2cell(results.k_genes); +0071 +0072 % Create rxns table (exclude enzyme usage reactions): +0073 toKeep = find(~startsWith(results.rxns(:,1),'usage_prot_')); +0074 results.k_rxns = results.k_rxns(toKeep); +0075 results.k_matrix = results.k_matrix(toKeep,:); +0076 results.v_matrix = results.v_matrix(toKeep,:); +0077 results.rxnsTable = cell(length(results.k_rxns),5); +0078 results.rxnsTable(:,1) = results.rxns(toKeep,1); +0079 results.rxnsTable(:,2) = results.rxns(toKeep,2); +0080 results.rxnsTable(:,3) = num2cell(results.k_rxns); +0081 results.rxnsTable(:,4) = results.rxns(toKeep,3); +0082 results.rxnsTable(:,5) = results.rxns(toKeep,4); +0083 +0084 writetable(cell2table(results.geneTable, ... +0085 'VariableNames', {'gene_IDs' 'gene_names' 'K_score'}), ... +0086 file_genes, ... +0087 'FileType', 'text', ... +0088 'Delimiter', '\t', ... +0089 'QuoteStrings', false); +0090 +0091 writetable(cell2table(results.rxnsTable, ... +0092 'VariableNames', {'rxn_IDs' 'rxnNames' 'K_score' 'grRules' 'rxn_formula'}), ... +0093 file_rxns, ... +0094 'FileType', 'text', ... +0095 'Delimiter', '\t', ... +0096 'QuoteStrings', false); +0097 +0098 disp(['ecFSEOF results stored at: ' newline fileparts(file_genes)]); +0099 +0100 % Remove redundant output fields +0101 results = rmfield(results,'k_rxns'); +0102 results = rmfield(results,'rxns'); +0103 results = rmfield(results,'genes'); +0104 results = rmfield(results,'geneNames'); +0105 results = rmfield(results,'k_genes'); +0106 end

    Generated by m2html © 2005
    \ No newline at end of file diff --git a/doc/src/geckomat/utilities/getFluxTarget.html b/doc/src/geckomat/utilities/getFluxTarget.html index 6d1bdb2f8..73cbb88dc 100644 --- a/doc/src/geckomat/utilities/getFluxTarget.html +++ b/doc/src/geckomat/utilities/getFluxTarget.html @@ -24,7 +24,7 @@

    PURPOSE ^getFluxTarget

    SYNOPSIS ^

    -
    function [minFlux, maxFlux] = getFluxTarget(ecModel,target,cSource,alpha,tolerance,modelAdapter)
    +
    function [minFlux, maxFlux] = getFluxTarget(ecModel,targetRxn,csRxn,alpha,tolerance,modelAdapter)

    DESCRIPTION ^

    getFluxTarget
    @@ -37,13 +37,13 @@ 

    DESCRIPTION ^DESCRIPTION ^CROSS-REFERENCE INFORMATION ^

    @@ -69,7 +69,7 @@

    CROSS-REFERENCE INFORMATION ^
 
 
 <h2><a name=SOURCE CODE ^

    -
    0001 function [minFlux, maxFlux] = getFluxTarget(ecModel,target,cSource,alpha,tolerance,modelAdapter)
    +
    0001 function [minFlux, maxFlux] = getFluxTarget(ecModel,targetRxn,csRxn,alpha,tolerance,modelAdapter)
     0002 %getFluxTarget
     0003 %
     0004 %   Function that performs a series of LP optimizations on an ecModel,
    @@ -80,13 +80,13 @@ 

    SOURCE CODE ^% 0010 % Input: 0011 % ecModel an ecModel in GECKO 3 format (with ecModel.ec structure). -0012 % target rxn ID for the production target reaction, a exchange +0012 % targetRxn rxn ID for the production target reaction, a exchange 0013 % reaction is recommended. -0014 % cSource rxn ID for the main carbon source uptake reaction. +0014 % csRxn rxn ID for the main carbon source uptake reaction. 0015 % alpha scalling factor for desired suboptimal growth. -0016 % (Optional, defaul 1) +0016 % (Optional, default 1) 0017 % tolerance numerical tolerance for fixing bounds -0018 % (Optional, defaul 1E-8) +0018 % (Optional, default 1E-6) 0019 % modelAdapter a loaded model adapter. (Optional, will otherwise use 0020 % the default model adapter) 0021 % @@ -97,7 +97,7 @@

    SOURCE CODE ^% corresponding to model.rxns 0027 % 0028 % Usage: -0029 % [minFlux, maxFlux] = simulateGrowth(model,target,C_source,alpha,tol) +0029 % [minFlux, maxFlux] = simulateGrowth(ecModel,targetRxn,csRxn,alpha,tol) 0030 0031 if nargin < 6 || isempty(modelAdapter) 0032 modelAdapter = ModelAdapterManager.getDefault(); @@ -108,7 +108,7 @@

    SOURCE CODE ^if nargin < 5 || isempty(tolerance) -0040 tolerance = 1E-8; +0040 tolerance = 1E-6; 0041 end 0042 0043 if nargin < 4 || isempty(alpha) @@ -116,12 +116,12 @@

    SOURCE CODE ^end 0046 0047 % Fix carbon source uptake -0048 cSourceIdx = strcmpi(ecModel.rxns,cSource); -0049 uptake = ecModel.lb(cSourceIdx); +0048 csRxnIdx = strcmpi(ecModel.rxns,csRxn); +0049 uptake = ecModel.lb(csRxnIdx); 0050 0051 % Check if a carbon source uptake rate have been defined 0052 if uptake ~= -1000 -0053 ecModel = setParam(ecModel, 'var', cSource, uptake, tolerance); +0053 ecModel = setParam(ecModel, 'var', csRxn, uptake, tolerance); 0054 0055 % Maximize growth 0056 ecModel = setParam(ecModel, 'obj', params.bioRxn, 1); @@ -131,10 +131,10 @@

    SOURCE CODE ^'obj', params.bioRxn, 1); 0061 sol = solveLP(ecModel, 1); 0062 -0063 ecModel = setParam(ecModel, 'var', cSource, sol.x(cSourceIdx), tolerance); +0063 ecModel = setParam(ecModel, 'var', csRxn, sol.x(csRxnIdx), tolerance); 0064 0065 warning(['The maximum uptake rate for the carbon source is -1000. ' ... -0066 num2str(abs(sol.x(cSourceIdx))) ' [mmol/gDW/h] was used instead']) +0066 num2str(abs(sol.x(csRxnIdx))) ' [mmol/gDW/h] was used instead']) 0067 end 0068 0069 % Fix growth suboptimal @@ -148,12 +148,12 @@

    SOURCE CODE ^'lb', 'prot_pool_exchange', sol.x(poolIdx) * (1+tolerance)); 0078 0079 % Minimize target -0080 ecModel = setParam(ecModel, 'obj', target, -1); +0080 ecModel = setParam(ecModel, 'obj', targetRxn, -1); 0081 sol = solveLP(ecModel); 0082 minFlux = sol.x; 0083 0084 % Maximize target -0085 ecModel = setParam(ecModel, 'obj', target, 1); +0085 ecModel = setParam(ecModel, 'obj', targetRxn, 1); 0086 sol = solveLP(ecModel); 0087 maxFlux = sol.x; 0088 diff --git a/doc/src/geckomat/utilities/index.html b/doc/src/geckomat/utilities/index.html index 6ac4c59a8..de2fe64d4 100644 --- a/doc/src/geckomat/utilities/index.html +++ b/doc/src/geckomat/utilities/index.html @@ -19,7 +19,7 @@

    Index for src\geckomat\utilities

    Matlab files in this directory:

    -
     ecFVAecFVA
     enzymeUsageenzymeUsage
     findGECKOrootfindGECKOroot
     getFluxTargetgetFluxTarget
     loadConventionalGEMloadConventionalGEM
     loadEcModelloadEcModel
     loadFluxDataloadFluxData
     loadProtDataloadProtData
     mapRxnsToConvmapRxnsToConv
     reportEnzymeUsagereportEnzymeUsage
     saveEcModelsaveECmodel
     startGECKOprojectstartGECKOproject
     updateGECKOdocupdateGeckoDoc
    + 
    ecFVAecFVA  enzymeUsageenzymeUsage  findGECKOrootfindGECKOroot  getFluxTargetgetFluxTarget  loadConventionalGEMloadConventionalGEM  loadEcModelloadEcModel  loadFluxDataloadFluxData  loadProtDataloadProtData  mapRxnsToConvmapRxnsToConv  plotEcFVAplotEcFVA  reportEnzymeUsagereportEnzymeUsage  saveEcModelsaveECmodel  startGECKOprojectstartGECKOproject  updateGECKOdocupdateGeckoDoc

    Subsequent directories:

    diff --git a/doc/src/geckomat/utilities/plotEcFVA.html b/doc/src/geckomat/utilities/plotEcFVA.html new file mode 100644 index 000000000..d356c40e2 --- /dev/null +++ b/doc/src/geckomat/utilities/plotEcFVA.html @@ -0,0 +1,91 @@ + + + + Description of plotEcFVA + + + + + + + + + +
    Home > src > geckomat > utilities > plotEcFVA.m
    + + + +

    plotEcFVA +

    + +

    PURPOSE ^

    +
    plotEcFVA
    + +

    SYNOPSIS ^

    +
    function plotEcFVA(minFlux, maxFlux)
    + +

    DESCRIPTION ^

    +
     plotEcFVA
    +   Plots cumulative distribution functions of ecFVA results from one or
    +   model ecModel(s) and/or GEM(s).
    +
    + Input:
    +   minFlux     vector of minimum flux values, coming from ecFVA. If
    +               multiple ecModels/GEMs are to be visualized, then each
    +               column represents a separate model.
    +   maxFlux     vector of maximum flux values, matching minFlux.
    + + +

    CROSS-REFERENCE INFORMATION ^

    +This function calls: +
      +
    +This function is called by: +
      +
    + + + + +

    SOURCE CODE ^

    +
    0001 function plotEcFVA(minFlux, maxFlux)
    +0002 % plotEcFVA
    +0003 %   Plots cumulative distribution functions of ecFVA results from one or
    +0004 %   model ecModel(s) and/or GEM(s).
    +0005 %
    +0006 % Input:
    +0007 %   minFlux     vector of minimum flux values, coming from ecFVA. If
    +0008 %               multiple ecModels/GEMs are to be visualized, then each
    +0009 %               column represents a separate model.
    +0010 %   maxFlux     vector of maximum flux values, matching minFlux.
    +0011 
    +0012 numMods = size(minFlux,2);
    +0013 
    +0014 % Ignore zero flux reactions
    +0015 for i=1:numMods
    +0016     zeroFlux = abs(minFlux(:,i)) < 1e-10 & abs(maxFlux(:,i)) < 1e-10;
    +0017     minFlux(zeroFlux,i) = NaN;
    +0018     maxFlux(zeroFlux,i) = NaN;
    +0019 end
    +0020 
    +0021 % Calculate flux ranges
    +0022 fluxRange = maxFlux - minFlux;
    +0023 
    +0024 % Plot all together
    +0025 hold on
    +0026 legendText = cell(1,numel(numMods));
    +0027 for i=1:numMods
    +0028     cdfplot(fluxRange(:,i))
    +0029     legendText{i} = (['Model #' num2str(i) ' (median: ' num2str(median(fluxRange(:,i),'omitnan')) ')']);
    +0030 end
    +0031 set(gca, 'XScale', 'log', 'Xlim', [1e-7 1e4])
    +0032 set(findall(gca, 'Type', 'Line'), 'LineWidth', 2)
    +0033 legend(legendText,  'Location','northwest')
    +0034 title('Flux variability (cumulative distribution)');
    +0035 xlabel('Variability range (mmol/gDCWh)');
    +0036 ylabel('Cumulative distribution');
    +
    Generated by m2html © 2005
    + + \ No newline at end of file From 93dec5fa1beeb702a4609a1385b0715174b9fbcb Mon Sep 17 00:00:00 2001 From: edkerk Date: Tue, 27 Jun 2023 00:44:29 +0200 Subject: [PATCH 4/9] fix: remove old ecFVA.tsv no purpose to write this file --- tutorials/full_ecModel/output/ecFVA.tsv | 4064 ----------------------- 1 file changed, 4064 deletions(-) delete mode 100644 tutorials/full_ecModel/output/ecFVA.tsv diff --git a/tutorials/full_ecModel/output/ecFVA.tsv b/tutorials/full_ecModel/output/ecFVA.tsv deleted file mode 100644 index f6354f8e9..000000000 --- a/tutorials/full_ecModel/output/ecFVA.tsv +++ /dev/null @@ -1,4064 +0,0 @@ -rxnIDs rxnNames minFlux maxFlux ec-minFlux ec-maxFlux -r_0001 (R)-lactate:ferricytochrome-c 2-oxidoreductase 0 0.1452 0 0.0851842 -r_0002 (R)-lactate:ferricytochrome-c 2-oxidoreductase 0 0.1452 0 0.107696 -r_0003 (R,R)-butanediol dehydrogenase -0.0329493 0 0 -0.0329493 -r_0004 (S)-lactate:ferricytochrome-c 2-oxidoreductase 0 0.124457 0 0.0461553 -r_0005 1,3-beta-glucan synthase 0.0658693 0.0676095 0.0262429 0.0997248 -r_0006 1,6-beta-glucan synthase 0.0220081 0.0225895 0 0.044355 -r_0007 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase 0.00670183 0.0282728 0.00670183 0.0173331 -r_0012 1-pyrroline-5-carboxylate dehydrogenase 0 0.1452 0 0.0176738 -r_0013 2,3-diketo-5-methylthio-1-phosphopentane degradation reaction 1.672e-05 0.040151 1.672e-05 0.000160873 -r_0014 2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate deaminase 8.8e-05 9.03249e-05 8.8e-05 8.86775e-05 -r_0015 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase (NADPH) 8.8e-05 9.03249e-05 8.8e-05 8.86775e-05 -r_0016 2-aceto-2-hydroxybutanoate synthase 0.0194788 0.0436341 0 0.0872682 -r_0017 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 0 5.72659e-06 0 5.62216e-06 -r_0018 2-aminoadipate transaminase 0.0289301 0.0501544 0 0.0583056 -r_0019 2-dehydropantoate 2-reductase 1.672e-05 0.011911 1.672e-05 0.000160873 -r_0020 2-deoxy-D-arabino-heptulosonate 7-phosphate synthetase 0 0.0760456 0 0.0745531 -r_0021 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase 0 0 0 3.38749e-10 -r_0022 2-hexaprenyl-6-methoxyphenol monooxygenase 0 0 0 3.38749e-10 -r_0023 2-isopropylmalate hydratase -0.0544929 -0.0299611 -0.0299611 -0.0544929 -r_0024 2-isopropylmalate synthase 0 0.0512955 0 0.0812566 -r_0025 2-isopropylmalate synthase 0 0.0544929 0 0.0544929 -r_0026 2-keto-4-methylthiobutyrate transamination 0 0.040151 0 0.000513769 -r_0027 2-methylcitrate dehydratase 0.0289301 0.0501544 0.0289301 0.0291528 -r_0028 2-methylcitrate synthase 0 0.0559751 0 0.0184808 -r_0029 2-oxo-4-methyl-3-carboxypentanoate decarboxylation 0.0299611 0.0544929 0.0299611 0.0544929 -r_0030 2-oxo-4-methyl-3-carboxypentanoate decarboxylation 0 0 0 0 -r_0032 3',5'-bisphosphate nucleotidase 0 0.138525 0 0.0564471 -r_0033 3',5'-cyclic-nucleotide phosphodiesterase 0 0.17424 0 0.0646174 -r_0034 3',5'-cyclic-nucleotide phosphodiesterase 0 0 0 0 -r_0035 3',5'-cyclic-nucleotide phosphodiesterase 0 0 0 0 -r_0036 3',5'-cyclic-nucleotide phosphodiesterase 0 0 0 0 -r_0037 3',5'-cyclic-nucleotide phosphodiesterase 0 0 0 0 -r_0038 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.000176 0.00018065 0.000176 0.000177355 -r_0039 3-dehydroquinate dehydratase 0.0369917 0.0760456 0.0369917 0.0372765 -r_0040 3-dehydroquinate synthase 0.0369917 0.0760456 0.0369917 0.0372765 -r_0041 3-dehydrosphinganine reductase 0 0 0 0 -r_0042 3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase 0 0.0708652 0 0.0742683 -r_0043 3-hexaprenyl-4,5-dihydroxybenzoate hydroxylase 0 0 0 3.38749e-10 -r_0044 3-hexaprenyl-4-hydroxy-5-methoxybenzoate decarboxylase 0 0 0 3.38749e-10 -r_0045 3-hydroxy-L-kynurenine hydrolase 0.0102698 0.0137972 0.0102698 0.0103489 -r_0057 3-hydroxyacyl-CoA dehydrogenase (3-oxotetradecanoyl-CoA) 0 0.0738428 0 0.00597951 -r_0058 3-hydroxyanthranilate 3,4-dioxygenase 0.0102698 0.0137972 0.0102698 0.0103489 -r_0059 3-isopropylmalate 3-methyltransferase 0 0 0 0 -r_0060 3-isopropylmalate dehydratase -0.0544929 -0.0299611 -0.0299611 -0.0544929 -r_0061 3-isopropylmalate dehydrogenase 0.0299611 0.0544929 0.0299611 0.0544929 -r_0062 3-methyl-2-oxobutanoate decarboxylase 0 0.0316254 0 0.0830135 -r_0063 3-methyl-2-oxobutanoate hydroxymethyltransferase 1.672e-05 0.011911 1.672e-05 0.000160873 -r_0064 3-methyl-2-oxopentanoate decarboxylase 0 0.0241553 0 0.0483106 -r_0065 3-phosphoshikimate 1-carboxyvinyltransferase 0.0369917 0.0760456 0.0369917 0.0372765 -r_0066 4-amino-4-deoxychorismate synthase 5.5792e-06 0.0196415 5.5792e-06 5.88491e-06 -r_0067 4-aminobenzoate synthase 5.5792e-06 0.0196415 5.5792e-06 5.88491e-06 -r_0068 4-aminobutyrate transaminase 1.056e-07 0.435599 1.056e-07 0.05266 -r_0069 4-hydroxy-L-threonine synthase 0 0 0 0 -r_0070 4-hydroxybenzoate formation 0 0 0 0 -r_0072 4-methyl-2-oxopentanoate decarboxylase 0 0.0245317 0 0.0245317 -r_0073 4PP-IP5 depyrophosphorylation to IP6 0 0 0 0 -r_0074 4PP-IP5 pyrophosphorylation to 4,5-PP2-IP4 0 0 0 0 -r_0075 5'-methylthioadenosine phosphorylase 1.672e-05 0.040151 1.672e-05 0.000160873 -r_0076 5'-nucleotidase (CMP) 0 0.290399 0 0.107696 -r_0077 5'-nucleotidase (IMP) 0 0.290399 0 0.107696 -r_0078 5'-nucleotidase (UMP) 0 0.290399 0 0.107696 -r_0079 5'-phosphoribosylformyl glycinamidine synthetase 0.0187472 0.0449313 0.0187472 0.027536 -r_0080 5,10-methylenetetrahydrofolate reductase (NADPH) 0.017364 0.0642401 0 0.0442938 -r_0081 5-aminolevulinate synthase 7.04e-07 7.22599e-07 7.04e-07 7.0942e-07 -r_0082 5-diphosphoinositol-1,2,3,4,6-pentakisphosphate diphosphohydrolase 0 0.290399 0 0.0484783 -r_0083 5-diphosphoinositol-1,2,3,4,6-pentakisphosphate synthase 0 0.290399 0 0.0484783 -r_0084 5-formethyltetrahydrofolate cyclo-ligase 0 0 0 0 -r_0085 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase 0 0 0 0 -r_0086 5-methylthio-5-deoxy-D-ribulose 1-phosphate dehydratase 1.672e-05 0.040151 1.672e-05 0.000160873 -r_0087 5-methylthioribose-1-phosphate isomerase 1.672e-05 0.040151 1.672e-05 0.000160873 -r_0088 5PP-IP5 pyrophosphorylation to 4,5-PP2-IP4 0 0 0 0 -r_0089 5PP-IP5 pyrophosphorylation to 5,6-PP2-IP4 0 0.1452 0 0.0238233 -r_0090 6-phosphofructo-2-kinase 0 0.290399 0 0.0149401 -r_0091 6-phosphogluconolactonase 0 2.37778 0.685283 1.39083 -r_0092 6PP-IP5 depyrophosphorylation to IP6 0 0 0 0 -r_0093 6PP-IP5 pyrophosphorylation to 5,6-PP2-IP4 0 0 0 0 -r_0094 8-amino-7-oxononanoate synthase 0 0 0 0 -r_0095 acetaldehyde condensation 0 0.0329493 0 0.0920764 -r_0096 acetohydroxy acid isomeroreductase 0.0567245 0.08835 0.0567245 0.08835 -r_0097 acetolactate synthase 0.0567245 0.08835 0 0.1767 -r_0099 acetyl-CoA ACP transacylase 0 0 0 0 -r_0100 acetyl-CoA C-acyltransferase (palmitoyl-CoA) 0 0.0738428 0 0.00585046 -r_0101 acetyl-CoA C-acyltransferase (tetracosanoyl-CoA) 0 0.0157849 0 0.00199864 -r_0102 acetyl-CoA C-acyltransferase (myristoyl-CoA) 0 0.0738428 0 0.00612361 -r_0103 acetyl-CoA C-acetyltransferase -0.0354813 0.0370953 0 0.0193367 -r_0104 acetyl-CoA C-acetyltransferase 0 0.0432618 0 0.0196215 -r_0105 acetyl-CoA C-acyltransferase (lauroyl-CoA) 0 0.0738428 0 0.00597951 -r_0106 acetyl-CoA C-acyltransferase (octanoyl-CoA) 0 0.0111585 0 0.00573448 -r_0107 acetyl-CoA C-acyltransferase (decanoyl-CoA) 0 0.0111585 0 0.00568599 -r_0108 acetyl-Coa carboxylase 0 0 0 0 -r_0109 acetyl-CoA carboxylase, reaction 0.104189 0.184296 0.104189 0.145112 -r_0111 acetyl-CoA hydrolase 0 0.290399 0 0.107696 -r_0112 acetyl-CoA synthetase 0.0527482 0.346378 0 0.417786 -r_0113 acetyl-CoA synthetase 0 0.290399 0 0.107696 -r_0114 acetyl-CoA synthetase nuclear 0 0 0 0 -r_0115 acetylglutamate kinase 0.0162441 0.178092 0.0162441 0.0198482 -r_0116 acid phosphatase (secreted) 0 0 0 0 -r_0117 aconitase 0 0.0559751 0 0.0184808 -r_0118 acteylornithine transaminase 0.0162441 0.178092 0.0162441 0.0198482 -r_0119 acyl carrier protein synthase 0 0.0871198 0 0.0208824 -r_0120 acyl-CoA oxidase (decanoyl-CoA) 0 0.0111585 0 0.00568599 -r_0121 acyl-CoA oxidase (dodecanoyl-CoA) 0 0.0111585 0 0.00567961 -r_0122 acyl-CoA oxidase (hexacosanoyl-CoA) 0 0.0157849 0 0.00199864 -r_0123 acyl-CoA oxidase (hexadecanoyl-CoA) 0 0.0738428 0 0.00612361 -r_0124 acyl-CoA oxidase (octadecanoyl-CoA) 0 0.0738428 0 0.00585046 -r_0125 acyl-CoA oxidase (tetradecanoyl-CoA) 0 0.0738428 0 0.00597951 -r_0126 acyl-CoA:sterol acyltransferase (oleoyl-CoA:episterol), ER membrane 0 0.17424 0 0 -r_0127 acyl-CoA:sterol acyltransferase (oleoyl-CoA:ergosterol), ER membrane 0 0.175145 0 0.0125135 -r_0128 acyl-CoA:sterol acyltransferase (oleoyl-CoA:fecosterol), ER membrane 0 0.17424 0 0 -r_0129 acyl-CoA:sterol acyltransferase (oleoyl-CoA:lanosterol), ER membrane 0 0.17424 0 0.00535082 -r_0130 acyl-CoA:sterol acyltransferase (oleoyl-CoA:zymosterol), ER membrane 0 0.17424 0 0 -r_0131 acyl-CoA:sterol acyltransferase (palmitoleoyl-CoA:episterol), ER membrane 0 0.17424 0 0 -r_0132 acyl-CoA:sterol acyltransferase (palmitoleoyl-CoA:ergosterol), ER membrane 0 0.17424 -1.65212e-12 0.000535267 -r_0133 acyl-CoA:sterol acyltransferase (palmitoleoyl-CoA:fecosterol), ER membrane 0 0.17424 0 0 -r_0134 acyl-CoA:sterol acyltransferase (palmitoleoyl-CoA:lanosterol), ER membrane 0 0.17424 0 0 -r_0135 acyl-CoA:sterol acyltransferase (palmitoleoyl-CoA:zymosterol), ER membrane 0 0.17424 0 0 -r_0137 acylation of GPI inositol at 2 position, GPI-anchor assembly, step 3 0 0 0 0 -r_0138 adenine deaminase 0 0.0367637 0 0.000160873 -r_0139 adenine phosphoribosyltransferase 0 0.040151 0 0.000321746 -r_0140 adenosine deaminase 0 0.129742 0 0.00821445 -r_0142 adenosine kinase 0 0.302731 0.00405243 0.120027 -r_0143 adenosine monophosphate deaminase 0 0.217799 0 0.055072 -r_0144 adenosylhomocysteinase 0.012239 0.121235 0.0122669 0.0126028 -r_0145 adenosylmethionine decarboxylase 1.672e-05 0.040151 1.672e-05 0.000160873 -r_0146 adenosylmethionine-8-amino-7-oxononanoate transaminase 0 0 0 0 -r_0147 adenylate cyclase 0 0.17424 0 0.0646174 -r_0148 adenylate kinase 0.62399 0.949893 0 1.53438 -r_0149 adenylate kinase 0 0.290399 0 0.107696 -r_0150 adenylate kinase (GTP) 0 0.217799 0 0.0415949 -r_0151 adenylosuccinate lyase (AICAR) 0.0187471 0.0449312 0.0187471 0.0275359 -r_0152 adenylosuccinate lyase 0.0212251 0.239033 0.0212251 0.0762971 -r_0153 adenylosuccinate synthase 0.0212251 0.239033 0.0212251 0.0762971 -r_0154 adenylyl-sulfate kinase 0.00580891 0.138525 0.00580891 0.0544392 -r_0155 ADP-ribose 2,3-cyclic phosphodiesterase 0 0 0 0 -r_0156 alanine glyoxylate aminotransferase 0 0.448831 0 0.0941428 -r_0157 alanyl-tRNA synthetase 0.0463771 0.0476023 0.0463771 0.0467342 -r_0158 alcohol acetyltransferase (2-methylbutanol) 0 0.0172687 0 0.0172687 -r_0159 alcohol acetyltransferase (ethanol) 0 0.17571 0 0.0672352 -r_0160 alcohol acetyltransferase (isoamyl alcohol) 0 0.17424 0 0.0646174 -r_0161 alcohol acetyltransferase (isobutyl alcohol) 0 0.17424 0 0.129235 -r_0162 alcohol acetyltransferase (phenylethanol alcohol) 0 0.012783 0 0.000284804 -r_0163 alcohol dehydrogenase (ethanol to acetaldehyde) 0 1000 0 661.406 -r_0164 alcohol dehydrogenase (glycerol, NADP) 0 0 0 0 -r_0165 mitochondrial alcohol dehydrogenase 0 1000 0 7.1023 -r_0166 aldehyde dehydrogenase (2-methylbutanol, NAD) 0 0.0228252 0 0.0331154 -r_0167 aldehyde dehydrogenase (2-methylbutanol, NAD) 0 0.0228252 0 0.0335774 -r_0168 aldehyde dehydrogenase (2-methylbutanol, NADP) 0 0.0224989 0 0.0224989 -r_0169 aldehyde dehydrogenase (2-phenylethanol, NAD) 0 0.0155928 0 0.000569608 -r_0170 aldehyde dehydrogenase (2-phenylethanol, NAD) 0 0.0155928 0 0.000284804 -r_0171 aldehyde dehydrogenase (2-phenylethanol, NADP) 0 0.0154399 0 0.000284804 -r_0172 aldehyde dehydrogenase (3-aminopropanal, NAD) 1.672e-05 0.040151 0 0.000482619 -r_0173 aldehyde dehydrogenase (acetaldehyde, NADP) 0 0.432058 0 0.295031 -r_0174 aldehyde dehydrogenase (acetylaldehyde, NAD) 0 0.290399 0 0.107696 -r_0175 aldehyde dehydrogenase (acetylaldehyde, NADP) 0 0.176341 0 0.103894 -r_0176 aldehyde dehydrogenase (indole-3-acetaldehyde, NAD) 0 0 0 0 -r_0177 aldehyde dehydrogenase (indole-3-acetaldehyde, NADP) 0 0 0 0 -r_0178 aldehyde dehydrogenase (indole-3-acetaldehyde, NADP) 0 0 0 0 -r_0179 aldehyde dehydrogenase (isoamyl alcohol, NAD) 0 0.023161 0 0.0406212 -r_0180 aldehyde dehydrogenase (isoamyl alcohol, NAD) 0 0.023161 0 0.0379462 -r_0181 aldehyde dehydrogenase (isoamyl alcohol, NADP) 0 0.0228252 0 0.0228252 -r_0182 aldehyde dehydrogenase (isobutyl alcohol, NAD) 0 0.0293835 0 0.0372254 -r_0183 aldehyde dehydrogenase (isobutyl alcohol, NAD) 0 0.0293835 0 0.058767 -r_0184 aldehyde dehydrogenase (isobutyl alcohol, NADP) 0 0.0288451 0 0.0288451 -r_0185 aldehyde dehydrogenase (phenylacetaldehyde, NAD) 0 0 0 0 -r_0186 aldehyde dehydrogenase (tryptophol, NAD) 0 0.0122649 0 0.000101171 -r_0187 aldehyde dehydrogenase (tryptophol, NAD) 0 0.0122649 0 0.000101171 -r_0188 alkaline phosphatase (dihydroneopterin) 0 5.7266e-06 0 5.62216e-06 -r_0189 allantoate amidinohydrolase 0 0 0 0 -r_0190 allantoinase, reaction 0 0 0 0 -r_0191 allophanate hydrolase 0 0.0483999 0 0.0010613 -r_0192 alpha 1,2-mannosyltransferase 0 0 0 0 -r_0193 alpha,alpha-trehalase 0 0.1089 0 0.0403859 -r_0194 alpha,alpha-trehalase 0 0.1089 0 0.0403859 -r_0195 alpha,alpha-trehalose-phosphate synthase (UDP-forming) 0.0121683 0.121068 0 0.105108 -r_0198 alpha-glucosidase 0 0 0 0 -r_0199 amidase 0 0 0 0 -r_0200 Aminoacetone:oxygen oxidoreductase(deaminating)(flavin-containing) 0 0 0 0 -r_0201 Aminobutyraldehyde dehydrogenase 0 0.435599 0 0.161544 -r_0202 anthranilate phosphoribosyltransferase 0.0131406 0.0575985 0.0131406 0.0132417 -r_0203 anthranilate synthase 0.0131406 0.0257795 0.0131406 0.0132417 -r_0204 Ap4A hydrolase 0 0.290399 0 0.107696 -r_0205 arabinose reductase 0 0 0 0 -r_0206 arginase 0 0.0580799 0 0.0010613 -r_0207 argininosuccinate lyase 0.0162441 0.074324 0.0162441 0.0209095 -r_0208 argininosuccinate synthase 0.0162441 0.074324 0.0162441 0.0209095 -r_0209 arginyl-tRNA synthetase 0.0162441 0.0166733 0.0162441 0.0163692 -r_0210 arginyl-tRNA synthetase 0 0 0 0 -r_0211 asparagine synthase (glutamine-hydrolysing) 0.0102802 0.11918 0.0024251 0.0182628 -r_0212 Asparaginyl-tRNA synthetase 0.0102802 0.0105518 0.0102802 0.0103593 -r_0213 asparaginyl-tRNA synthetase, miotchondrial 0 0 0 0 -r_0214 aspartate carbamoyltransferase 0.00943961 0.0261923 0.00943961 0.014191 -r_0215 aspartate kinase 0.0244724 0.154495 0.0244724 0.0737499 -r_0216 aspartate transaminase -0.348289 999.912 0 0.116836 -r_0217 aspartate transaminase 0 1000 0 0.72291 -r_0218 aspartate transaminase -0.0686089 0.0198045 0 -0.0311737 -r_0219 aspartate-semialdehyde dehydrogenase 0.0244724 0.154495 0.0244724 0.0737499 -r_0220 Aspartyl-tRNA synthetase 0.0300723 0.0308668 0.0300723 0.0303039 -r_0221 Aspartyl-tRNA synthetase 0 0 0 0 -r_0222 ATP adenylyltransferase 0 0.290399 0 0.107696 -r_0223 ATP adenylyltransferase 0 0 0 0 -r_0224 ATP adenylyltransferase 0 0 0 0 -r_0225 ATP phosphoribosyltransferase 0.00670183 0.0282728 0.00670183 0.0173331 -r_0226 ATP synthase 5.76005 7.96844 6.62617 6.89317 -r_0227 ATPase, cytosolic 0 0.410359 0 0.319209 -r_0228 beta-1,4 mannosyltransferase 0 0 0 0 -r_0229 biotin synthase 0 0 0 0 -r_0230 biotin-[acetyl-CoA-carboxylase] ligase 0 0 0 0 -r_0231 C-14 sterol reductase 0.00324521 0.00663783 0.00324521 0.0032702 -r_0233 C-22 sterol desaturase (NADP) 0 0.0043708 0 2.58268e-05 -r_0234 C-3 sterol dehydrogenase 0.00324521 0.004421 0.00324521 0.0032702 -r_0235 C-3 sterol dehydrogenase (4-methylzymosterol) 0.00324521 0.004421 0.00324521 0.0032702 -r_0236 C-3 sterol keto reductase (4-methylzymosterol) 0.00324521 0.004421 0.00324521 0.0032702 -r_0237 C-3 sterol keto reductase (zymosterol) 0.00324521 0.004421 0.00324521 0.0032702 -r_0238 C-4 methyl sterol oxidase 0.00324521 0.004421 0.00324521 0.0032702 -r_0239 C-4 methyl sterol oxidase 0.00324521 0.004421 0.00324521 0.0032702 -r_0240 C-4 methyl sterol oxidase 0.00324521 0.004421 0.00324521 0.0032702 -r_0241 C-4 sterol methyl oxidase (4,4-dimethylzymosterol) 0.00324521 0.004421 0.00324521 0.0032702 -r_0242 C-5 sterol desaturase 0 0.0043708 0 2.58268e-05 -r_0243 C-8 sterol isomerase 0 0.00437844 0 5.08121e-05 -r_0244 C-s24 sterol reductase 0.00324521 0.00439763 0.00324521 0.0032702 -r_0249 CAAX farnesyltransferase 0 0 0 0 -r_0250 carbamoyl-phosphate synthase (glutamine-hydrolysing) 0.0256837 0.104884 0.0256837 0.0550553 -r_0252 carnitine O-acetyltransferase 0 0.217799 0 0.161544 -r_0253 carnitine O-acetyltransferase 0 0.0744725 0 0.0394583 -r_0254 carnitine O-acetyltransferase 0 0.217799 0 0.0807718 -r_0255 catalase 0 0.090796 0 0.00222575 -r_0256 catalase 0 0.0369214 0 0.0199241 -r_0259 ceramide-1 hydroxylase (24C) 0 0 0 0 -r_0260 ceramide-1 hydroxylase (24C) 0 0 0 0 -r_0261 ceramide-1 hydroxylase (26C) 0 0 0 0 -r_0262 ceramide-1 hydroxylase (26C) 0 0 0 0 -r_0263 ceramide-1 synthase (24C) 0 0.17424 0 0.0646174 -r_0264 ceramide-1 synthase (26C) 0 0.17424 0 0.0646174 -r_0265 ceramide-2 synthase (24C) 0 0.17424 0 0.0426516 -r_0266 ceramide-2 synthase (26C) 0 0.17424 0 0.0646174 -r_0267 ceramide-3 synthase (24C) 0 0 0 0 -r_0268 ceramide-3 synthase (26C) 0 0 0 0 -r_0269 ceramide-4 synthase (24C) 0 0 0 0 -r_0270 ceramide-4 synthase (26C) 0 0 0 0 -r_0271 chitin deacetylase 0 0 0 0 -r_0272 chitin synthase 0 0 0 0 -r_0273 choline kinase 0 0.1089 0 0.00412868 -r_0274 choline phosphate cytididyltransferase 0 0.1089 0 0.00412868 -r_0278 chorismate mutase 0.0238456 0.0628994 0.0238456 0.0241304 -r_0279 chorismate synthase 0.0369917 0.0760456 0.0369917 0.0372765 -r_0280 cis-aconitate(3-) to isocitrate -1000 1000 0 1.26754 -r_0281 cis-prenyltransferase step 01 0 0 0 0 -r_0282 cis-prenyltransferase step 02 0 0 0 0 -r_0283 cis-prenyltransferase step 03 0 0 0 0 -r_0284 cis-prenyltransferase step 04 0 0 0 0 -r_0285 cis-prenyltransferase step 05 0 0 0 0 -r_0286 cis-prenyltransferase step 06 0 0 0 0 -r_0287 cis-prenyltransferase step 07 0 0 0 0 -r_0288 cis-prenyltransferase step 08 0 0 0 0 -r_0289 cis-prenyltransferase step 09 0 0 0 0 -r_0290 cis-prenyltransferase step 10 0 0 0 0 -r_0291 cis-prenyltransferase step 11 0 0 -1.69374e-10 0 -r_0292 cis-prenyltransferase step 12 0 0 -1.69374e-10 0 -r_0293 cis-prenyltransferase step 13 0 0 -1.69374e-10 0 -r_0294 cis-prenyltransferase step 14 0 0 -1.69374e-10 0 -r_0295 cis-prenyltransferase step 15 0 0 0 0 -r_0296 cis-prenyltransferase step 16 0 0 0 0 -r_0297 cis-prenyltransferase step 17 0 0 0 0 -r_0298 cis-prenyltransferase step 18 0 0 0 0 -r_0299 cis-prenyltransferase step 19 0 0 0 0 -r_0300 citrate synthase 0.0306595 0.965114 0 1.02381 -r_0301 citrate synthase, peroxisomal 0 0.0814337 0 0.040852 -r_0302 citrate to cis-aconitate(3-) -1000 1000 0 1.26754 -r_0303 citrate to cis-aconitate(3-), cytoplasmic -1000 1000 -0.647898 -1.79467 -r_0304 coproporphyrinogen oxidase (O2 required) 8.8e-08 9.03249e-08 8.8e-08 8.86776e-08 -r_0306 CTP synthase (glutamine) 0 0.0674083 0 0.0294755 -r_0307 CTP synthase (NH3) 0 0.084993 0 0.0453945 -r_0308 cystathionine b-lyase 0 0.380795 0 0.12238 -r_0309 cystathionine beta-synthase 0 0.217799 0 0.0372194 -r_0310 cystathionine g-lyase 0 0.0654197 0 0.00889088 -r_0311 cystathionine gamma-synthase 0 0.0705446 0 0.0140158 -r_0312 cysteine synthase 0 0.345647 0 0.10249 -r_0313 cysteinyl-tRNA synthetase 0.000667151 0.000684776 0.000667151 0.000672287 -r_0314 cytidine deaminase 0 0.0806797 0 0.0325521 -r_0315 cytidine kinase (GTP) 0 0.290399 0 0.107696 -r_0317 cytochrome P450 lanosterol 14-alpha-demethylase (NADP) 0.00324521 0.00663783 0.00324521 0.0032702 -r_0318 cytosine deaminase 0 0.0806797 0 0.0325521 -r_0319 D-arabinono-1,4-lactone oxidase 0 0 0 0 -r_0320 D-arabinose 1-dehydrogenase (NAD) 0 0 0 0 -r_0321 D-arabinose 1-dehydrogenase (NADP) 0 0 0 0 -r_0322 D-fructose 1-phosphate D-glyceraldehyde-3-phosphate-lyase 0 0 0 0 -r_0323 D-sorbitol dehydrogenase (D-fructose producing) 0 0 0 0 -r_0326 dCMP deaminase -0.290258 0.013869 0 0.0003168 -r_0327 dCTP deaminase 0 0.17424 0 0.0646174 -r_0328 deoxyadenosine deaminase 0 0 0 0 -r_0329 deoxycytidine deaminase 0 0.290399 0 0.107696 -r_0330 deoxyguanylate kinase (dGMP:ATP) -0.00021678 0.290188 -0.0002112 0.0198149 -r_0331 deoxyhypusine synthase, cytosolic/mitochondrial 0 0 0 0 -r_0332 deoxyribokinase 0 0 0 0 -r_0334 dephospho-CoA kinase 0 0.0490611 0 0.0190816 -r_0335 dethiobiotin synthase 0 0 0 0 -r_0340 dihydroceramidase -0.17424 0 0 -0.0646174 -r_0341 dihydroceramidase -0.17424 0 0 -0.0646174 -r_0342 dihydroceramidase 0 1000 0 17.2752 -r_0343 dihydroceramidase 0 1000 0 21.7208 -r_0344 dihydrofolate reductase 0.000322379 0.0138746 0.000322379 0.00507373 -r_0345 dihydrofolate reductase 0 0 0 0 -r_0346 dihydrofolate synthase 5.5792e-06 5.7266e-06 5.5792e-06 5.62216e-06 -r_0347 dihydroneopterin aldolase 5.5792e-06 5.7266e-06 5.5792e-06 5.62216e-06 -r_0348 dihydroneopterin monophosphate dephosphorylase 0 5.7266e-06 0 5.62216e-06 -r_0349 dihydroorotase -0.0261923 -0.00943961 -0.00943961 -0.0121797 -r_0350 dihydropteroate synthase 0 5.7266e-06 0 5.62216e-06 -r_0351 dihydropteroate synthase 0 5.72659e-06 0 5.62216e-06 -r_0352 dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate) 0.0567245 0.08835 0.0567245 0.08835 -r_0353 dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate) 0.0194788 0.0436341 0.0194788 0.0436341 -r_0354 dihydroxyacetone kinase 0 0.435599 0 0.0128055 -r_0355 dimethylallyltranstransferase 0.00649052 0.0135086 0.00649052 0.00654049 -r_0356 diphosphoglyceromutase 0 0 0 0 -r_0357 diphosphoinositol-1,3,4,6-tetrakisphosphate diphosphohydrolase 0 0.290399 0 0.0484783 -r_0358 diphosphoinositol-1,3,4,6-tetrakisphosphate synthase 0 0.290399 0 0.0484783 -r_0359 diphthine synthase 0 0 0 0 -r_0360 dolichol kinase 0 0 0 0 -r_0361 dolichyl-phosphate D-mannosyltransferase 0.0625627 0.0642155 0.0625627 0.0630444 -r_0362 dolichyl-phosphate-mannose--protein mannosyltransferase 0.0625627 0.0642155 0.0503916 0.0752155 -r_0363 dTMP kinase 0 0.17424 0 0.0646174 -r_0364 dUTP diphosphatase 0 0.174556 0 0.091765 -r_0365 endopolygalacturonase 0 0 0 0 -r_0366 enolase 0.673577 1.6988 0 6.40007 -r_0368 ethanolamine kinase 0 0 0 0 -r_0369 ethyl acetate-hydrolyzing esterase 0 0.345647 0 0.10249 -r_0370 exo-1,3-beta-glucan glucohydrase 0 0 0 0 -r_0373 farnesyltranstransferase 0 0 0 3.38749e-10 -r_0399 fatty-acid--CoA ligase (decanoate) -0.00816783 0.17424 0 1.6576e-05 -r_0400 fatty-acid--CoA ligase (dodecanoate) -0.1089 0.17424 0 1.6576e-05 -r_0402 fatty-acid--CoA ligase (hexadecanoate) -0.1089 0.17424 0 -0.000724324 -r_0410 fatty-acid--CoA ligase (octanoate) -0.00927405 0.17424 0 1.6576e-05 -r_0412 fatty-acid--CoA ligase (tetradecanoate) -0.1089 0.17424 0 1.6576e-05 -r_0436 ferrochelatase 8.8e-08 9.03249e-08 8.8e-08 8.86776e-08 -r_0437 ferrocytochrome-c:hydrogen-peroxide oxidoreductase 0 0 0 0 -r_0438 ferrocytochrome-c:oxygen oxidoreductase 9.5391 9.94026 0 22.9569 -r_0439 ubiquinol:ferricytochrome c reductase 4.76955 4.97013 0 9.68787 -r_0440 FMN adenylyltransferase 0 9.03249e-07 0 8.86775e-07 -r_0441 FMN reductase 0 4.9607 0 0.159691 -r_0442 FMN reductase 0 0.871198 0 0.159691 -r_0443 formaldehyde dehydrogenase 0 0 0 0 -r_0445 formate dehydrogenase 0 0.240525 0 0.0541985 -r_0446 formate-tetrahydrofolate ligase 0 0.21046 0 0.108012 -r_0447 formate-tetrahydrofolate ligase -0.226724 0 0 -0.122531 -r_0448 fructose-2,6-bisphosphate 2-phosphatase 0 0.290399 0 0.0149401 -r_0449 fructose-bisphosphatase 0 0.290399 0 0.107696 -r_0450 fructose-bisphosphate aldolase -0.290399 1.15925 0 0.564487 -r_0451 fumarase -7.22599e-07 1.14037 0.164252 0.392157 -r_0452 fumarase, cytoplasmic -0.379392 0.583348 0.0164762 0.0501328 -r_0453 dihydoorotic acid dehydrogenase 0.00943961 0.0261923 0.00943961 0.014191 -r_0454 fumarate reductase -9.03249e-07 4.9607 0 0.0798455 -r_0455 soluble fumarate reductase 0 9.03249e-07 0 8.86775e-07 -r_0457 g-glutamyltransferase 0 0 0 0 -r_0458 galactokinase 0 0 0 0 -r_0459 galactose-1-phosphate uridylyltransferase 0 1000 0 17.9651 -r_0460 gamma-glutamylcysteine synthetase 0 0.1452 0 0.0538478 -r_0461 geranylgeranyltranstransferase 0 0 0 3.38749e-10 -r_0462 geranyltranstransferase 0.00649052 0.0135086 0.00649052 0.00654049 -r_0463 glucan 1,4-alpha-glucosidase 0 0.17424 0 0.0646174 -r_0464 glucan 1,4-alpha-glucosidase, vacuole 0 0.17424 0 0.0646174 -r_0465 glucosamine-6-phosphate deaminase 0 0.290399 0 0.107696 -r_0466 glucose 6-phosphate dehydrogenase 0 2.37778 0.876334 1.31394 -r_0467 glucose-6-phosphate isomerase -1.39562 0.982779 0 -0.25322 -r_0468 glutamate 5-kinase 0 0.149567 0.0130443 0.0584383 -r_0469 glutamate decarboxylase 0 0.435599 0 0.0526599 -r_0470 glutamate dehydrogenase (NAD) 0 0.871198 0 0.323087 -r_0471 glutamate dehydrogenase (NADP) 0 1.39846 0.37135 0.944722 -r_0472 glutamate synthase (NADH2) 0 0.435599 0 0.142684 -r_0473 glutamate-5-semialdehyde dehydrogenase 0 0.149567 0.0130443 0.0584383 -r_0475 glutaminase 0 0.290399 0 0.107696 -r_0476 glutamine synthetase 0.118454 0.554053 0.118454 0.261139 -r_0477 glutamine-fructose-6-phosphate transaminase 0 0.290399 0 0.215391 -r_0478 glutaminyl-tRNA synthetase 0.0106542 0.0109357 0.0106542 0.0107362 -r_0479 glutamyl-tRNA synthetase 0.030507 0.031313 0.030507 0.0307419 -r_0480 glutamyl-tRNA synthetase 0 0 0 0 -r_0481 glutathione oxidoreductase 0 0.090796 0 0.0176253 -r_0482 glutathione oxidoreductase 0 0 0 0 -r_0483 glutathione peridoxase 0 0.090796 0 0.0218802 -r_0484 glutathione peroxidase, mitochondria 0 0 0 0 -r_0485 glutathione synthetase 0 0.1452 0 0.0538478 -r_0486 glyceraldehyde-3-phosphate dehydrogenase 0.823733 1.6988 0.403231 1.24828 -r_0487 glycerol dehydrogenase (NADP-dependent) 0 0.435599 0 0.00640275 -r_0488 glycerol kinase 0 0.290399 0 0.107696 -r_0489 glycerol-3-phosphatase 0 0.437445 0 0.113617 -r_0490 glycerol-3-phosphate dehydrogenase (fad) 0 4.9607 0 0.159691 -r_0491 glycerol-3-phosphate dehydrogenase (NAD) 0 5.40426 0 0.342702 -r_0492 glycerol-3-phosphate dehydrogenase (NAD) 0 5.40426 0 0.175041 -r_0497 glycerophosphodiester phosphodiesterase (glycerophosphocholine) 0 0.0486091 0 0.00316869 -r_0499 glycinamide ribotide transformylase 0.0187472 0.0449313 0.0187472 0.027536 -r_0500 glycine C-acetyltransferase 0 0 0 0 -r_0501 glycine cleavage system 0 0.291631 0 0.0691103 -r_0502 glycine hydroxymethyltransferase -0.148489 0.11666 0 0.0332934 -r_0503 glycine hydroxymethyltransferase -0.213161 0.196637 0 0.0612831 -r_0504 glycine-cleavage complex (lipoamide) 0 0.291631 0 0.0691103 -r_0505 glycine-cleavage complex (lipoamide) 0 0.82552 0 0.77126 -r_0506 glycine-cleavage complex (lipoylprotein) 0 0.291631 0 0.0691103 -r_0507 glycine-cleavage complex (lipoylprotein) 0 0.291631 0 0.0691103 -r_0508 glycine-cleavage complex (lipoylprotein) 0 0.291631 0 0.0691103 -r_0509 glycine-cleavage system (lipoamide) 0 0.291631 0 0.0691103 -r_0510 glycogen (starch) synthase 0.0318045 0.467403 0 0.672431 -r_0511 glycogen phosphorylase 0 0.435599 0 0.160198 -r_0512 glycyl-tRNA synthetase 0.0293546 0.0301302 0.0120419 0.0466674 -r_0514 GMP synthase 0.00422384 0.0712391 0.00422384 0.00752212 -r_0518 GPI-anchor assembly, step 2 0 0 0 0 -r_0519 GPI-anchor assembly, step 5 0 0 0 0 -r_0520 GPI-anchor assembly, step 6 0 0 0 0 -r_0521 GPI-anchor assembly, step 7 0 0 0 0 -r_0522 GPI-anchor assembly, step 8 0 0 0 0 -r_0523 GPI-anchor assembly, step 9 0 0 0 0 -r_0524 GTP cyclohydrolase I 5.5792e-06 5.7266e-06 5.5792e-06 5.62216e-06 -r_0525 GTP cyclohydrolase II 8.8e-05 9.03249e-05 8.8e-05 8.86775e-05 -r_0526 guanine deaminase 0 0.0670152 0 0.00329827 -r_0527 guanine phosphoribosyltransferase 0 0.17424 0 0.0524652 -r_0528 guanylate kinase 0 0.290704 0 0.108 -r_0529 guanylate kinase (GMP:dATP) -0.290399 0.290704 0 0.108 -r_0530 heme O monooxygenase 8.8e-08 9.03249e-08 0 1.77355e-07 -r_0531 Heme O synthase 8.8e-08 9.03249e-08 8.8e-08 8.86776e-08 -r_0532 hexaprenyldihydroxybenzoate methyltransferase 0 0 0 3.38749e-10 -r_0533 hexokinase (D-fructose:ATP) 0 0 0 0 -r_0534 hexokinase (D-glucose:ATP) 1.10101 1.3453 0 4.59077 -r_0535 hexokinase (D-mannose:ATP) 0 0 0 0 -r_0536 histidinol dehydrogenase 0.00670183 0.0282728 0.00670183 0.0173331 -r_0537 histidinol-phosphatase 0.00670183 0.0282728 0.00670183 0.0173331 -r_0538 histidinol-phosphate transaminase 0.00670183 0.0282728 0.00670183 0.0173331 -r_0539 histidyl-tRNA synthetase 0.00670183 0.00687889 0.00670183 0.00675343 -r_0540 histidyl-tRNA synthetase 0 0 0 0 -r_0541 hnRNP arginine N-methyltransferase 0 0 0 0 -r_0542 homoacontinate hydratase 0.0289301 0.0501544 0.0121938 0.0458891 -r_0543 homocitrate synthase 0 0 0 0 -r_0544 homocysteine S-methyltransferase 0 0.1089 0 0.000335891 -r_0545 homoisocitrate dehydrogenase 0.0289301 0.0501544 0.0289301 0.0291528 -r_0546 homoserine dehydrogenase (NADH) 0 0.154495 0 0.0737499 -r_0547 homoserine dehydrogenase (NADP) 0 0.135183 0 0.0652104 -r_0548 homoserine kinase 0.0193474 0.14937 0.0193474 0.0663036 -r_0549 homoserine O-trans-acetylase 0.00512504 0.0705447 0.00512504 0.0140159 -r_0550 hydrogen peroxide reductase (thioredoxin) 0 0.090796 0 0.00881403 -r_0551 hydrogen peroxide reductase (thioredoxin) 0 0 0 0 -r_0552 hydrogen peroxide reductase (thioredoxin) 0 0.0524944 0 0.0759895 -r_0553 hydroxyacylglutathione hydrolase 0 1000 0 4.80747 -r_0554 hydroxyacylglutathione hydrolase 0 0 0 0 -r_0555 hydroxybenzoate octaprenyltransferase 0 0 0 3.38749e-10 -r_0556 hydroxyethylthiazole kinase 0 0.1089 0 0.0403859 -r_0557 hydroxymethylbilane synthase 8.8e-08 9.03249e-08 8.8e-08 8.86776e-08 -r_0558 hydroxymethylglutaryl CoA reductase 0.0194715 0.0432618 0 0.0392429 -r_0559 hydroxymethylglutaryl CoA synthase 0 0.0370953 0 0.0196215 -r_0560 hydroxymethylglutaryl CoA synthase 0 0.0432618 0 0.0196215 -r_0561 hydroxymethylpyrimidine kinase (ATP) 1.056e-07 0.1089 0 0.0403861 -r_0562 hypoxanthine phosphoribosyltransferase (Hypoxanthine) 0 0.174243 0 0.0224827 -r_0563 Imidazole-glycerol-3-phosphate synthase 0.00670183 0.0282728 0.00670183 0.0173331 -r_0564 imidazoleglycerol-phosphate dehydratase 0.00670183 0.0282728 0.00670183 0.0173331 -r_0565 IMP dehydrogenase 0.00422384 0.0250568 0 0.0192681 -r_0566 indole-3-glycerol-phosphate synthase 0.0131406 0.0575985 0.0131406 0.0132417 -r_0567 indole-3-pyruvate decarboxylase 0 0.0126389 0 0.000202342 -r_0568 inorganic diphosphatase 0 0.637856 0 0.323087 -r_0569 inorganic diphosphatase 0 0.956783 0.189756 0.681509 -r_0570 inosine monophosphate cyclohydrolase 0.0254489 0.052256 0 0.0508979 -r_0571 inositol-1,3,4,5,6-pentakisphosphate 2-kinase 0 0.1452 0 0.0476465 -r_0572 inositol-1,3,4,5-triphosphate 6-kinase, nucleus 0 0 0 0 -r_0573 inositol-1,4,5,6- tetrakisphosphate 3-kinase, nucleus 0 0 0 0 -r_0574 inositol-1,4,5-triphosphate 6-kinase, nucleus 0 0 0 0 -r_0575 inositol-1,4,5-trisphosphate 3-kinase, nucleus 0 0 0 0 -r_0596 IPS phospholipase C 0 0 0 0 -r_0597 IPS phospholipase C 0 0 0 0 -r_0598 IPS phospholipase C 0 0 0 0 -r_0599 IPS phospholipase C 0 0 0 0 -r_0600 IPS phospholipase C 0 0 0 0 -r_0601 IPS phospholipase C 0 0 0 0 -r_0602 IPS phospholipase C 0 0 0 0 -r_0603 IPS phospholipase C 0 0 0 0 -r_0604 IPS phospholipase C 0 0 0 0 -r_0605 IPS phospholipase C 0 0 0 0 -r_0606 IPS phospholipase C 0 0 0 0 -r_0607 IPS phospholipase C 0 0 0 0 -r_0608 IPS phospholipase C 0 0 0 0 -r_0609 IPS phospholipase C 0 0 0 0 -r_0610 IPS phospholipase C 0 0 0 0 -r_0611 IPS phospholipase C 0 0 0 0 -r_0612 IPS phospholipase C 0 0 0 0 -r_0613 IPS phospholipase C 0 0 0 0 -r_0614 IPS phospholipase C 0 0 0 0 -r_0615 IPS phospholipase C 0 0 0 0 -r_0616 IPS phospholipase C 0 0 0 0 -r_0617 IPS phospholipase C 0 0 0 0 -r_0618 IPS phospholipase C 0 0 0 0 -r_0619 IPS phospholipase C 0 0 0 0 -r_0620 IPS phospholipase C 0 0 0 0 -r_0621 IPS phospholipase C 0 0 0 0 -r_0622 IPS phospholipase C 0 0 0 0 -r_0623 IPS phospholipase C 0 0 0 0 -r_0624 IPS phospholipase C 0 0 0 0 -r_0625 IPS phospholipase C 0 0 0 0 -r_0626 IPS phospholipase C 0 0 0 0 -r_0627 IPS phospholipase C 0 0 0 0 -r_0628 IPS phospholipase C 0 0 0 0 -r_0629 IPS phospholipase C 0 0 0 0 -r_0630 IPS phospholipase C 0 0 0 0 -r_0631 IPS phospholipase C 0 0 0 0 -r_0632 IPS phospholipase C 0 0 0 0 -r_0633 IPS phospholipase C 0 0 0 0 -r_0634 IPS phospholipase C 0 0 0 0 -r_0635 IPS phospholipase C 0 0 0 0 -r_0636 IPS phospholipase C 0 0 0 0 -r_0637 IPS phospholipase C 0 0 0 0 -r_0638 IPS phospholipase C 0 0 0 0 -r_0639 IPS phospholipase C 0 0 0 0 -r_0640 IPS phospholipase C 0 0 0 0 -r_0641 IPS phospholipase C 0 0 0 0 -r_0642 IPS phospholipase C 0 0 0 0 -r_0643 IPS phospholipase C 0 0 0 0 -r_0644 IPS phospholipase C 0 0 0 0 -r_0645 IPS phospholipase C 0 0 0 0 -r_0646 IPS phospholipase C 0 0.109182 0 0.000819621 -r_0647 IPS phospholipase C 0 0.109182 0 0.000819621 -r_0648 IPS phospholipase C 0 0.109182 0 0.000819621 -r_0649 IPS phospholipase C 0 0.109182 0 0.000819621 -r_0650 IPS phospholipase C 0 0.109182 0 0.000819621 -r_0651 IPS phospholipase C 0 0.109182 0 0.000819621 -r_0652 IPS phospholipase C 0 0.109182 0 0.000819621 -r_0653 IPS phospholipase C 0 0.109182 0 0.000819621 -r_0654 IPS phospholipase C 0 0.109182 0 0.000819621 -r_0655 IPS phospholipase C 0 0.109182 0 0.000819621 -r_0656 isoamyl acetate-hydrolyzing esterase 0 0.17424 0 0.0646174 -r_0657 isobutyl acetate-hydrolyzing esterase 0 0.17424 0 0.0646174 -r_0658 isocitrate dehydrogenase (NAD+) 0 4.06161 1.42644 2.04474 -r_0659 isocitrate dehydrogenase (NADP) -4.00185 0.895858 -1.01112 -1.40864 -r_0661 isocitrate dehydrogenase (NADP+), peroxisomal 0 0.0198045 0 0.00399946 -r_0662 isocitrate lyase 0 0.448831 0 0.0941428 -r_0663 isoleucine transaminase -0.0419777 0.851719 0 -0.0307283 -r_0664 isoleucine transaminase -0.871198 0 0 -0.200248 -r_0665 isoleucyl-tRNA synthetase 0.0194788 0.0199934 0.0194788 0.0196288 -r_0666 isoleucyl-tRNA synthetase 0 0 0 0 -r_0667 isopentenyl-diphosphate D-isomerase 0.00649052 0.0135086 0.00649052 0.00654049 -r_0668 itaconate-CoA ligase (ADP-forming) 0 0 0 0 -r_0669 ketol-acid reductoisomerase (2-aceto-2-hydroxybutanoate) 0.0194788 0.0436341 0.0194788 0.0436341 -r_0670 kynureninase 0 0.0444579 0 0.000101171 -r_0671 kynurenine 3-monooxygenase 0.0102698 0.0137972 0.0102698 0.0103489 -r_0672 L-1-pyrroline-3-hydroxy-5-carboxylate dehydrogenase -1000 0 0 -0.0088369 -r_0673 L-4-hydroxyglutamate semialdehyde dehydrogenase 0 1000 0 0.0088369 -r_0674 L-alanine transaminase -0.435599 0 0 -0.0604528 -r_0675 L-allo-threonine aldolase 0 0 0 0 -r_0676 L-allo-threonine dehydrogenase 0 0 0 0 -r_0678 L-aminoadipate-semialdehyde dehydrogenase (NADPH) 0.0289301 0.0501544 0.0289301 0.0291528 -r_0679 L-asparaginase 0 0.1089 0 0.00798259 -r_0680 L-asparaginase 0 0.1089 0 0.00798259 -r_0681 L-erythro-4-hydroxyglutamate:2-oxoglutarate aminotransferase 0 0 0 0 -r_0682 L-erythro-4-hydroxyglutamate:2-oxoglutarate aminotransferase 0 0 0 0 -r_0683 L-erythro-4-hydroxyglutamate:2-oxoglutarate aminotransferase 0 0 0 0 -r_0687 L-hydroxyproline reductase (NADP) 0 0 0 0 -r_0688 L-lactaldehyde:NADP+ 1-oxidoreductase 0 0.124457 0 0.0461553 -r_0689 L-serine deaminase 0 0.217799 0 0.0372194 -r_0690 L-serine dehydrogenase 0 0 0 0 -r_0691 L-sorbitol dehydrogenase (L-sorbose-producing) 0 0 0 0 -r_0692 L-threonine deaminase 0 0.0706533 0 0.0446137 -r_0693 L-threonine deaminase 0 0.0706533 0 0.0446137 -r_0694 L-tryptophan:oxygen 2,3-oxidoreductase (decyclizing) 0.0102698 0.0547277 0.0102698 0.010371 -r_0695 L-tyrosine N-formyltransferase 0 0.0146634 0 0.000284804 -r_0696 lactaldehyde dehydrogenase 0 0.124457 0 0.0461553 -r_0697 lactoylglutathione lyase 0 1000 0 4.80747 -r_0698 lanosterol synthase 0.00324521 0.00675425 0.00324521 0.0032702 -r_0699 leucine transaminase -0.0527863 -0.0299611 -0.0299611 -0.033362 -r_0700 leucine transaminase 0 0 0 0 -r_0701 leucyl-tRNA synthetase 0.0299611 0.0307527 0.0299611 0.0301918 -r_0702 leucyl-tRNA synthetase 0 0 0 0 -r_0703 leukotriene A4 hydrolase 0 0 0 0 -r_0704 leukotriene A4 hydrolase 0 0 0 0 -r_0705 leukotriene A4 hydrolase 0 0 0 0 -r_0706 leukotriene A4 hydrolase 0 0 0 0 -r_0707 leukotriene A4 hydrolase 0 0 0 0 -r_0708 leukotriene A4 hydrolase 0 0 0 0 -r_0711 lysyl-tRNA synthetase 0.0289301 0.0296944 0.0289301 0.0291528 -r_0712 lysyl-tRNA synthetase 0 0 0 0 -r_0713 malate dehydrogenase -0.299352 1000 0.239979 0.807658 -r_0714 malate dehydrogenase, cytoplasmic -1000 0.145547 0 -0.639321 -r_0715 malate dehydrogenase, peroxisomal -0.0738428 0 0 -0.000400204 -r_0716 malate synthase 0 0.17424 0 0.08382 -r_0717 malate synthase 0 0.0686089 0 0.0351731 -r_0718 malic enzyme (NAD) 0 0.893845 0 0.207147 -r_0719 malic enzyme (NADP) 0 0.250103 0 0.125886 -r_0721 malonyl-CoA-ACP transacylase 0 0 0 0 -r_0722 mannose-1-phosphate guanylyltransferase 0.0625627 0.0642155 0.0625627 0.0630444 -r_0723 mannose-6-phosphate isomerase -0.0885507 -0.0625627 -0.0625627 -0.0629845 -r_0724 methenyltetrahydrifikate cyclohydrolase 0 0.226724 0 0 -r_0725 methenyltetrahydrofolate cyclohydrolase -0.166264 0.0965643 0 -0.0173332 -r_0726 methionine adenosyltransferase 0.0122558 0.121252 0.0122836 0.0126195 -r_0727 methionine synthase 0.017364 0.0642401 0.0173918 0.0266186 -r_0728 methionyl-tRNA formyltransferase 0 0 0 0 -r_0729 methionyl-tRNA synthetase 0.00512493 0.00526033 0.00512493 0.00516439 -r_0730 methionyl-tRNA synthetase 0 0 0 0 -r_0731 methylenetetrahydrofolate dehydrogenase (NAD) 0 0.871198 0 0.323087 -r_0732 methylenetetrahydrofolate dehydrogenase (NADP) -0.827002 0.0965643 0 0.0378697 -r_0733 methylenetetrahydrofolate dehydrogenase (NADP) 0 0.226724 0 0.122531 -r_0734 methylisocitrate lyase 0 0.0559751 0 0.0184808 -r_0735 mevalonate kinase (atp) 0 0.0405257 0 0.0196215 -r_0736 mevalonate kinase (ctp) 0 0.0405257 0 0.0196215 -r_0737 mevalonate kinase (gtp) 0 0.0405257 0 0.0196215 -r_0738 mevalonate kinase (UTP) 0 0.0405257 0 0.0196215 -r_0739 mevalonate pyrophoshate decarboxylase 0.0194715 0.0405257 0.0194715 0.0196215 -r_0747 MIPC synthase 0 0 0 0 -r_0748 MIPC synthase 0 0 0 0 -r_0749 MIPC synthase 0 0 0 0 -r_0750 MIPC synthase 0 0 0 0 -r_0751 MIPC synthase 0 0 0 0 -r_0752 MIPC synthase 0 0 0 0 -r_0753 MIPC synthase 0 0 0 0 -r_0754 MIPC synthase 0 0 0 0 -r_0755 MIPC synthase 0 0 0 0 -r_0756 MIPC synthase 0 0 0 0 -r_0757 myo-inositol 1-phosphatase 0.000702907 0.109936 0 0.00304506 -r_0758 myo-inositol-1-phosphate synthase 0.000702907 0.0149115 0.000702907 0.00152253 -r_0759 N-acetyl-g-glutamyl-phosphate reductase 0.0162441 0.178092 0.0162441 0.0198482 -r_0760 N-acetylglucosamine-6-phosphate synthase 0 0 0 0 -r_0761 N-acteylglutamate synthase 0 0.0227031 0 -1.38778e-17 -r_0762 N-formyl-L-kynurenine amidohydrolase 0.0102698 0.0547277 0.0102698 0.010371 -r_0763 N-formyltyrosine oxidase 0 0.00733171 0 0.000142402 -r_0764 NAD diphosphatase 0 0 0 4.24931e-13 -r_0765 NAD kinase 0 0.000295361 0 0.000289976 -r_0766 NAD kinase 0 0 0 0 -r_0767 NAD nucleosidase nuclear 0 0 0 0 -r_0768 NAD synthase 0.0102698 0.0137972 0.0102698 0.0103489 -r_0769 NAD synthase 0 0 0 0 -r_0770 NADH dehydrogenase, cytosolic/mitochondrial 0 4.9607 0 6.05731 -r_0771 NADH kinase 0 0.000295362 0 0.000577736 -r_0772 NADH kinase mitochondrial 0 1.64194e-12 0 0 -r_0773 NADH:ubiquinone oxidoreductase 0 4.9607 0 3.72618 -r_0774 NAPRtase 0 0 0 0 -r_0775 NAPRtase 0 0 0 0 -r_0781 nicotinamidase 0 0 0 0 -r_0782 nicotinamide N-methyltransferase 0 0 0 0 -r_0783 nicotinamide-nucleotide adenylyltransferase 0 0 0 0 -r_0784 nicotinamide-nucleotide adenylyltransferase 0 0 0 0 -r_0785 nicotinate-nucleotide adenylyltransferase 0.0102698 0.0137972 0 0.0206977 -r_0786 nicotinate-nucleotide diphosphorylase (carboxylating) 0.0102698 0.0137972 0.0102698 0.0103489 -r_0787 nicotinate-nucleotide diphosphorylase (carboxylating) 0 0 0 0 -r_0788 nucleoside diphosphatase 0 0.290399 0 0.107696 -r_0789 nucleoside diphosphatase 0 0.290399 0 0.107696 -r_0790 nucleoside diphosphatase 0 0.290399 0 0.107696 -r_0791 nucleoside diphosphatase 0 0.290399 0 0.107696 -r_0792 nucleoside diphosphatase 0 0.290399 0 0.107696 -r_0793 nucleoside diphosphatase 0 0.124457 0 0.0461553 -r_0795 nucleoside diphosphate kinase 0 0.311086 0 0.128382 -r_0796 nucleoside diphosphate kinase 0 0.290704 0 0.108 -r_0797 nucleoside diphosphate kinase 0 0.17424 0 0.0646174 -r_0798 nucleoside diphosphate kinase 0 0.290399 0 0.107696 -r_0799 nucleoside diphosphate kinase 0 0.17424 0 0.0646174 -r_0800 nucleoside diphosphate kinase 0.0838814 0.393758 0.0838814 0.211054 -r_0801 nucleoside diphosphate kinase 0 0.290399 0 0.107696 -r_0802 nucleoside diphosphate kinase 0 0 0 0 -r_0803 nucleoside diphosphate kinase 0 0.17424 0 0.0351545 -r_0804 nucleoside triphosphatase 0 0.290399 0 0.107696 -r_0805 nucleoside triphosphatase 0 0.290399 0 0.107696 -r_0806 nucleoside triphosphatase 0 0.290399 0 0.107696 -r_0807 nucleoside triphosphatase 0 0.290399 0 0.107696 -r_0810 nucleoside-diphosphatase (GDP), Golgi 0 0.290399 0 0.107696 -r_0811 nucleoside-diphosphate kinase (ATP:UDP) 0.136186 0.591257 0.136186 0.315856 -r_0812 O-acetylhomoserine (thiol)-lyase 0 0 0 0 -r_0813 O-acetylhomoserine (thiol)-lyase 0 0.0705446 0 0.0140158 -r_0815 O-succinylhomoserine lyase (L-cysteine) -0.222924 0.351828 0 0.0543366 -r_0816 ornithine carbamoyltransferase 0.0162441 0.074324 0.0162441 0.0209095 -r_0817 ornithine decarboxylase 0 0.0272465 0 0.00360413 -r_0818 ornithine transacetylase 0.0162441 0.178092 0.0162441 0.0198482 -r_0819 ornithine transaminase 0 0.161848 0 0.00360413 -r_0820 orotate phosphoribosyltransferase -0.0261923 -0.00943961 0 -0.0237033 -r_0821 orotidine-5'-phosphate decarboxylase 0.00943961 0.0261923 0.00943961 0.014191 -r_0831 oxoglutarate dehydrogenase (dihydrolipoamide S-succinyltransferase) 0 0.777334 0 0.778876 -r_0832 oxoglutarate dehydrogenase (lipoamide) 0 0.777334 0 0.778876 -r_0841 pantetheine-phosphate adenylyltransferase 0 0.0871365 0 0.00388729 -r_0842 pantothenate kinase 1.672e-05 1.71617e-05 1.672e-05 1.68487e-05 -r_0843 pantothenate synthase 1.672e-05 0.011911 1.672e-05 0.000160873 -r_0844 peroxisomal acyl-CoA thioesterase 0 0.17424 0 0.00509449 -r_0845 peroxisomal acyl-CoA thioesterase 0 0.17424 0 0.00533934 -r_0847 peroxisomal acyl-CoA thioesterase 0 0.17424 0 0.000214175 -r_0848 peroxisomal acyl-CoA thioesterase 0 0.17424 0 0.00544101 -r_0849 peroxisomal acyl-CoA thioesterase 0 0.17424 0 0.000109982 -r_0850 peroxisomal acyl-CoA thioesterase 0 0.17424 0 0.00522681 -r_0851 phenylalanine transaminase -1000 999.999 0 5.09933 -r_0852 phenylalanyl-tRNA synthetase 0.0135351 0.0138927 0.0135351 0.0136393 -r_0853 phenylalanyl-tRNA synthetase 0 0 0 0 -r_0854 phenylpyruvate decarboxylase 0 0.0162023 0 0.000284804 -r_0855 phopshoribosylaminoimidazole synthetase 0.0187472 0.0449313 0.0187472 0.027536 -r_0882 phosphoacetylglucosamine mutase 0 0 0 0 -r_0883 phosphoadenylyl-sulfate reductase (thioredoxin) 0.00580891 0.138525 0 0.0924361 -r_0884 phosphoenolpyruvate carboxykinase 0 0.290399 0 0.107696 -r_0885 phosphoethanolamine cytidyltransferase 0 0 0 0 -r_0886 phosphofructokinase 0 1.15925 0 0.576738 -r_0887 phosphofructokinase (s7p) 0 1.15925 0 0.576738 -r_0888 phosphoglucomutase 0.13185 0.30609 0 0.13185 -r_0889 phosphogluconate dehydrogenase 0 2.37778 0.465018 1.94224 -r_0890 phosphoglucosamine mutase 0 0 0 0 -r_0891 phosphoglycerate dehydrogenase 0 0.336623 0 0.18471 -r_0892 phosphoglycerate kinase 0.823733 1.6988 1.20709 1.29979 -r_0893 phosphoglycerate mutase 0.673577 1.6988 1.11487 2.51034 -r_0902 phosphomannomutase -0.0885507 -0.0625627 -0.0625627 -0.0885507 -r_0903 phosphomethylpyrimidine kinase 1.056e-07 0.1089 0 0.0403861 -r_0904 phosphomevalonate kinase 0.0194715 0.0405257 0.0194715 0.0196215 -r_0905 phosphopantothenate-cysteine ligase 1.672e-05 1.71617e-05 1.672e-05 1.68487e-05 -r_0906 phosphopantothenoylcysteine decarboxylase 1.672e-05 1.71617e-05 1.672e-05 1.68487e-05 -r_0907 phosphopentomutase -0.290405 0.17424 0 0.184299 -r_0908 phosphoribosyl amino imidazolesuccinocarbozamide synthetase 0.0187471 0.0449312 0.0187471 0.0275359 -r_0909 phosphoribosyl-AMP cyclohydrolase 0.00670183 0.0282728 0.00670183 0.0173331 -r_0910 phosphoribosyl-ATP pyrophosphatase 0.00670183 0.0282728 0.00670183 0.0173331 -r_0911 phosphoribosylaminoimidazole-carboxylase 0.0187471 0.0449312 0.0187471 0.0275359 -r_0912 phosphoribosylaminoimidazolecarboxamide formyltransferase 0.0254489 0.052256 0 0.0615291 -r_0913 phosphoribosylanthranilate isomerase 0.0131406 0.0575985 0.0131406 0.0132417 -r_0914 phosphoribosylglycinamidine synthetase 0.0187472 0.0449313 0.0187472 0.027536 -r_0915 phosphoribosylpyrophosphate amidotransferase 0.0187472 0.0449313 0.0187472 0.027536 -r_0916 phosphoribosylpyrophosphate synthetase 0.058299 0.232555 0.0498851 0.123617 -r_0917 phosphoserine phosphatase (L-serine) 0 0.336623 0.0385938 0.0923551 -r_0918 phosphoserine transaminase 0 0.336623 0.0385938 0.0923551 -r_0919 phytoceramidase 0 1000 0 17.2752 -r_0920 phytoceramidase 0 1000 0 21.7208 -r_0921 Phytosphingosine phosphate lyase 0 0 0 0 -r_0922 phytosphingosine synthesis 0 0 0 0 -r_0929 polyamine oxidase 0 0 0 0 -r_0935 porphobilinogen synthase 3.52e-07 3.613e-07 3.52e-07 3.5471e-07 -r_0936 poylamine oxidase 0 0 0 0 -r_0937 poylamine oxidase 1.672e-05 0.040151 1.672e-05 0.000160873 -r_0938 prephenate dehydratase 0.0135351 0.0297374 0.0135351 0.0138199 -r_0939 prephenate dehydrogenase (NADP) 0.0103105 0.0493644 0.0103105 0.0105953 -r_0940 proline oxidase (NAD) 0 0.1452 0 0.0176738 -r_0941 prolyl-tRNA synthetase 0.0166484 0.0170883 0.0166484 0.0167766 -r_0942 protoporphyrinogen oxidase 4.4e-08 4.51624e-08 4.4e-08 4.43388e-08 -r_0943 purine-nucleoside phosphorylase 0 0 0 0 -r_0949 guanosine phosphorylase 0 0.17424 0 0.000896765 -r_0950 guanosine phosphorylase 0 0 0 0 -r_0951 inosine phosphorylase -0.0367637 0.17424 0 0.00490095 -r_0953 pyridoxal oxidase 0 0 0 0 -r_0954 pyridoxamine 5'-phosphate oxidase 0 0 0 0 -r_0955 pyridoxine 5'-phosphate oxidase 0 0 0 0 -r_0956 pyridoxine oxidase 0 0.181575 0 0.00429063 -r_0957 pyrroline-5-carboxylate reductase 0.0166484 0.161848 0.0166484 0.0584383 -r_0958 pyruvate carboxylase 0.0285019 1.09059 0 0.76683 -r_0959 pyruvate decarboxylase 0 0.525666 0 0.909291 -r_0960 pyruvate decarboxylase (acetoin-forming) 0 0.0329493 0 0.0988294 -r_0961 pyruvate dehydrogenase 0.0171072 1.25599 0.401945 0.521516 -r_0962 pyruvate kinase 0.599594 1.82868 1.04032 1.36322 -r_0963 quinone oxidoreductase 0 0 0 3.38749e-10 -r_0964 reduced glutathione via ABC system 0 0.290399 0 0.00785899 -r_0965 riboflavin kinase 0 0.290399 0 0.107696 -r_0966 riboflavin kinase 0 9.03249e-07 0 8.86775e-07 -r_0967 riboflavin synthase 0.000176 0.00018065 0.000176 0.000177355 -r_0968 riboflavin synthase 8.8e-05 9.03249e-05 8.8e-05 8.86775e-05 -r_0969 ribokinase 0 0.290399 0 0.107696 -r_0970 ribonucleoside-triphosphate reductase (ATP) 0 0.000325169 0 0.000319239 -r_0971 ribonucleoside-triphosphate reductase (CTP) 0 0.0134992 0 0.00255664 -r_0972 ribonucleoside-triphosphate reductase (GTP) 0 0.000216777 0 0.000212826 -r_0973 ribonucleoside-triphosphate reductase (UTP) 0 0.0138419 0 0.0020768 -r_0974 ribonucleotide reductase 0 0.00032517 0 0.000969738 -r_0975 ribonucleotide reductase 0 0 0 0 -r_0976 ribonucleotide reductase 0 0.0140802 0 0.0116228 -r_0977 ribonucleotide reductase 0 0 0 0 -r_0978 ribonucleotide reductase 0 0.00021678 0 0.000851304 -r_0979 ribonucleotide reductase 0 0 0 0 -r_0982 ribose-5-phosphate isomerase 0.0511491 0.843744 0.34326 0.412766 -r_0983 ribosylnicotinamide kinase 0 0 0 0 -r_0984 ribulose 5-phosphate 3-epimerase -0.0805664 1.53386 0.532897 0.716798 -r_0985 S-adenosyl-L-methionine:3-hexaprenyl-4,5-dihydroxylate O-methyltransferase 0 0 0 3.38749e-10 -r_0986 S-adenosyl-methionine delta-24-sterol-c-methyltransferase 0 0.00437844 0 5.08121e-05 -r_0987 S-formylglutathione hydralase 0 0 0 0 -r_0988 saccharopine dehydrogenase (NAD, L-lysine forming) 0.0289301 0.0501544 0.0289301 0.0291528 -r_0989 saccharopine dehydrogenase (NADP, L-glutamate forming) 0.0289301 0.0501544 0.0289301 0.0291528 -r_0990 sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase -0.290399 1.15925 0 0.565968 -r_0992 serine O-acetyltransferase 0 0.1089 0 0.00437391 -r_0993 serine palmitotransferase 0 0 0 0 -r_0995 seryl-tRNA synthetase 0.0187409 0.019236 0 0.0377703 -r_0996 shikimate dehydrogenase 0.0369917 0.0760456 0.0369917 0.0372765 -r_0997 shikimate kinase 0.0369917 0.0760456 0.0369917 0.0372765 -r_0998 sirohydrochlorin dehydrogenase 0 0 0 0 -r_0999 sirohydrochlorin ferrochetalase 0 0 0 0 -r_1000 fumarate reductase (FMN) 0 4.9607 0 0.0798455 -r_1001 spermidine synthase 0 0.0127204 0 0.000144153 -r_1002 spermine synthase 1.672e-05 0.040151 1.672e-05 0.000160873 -r_1003 sphinganine phosphate lyase 0 0 0 0 -r_1004 sphingoid base-phosphate phosphatase (phytosphingosine 1-phosphate) 0 0.290399 0 0.107696 -r_1005 sphingoid base-phosphate phosphatase (sphinganine 1-phosphatase) 0 0.290399 0 0.215391 -r_1006 sphingolipid long chain base kinase (phytosphingosine) 0 0.290399 0 0.107696 -r_1007 sphingolipid long chain base kinase (sphinganine) 0 0.290399 0 0.138984 -r_1008 spontaneous cis-aconitate(3-) to trans-aconitate 0 0 0 0 -r_1009 spontaneous cis-aconitate(3-) to trans-aconitate 0 0 0 0 -r_1010 squalene epoxidase (NAD) 0 0 0 0 -r_1011 squalene epoxidase (NADP) 0.00324521 0.00675425 0.00324521 0.0032702 -r_1012 squalene synthase 0.00324521 0.00675425 0.00324521 0.0032702 -r_1021 succinate dehydrogenase (ubiquinone-6) 0.00942877 4.97013 0.125728 0.703274 -r_1022 succinate-CoA ligase (ADP-forming) 0 1.09716 0.159795 0.389437 -r_1023 succinate-semialdehyde dehydrogenase (NADP) 1.056e-07 0.435599 1.056e-07 0.05266 -r_1024 sucrose hydrolyzing enxyme 0 0 0 0 -r_1025 sulfate adenylyltransferase 0 0.107671 0 0.0439922 -r_1026 sulfate adenylyltransferase (ADP) 0 0.138525 0 0.0544392 -r_1027 sulfite reductase (NADPH2) 0.00580891 0.0657215 0.00580891 0.0541553 -r_1028 taurcholate via ABC system 0 0 0 0 -r_1029 taurine dioxygenase 0 0 0 0 -r_1030 tetrahydrofolate aminomethyltransferase 0 0.290399 0 0.107696 -r_1031 tetrahydrofolate:L-glutamate gamma-ligase (ADP-forming) 0 0 0 0.00599185 -r_1032 thiamin diphosphatase 0 0 0 0 -r_1033 thiamin phosphatase 0 0 0 0 -r_1034 thiamine diphosphokinase 0 1.0839e-07 0 1.06413e-07 -r_1035 thiamine-diphosphate kinase 0 0 0 0 -r_1036 thiamine-phosphate diphosphorylase 1.056e-07 0.1089 1.056e-07 0.040386 -r_1037 thioredoxin 0 0 0 0 -r_1038 thioredoxin reductase (NADPH) 0 0.380795 0 0.264596 -r_1039 thioredoxin reductase (NADPH) 0 0 0 0 -r_1040 threonine aldolase 0 0.124457 0 0.0373145 -r_1041 threonine synthase 0.0193474 0.14937 0.0193474 0.0663036 -r_1042 threonyl-tRNA synthetase 0.0193474 0.0198585 0.0193474 0.0194963 -r_1043 threonyl-tRNA synthetase 0 0 0 0 -r_1045 thymidylate synthase 0.0003168 0.013869 0.0003168 0.00506815 -r_1046 trans-aconitate 3-methyltransferase 0 0 0 0 -r_1047 trans-pentaprenyltranstransferase 0 0 0 3.38749e-10 -r_1048 transaldolase -1.16642 0.990301 0 0.0851178 -r_1049 transketolase 1 -0.0217733 0.785428 0 0.871632 -r_1050 transketolase 2 -0.0683469 0.748436 0 0.865737 -r_1051 trehalose-phosphatase 0.0121683 0.121068 0 0.105108 -r_1054 triose-phosphate isomerase -0.00510739 0.860931 0.392579 0.507074 -r_1055 tryptophan synthase (indoleglycerol phosphate) 0.0131406 0.0575985 0.0131406 0.0132417 -r_1056 tryptophan transaminase 0 0.0126389 0 0.000101171 -r_1057 tryptophanyl-tRNA synthetase 0.00287077 0.00294661 0.00287077 0.00289287 -r_1058 tryptophanyl-tRNA synthetase 0 0 0 0 -r_1063 tyrosine transaminase -999.99 1000 0 -0.00689062 -r_1065 tyrosine transaminase 0 0 0 0 -r_1066 tyrosyl-tRNA synthetase 0.0103105 0.0105829 0.0103105 0.0103899 -r_1067 tyrosyl-tRNA synthetase 0 0 0 0 -r_1068 UDP-glucose:ergosterol glucosyltransferase 0 0 0 0 -r_1069 UDP-N-acetylglucosamine diphosphorylase 0 0 0 0 -r_1070 UDPglucose 4-epimerase 0 0 0 0 -r_1071 UDPglucose--hexose-1-phosphate uridylyltransferase -1000 0 0 -17.9651 -r_1072 UMP kinase 0 0.294736 0 0.112032 -r_1073 UMP kinase 0 0.294736 0 0.112032 -r_1074 uracil phosphoribosyltransferase 0 0.17424 0 0.0422992 -r_1075 urea carboxylase 0 0.0483999 0 0.0010613 -r_1076 ureidoglycolate hydrolase 0 0 0 0 -r_1077 uridine kinase (ATP:uridine) 0 0.290399 0 0.107696 -r_1078 uridine kinase (GTP:uridine) 0 0.290399 0 0.107696 -r_1079 uridylate kinase (dUMP) 0 0.17424 0 0.0351545 -r_1080 uridylate kinase (dUMP) 0 0.17424 0 0.0351545 -r_1081 uroporphyrinogen decarboxylase (uroporphyrinogen III) 8.8e-08 9.03249e-08 8.8e-08 8.86776e-08 -r_1082 uroporphyrinogen methyltransferase 0 0 0 0 -r_1083 uroporphyrinogen-III synthase 8.8e-08 9.03249e-08 8.8e-08 8.86776e-08 -r_1084 UTP-glucose-1-phosphate uridylyltransferase -999.868 0.567449 0 -17.1018 -r_1085 V-ATPase, Golgi 0 0.290399 0 0.107696 -r_1086 V-ATPase, vacuole 0 0.290399 0 0.107696 -r_1087 valine transaminase 0 0.059179 0 0.0175105 -r_1088 valine transaminase, mitochondiral -0.0859257 -0.0267467 -0.0267467 -0.0267467 -r_1089 valyl-tRNA synthetase 0.0267467 0.0274533 0.0267467 0.0269526 -r_1090 valyl-tRNA synthetase 0 0 0 0 -r_1091 xanthine phosphoribosyltransferase 0 0.0670152 0 0.000285391 -r_1092 xylitol dehydrogenase (D-xyulose-forming) 0 0 0 0 -r_1093 xylose reductase 0 0 0 0 -r_1094 xylulokinase 0 0 0 0 -r_1095 yUMP synthetase 0 0 0 -1.00349e-14 -r_1096 (R)-mevalonate transport -0.0237903 0 0 0 -r_1097 (R,R)-butanediol transport 0 0.0329493 0 0 -r_1098 2-methylbutyl transport 0 0.0172687 0 0.0172687 -r_1099 2-oxoadipate and 2-oxoglutarate transport 0.0289301 0.0501544 0.0267593 0.0291528 -r_1100 3-hexaprenyl-4,5-dihydroxybenzoate transport 0 0 0 0 -r_1101 4-aminobutyrate transport 0 0 0 0 -r_1102 5-aminolevulinate transport 0 0 0 0 -r_1103 5-formyltetrahydrofolic acid transport 0 0 0 0 -r_1104 8-Amino-7-oxononanoate transport 0 0 0 0 -r_1106 acetate transport 0.0872464 0.0917206 0.0872464 0.0917206 -r_1107 acetic ester transport 0 0.0357947 0 0.0354502 -r_1108 adenine transport 0 0 0 0 -r_1109 adenosine transport 0 0 0 0 -r_1110 ADP/ATP transporter 6.50882 8.02014 0 15.4601 -r_1111 ADP/ATP transporter 0 0 0 0 -r_1112 AKG transporter, mitochonrial -1000 1000 -0.692194 -1.22838 -r_1113 allantoate uniport 0 0 0 0 -r_1114 allantoin uniport 0 0 0 0 -r_1115 ammonia transport 0.629161 0.776953 0 1.46525 -r_1116 AMP/ATP transporter 0 0.17424 0 0.0237089 -r_1118 aspartate-glutamate transporter 0 1000 0 0.72291 -r_1119 biotin uptake 0 0 0 0 -r_1120 carnithine-acetylcarnithine carrier 0 0.217799 0 0.0807718 -r_1121 ceramide-2' (sphinganine:n-C24:0OH) transport 0 0.109182 0 0 -r_1122 ceramide-2' (sphinganine:n-C26:0OH) transport 0 0.109182 0 0 -r_1123 ceramide-3 (Phytosphingosine:n-C24:0OH) transport 0 0.109182 0 0 -r_1124 ceramide-3 (Phytosphingosine:n-C26:0OH) transport 0 0.109182 0 0 -r_1125 choline transport 0 0.637856 0 0.323087 -r_1126 citrate transport -1000 999.963 0 0.0246532 -r_1127 citrate transport -0.0760456 0 0 -0.0372765 -r_1128 citrate transport -1000 1000 0 0 -r_1129 coenzyme A transport 0 0.11195 0 0.023492 -r_1130 CTP transport 0 0.0794052 0 0.0295769 -r_1131 CTP/CMP antiport 0 0.0727881 0 0.0271122 -r_1132 cytidine transport 0 0 0 0 -r_1133 cytosine transport 0 0 0 0 -r_1134 D-fructose transport 0 0 0 0 -r_1135 D-galactose transport 0 0 0 0 -r_1136 D-lactate transport -0.0495234 0 0 0 -r_1137 D-lactate transport 0 1.665 0 0.762689 -r_1138 D-lactate/pyruvate antiport -1.665 0.1452 0 0 -r_1139 D-mannose transport 0 0 0 0 -r_1146 episterol transport -0.00115351 0 0 -4.99706e-05 -r_1147 ergosterol transport -0.00114947 0 0 -2.49853e-05 -r_1148 ergosterol transport 0 0 0 0 -r_1149 ethanolamine transport 0 0 0 0 -r_1151 fadH2 transport 0 9.03249e-07 0 8.86775e-07 -r_1161 fecosterol transport -0.00115351 0 0 -1.24926e-05 -r_1162 fecosterol transport 0 0 0 0.000199694 -r_1164 folic acid transport 0 0 0 0 -r_1165 GDP-mannose antiport 0 0.290399 0 0.107696 -r_1166 glucose transport 1.10101 1.1275 0 7.93 -r_1167 glutathione transport 0 0 0 0 -r_1168 glutathione transport -0.290399 0 0 0 -r_1169 glycero-3-phospho-1-inositol transport -0.0141618 0 0 -0.000819621 -r_1170 glycero-3-phosphocholine transport -0.0107525 0 0 0 -r_1171 glycerol transport 0 0.637856 0 0.323087 -r_1172 glycerol transport via channel 0.00184604 0.639702 0 0.326779 -r_1173 glycine transport -0.0794609 0 0 -0.123204 -r_1174 glycogen vacuolar 'transport' via autophagy 0 0.17424 0 0.0646174 -r_1175 GTP/GDP translocase 0 0.217799 0 0.0415949 -r_1176 guanine transport -0.020833 0 0 -0.0613557 -r_1177 inositol transport 0 0 0 0 -r_1178 iron (II) transport 2.7632e-06 2.8362e-06 0 5.56895e-06 -r_1179 iron (II) transport 8.8e-08 9.03249e-08 0 1.77355e-07 -r_1180 isoamyl acetate transport 0 0.0174602 0 0.0174602 -r_1181 isobutyl acetate transport 0 0.0207772 0 0.0207772 -r_1182 isopentenyl diphosphate transport 0 0 0 0 -r_1183 L-alanine transport -0.0529739 0 0 -0.143609 -r_1184 L-arganine transport -0.0213377 0 0 -0.00720827 -r_1185 L-arganine transport 0 1000 0 30.2127 -r_1186 L-asparagine transport -0.1089 0 0 0.228935 -r_1187 L-asparagine transport 0 500.29 0 0.369588 -r_1188 L-aspartate transport 0 500.29 0 0.369588 -r_1189 L-aspartate transport 0 0 0 0 -r_1190 L-aspartate transport -0.0397304 0.1089 0 -0.0317479 -r_1191 L-carnitine transport 0 0 0 0 -r_1192 L-cystine transport -0.0348424 0 0 0 -r_1193 L-cystine transport 0 0 0 0 -r_1194 L-glutamate transport 0 0.96373 0.0415611 0.263988 -r_1195 L-glutamate transport 0 0 0 0 -r_1196 L-glutamate transport -0.0317844 0 0 -0.0317844 -r_1197 L-glutamine transport 0 500.29 0 0.703301 -r_1198 L-glutamine transport 0 500.29 0 0.703301 -r_1199 L-glutamine transport -0.0317844 0 0 -0.414413 -r_1200 L-histidine transport, vacuolar 0 1000 0 13.6025 -r_1201 L-histidine transport -0.021571 0 0 -0.0106312 -r_1202 L-isoleucine transport -1000 1000 0 0 -r_1203 L-isoleucine transport 0 1000 0 0.347875 -r_1204 L-isoleucine transport 0 1000 0 1.85156 -r_1205 L-isoleucine transport -0.0224989 0 0 -0.0224989 -r_1206 L-lactate transport 0 0 0 0 -r_1207 L-lactate transport 0 0 0 0 -r_1208 L-leucine transport, vacuoluar -1000 1000 0 -13.074 -r_1209 L-leucine transport, vacuoluar 0 1000 0 0.53525 -r_1210 L-leucine transport, vacuoluar 0 1000 0 13.6092 -r_1211 L-leucine transport -0.0228252 0 0 -0.0228252 -r_1212 L-lysine transport 0 1000 0 17.6754 -r_1213 L-lysine transport -0.0212243 0 0 -0.000445472 -r_1214 L-methionine transport -0.0185271 0 0 5.55112e-17 -r_1215 L-phenylalanine transport -0.0154399 0 0 -0.000284804 -r_1216 L-proline transport -0.0277264 0 0 -0.0516936 -r_1217 L-serine transport -0.0529739 0 0 -0.0372194 -r_1218 L-threonine transport -0.0354689 0 0 0 -r_1219 L-tryptophan transport -0.0121701 0 0 -0.000101171 -r_1220 L-tyrosine transport -1000 1000 0 -15.0787 -r_1221 L-tyrosine transport 0 1000 0 7.16906 -r_1222 L-tyrosine transport 0 1000 0 22.2478 -r_1223 L-tyrosine transport -0.0162023 0 0 -0.000284804 -r_1224 L-valine transport -0.0288451 0 0 -0.0288451 -r_1225 lanosterol transport -0.00350903 0 0 0.00156138 -r_1226 malate transport 0 0.435599 0 0.0105588 -r_1227 maltose transport 0 0 0 0 -r_1228 N,N'-diformyldityrosine transport 0 0.00733171 0 0.000142402 -r_1229 NAD transport -1.70675e-12 2.01095e-12 0 0 -r_1230 NAD transport 0 0 0 0 -r_1231 NAD transport 0 0 0 0 -r_1232 NAD transport 0 0 0 0 -r_1235 nicotinate transport 0 0 0 0 -r_1236 octadecanoate (n-C18:0) transport -0.1089 0.0738428 0 -0.00069505 -r_1237 ornithine transport 0.0162441 0.178092 0.0162441 0.0198482 -r_1238 orntithine transport -0.0277264 0 0 -0.00360413 -r_1239 oxaloacetate transport 0 0.435599 0 0.160198 -r_1241 pantothenate transport -0.0118942 0 0 -5.23712e-05 -r_1242 pentaprenyl diphosphate transport 0 0 0 0 -r_1243 phenethyl acetate transport 0 0.012783 0 0.000284804 -r_1244 phosphate transport 0.0440439 2.0284 0 5.84919 -r_1245 phosphate transport 5.08542 7.62821 5.23227 7.12486 -r_1249 potassium transport 0.00031944 0.000327879 0 0.000641339 -r_1250 putrescine excretion 0 0 0 0 -r_1251 putrescine transport -0.0272465 0 0 -0.00430175 -r_1252 putrescine transport 0 0 0 0 -r_1253 pyridoxine symport 0 0 0 0 -r_1254 pyruvate transport -8.2615e-05 -7.8585e-05 -7.8585e-05 -8.2615e-05 -r_1255 S-adenosyl-L-methionine transport 0 0 0 0 -r_1256 S-adenosyl-L-methionine transport 0 0 0 1.01625e-09 -r_1257 S-methylmethionine permease 0 0 0 0 -r_1258 sodium proton antiporter -0.410708 -0.00034936 0 -0.1609 -r_1259 spermidine excretion 0 0 0 0 -r_1260 spermidine transport -0.0127204 0 0 -0.000144153 -r_1261 spermidine transport 0 0 0 0 -r_1262 spermine transport -0.00829697 0 0 -7.20765e-05 -r_1263 spermine transport 0 0 0 0 -r_1264 succinate transport 0 0.435599 0 0.00816 -r_1265 succinate-fumarate transport 0 4.97013 0.00126947 0.283593 -r_1266 sulfate uniport 0.00756891 0.140285 0 0.0808465 -r_1267 sulfite transport 0 0.132716 0 0.0486303 -r_1268 taurine transport 0 0 0 0 -r_1269 thiamine diphosphate transport 0 0 0 0 -r_1270 thiamine transport 0 0 0 0 -r_1271 UDPgalactose transport 0 0 0 0 -r_1272 uracil transport 0 0 0 0 -r_1273 urea transport -0.0580799 0 0 0 -r_1274 uridine transport 0 0 0 0 -r_1275 UTP transport 0 0 0 0 -r_1276 UTP/UMP antiport 0 0 0 0 -r_1277 water diffusion -5.4684 -4.43196 0 -10.1559 -r_1278 zymosterol transport -0.00117362 0 0 -2.49853e-05 -r_1449 inositol-P-ceramide B' (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1450 inositol-P-ceramide B' (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1451 inositol-P-ceramide C (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1452 inositol-P-ceramide C (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1453 inositol-P-ceramide A (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1454 inositol-P-ceramide A (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1455 inositol-P-ceramide B (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1456 inositol-P-ceramide B (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1457 inositol-P-ceramide D (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1458 inositol-P-ceramide D (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1479 inositol phosphomannosylinositol phosphoceramide A (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1480 inositol phosphomannosylinositol phosphoceramide A (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1481 inositol phosphomannosylinositol phosphoceramide B' (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1482 inositol phosphomannosylinositol phosphoceramide B' (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1483 inositol phosphomannosylinositol phosphoceramide B (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1484 inositol phosphomannosylinositol phosphoceramide B (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1485 inositol phosphomannosylinositol phosphoceramide C (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1486 inositol phosphomannosylinositol phosphoceramide C (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1487 inositol phosphomannosylinositol phosphoceramide D (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1488 inositol phosphomannosylinositol phosphoceramide D (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1509 mannosylinositol phosphorylceramide B' (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1510 mannosylinositol phosphorylceramide B' (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1511 mannosylinositol phosphorylceramide C (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1512 mannosylinositol phosphorylceramide C (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1513 mannosylinositol phosphorylceramide A (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1514 mannosylinositol phosphorylceramide A (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1515 mannosylinositol phosphorylceramide B (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1516 mannosylinositol phosphorylceramide B (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1517 mannosylinositol phosphorylceramide D (C24) [Golgi] SLIME rxn 0 0 0 0 -r_1518 mannosylinositol phosphorylceramide D (C26) [Golgi] SLIME rxn 0 0 0 0 -r_1542 (1->3)-beta-D-glucan exchange 0 0 0 0 -r_1543 (1->3)-beta-D-glucan transport 0 0 0 0 -r_1545 (R)-carnitine exchange 0 0 0 0 -r_1546 (R)-lactate exchange 0 0.0495234 0 0.0495234 -r_1547 (R)-mevalonate exchange 0 0.0237903 0 0.000149914 -r_1548 (R)-pantothenate exchange 0 0.0118942 0 0.000144153 -r_1549 (R,R)-2,3-butanediol exchange 0 0.0329493 0 0.0329493 -r_1550 (S)-3-methyl-2-oxopentanoate exchange 0 0.0237903 0 0.0237903 -r_1551 (S)-lactate exchange 0 0 0 0 -r_1552 (S)-malate exchange 0 0.0397304 0 0.0397304 -r_1553 1-(sn-glycero-3-phospho)-1D-myo-inositol exchange 0 0.0141618 0 0.000819621 -r_1554 1-acylglycerophosphocholine exchange 0 0 0 0 -r_1560 1D-myo-inositol 1,3,4,5,6-pentakisphosphate diffusion 0 0.1452 0 0.0476465 -r_1562 1D-myo-inositol 1-phosphate transport 0 0.109182 0 0 -r_1563 2'-deoxyadenosine exchange 0 0 0 0 -r_1564 2'-deoxyguanosine exchange 0 0 0 0 -r_1565 2'-deoxyinosine exchange 0 0 0 0 -r_1566 2'-deoxyuridine exchange 0 0 0 0 -r_1567 2-dehydro-3-deoxy-D-arabino-heptonate7-phohsphate transport -0.0760456 0 -0.0369917 0 -r_1568 2-dehydropantoate transport -0.011911 -1.672e-05 -1.672e-05 -1.672e-05 -r_1572 2-isopropylmalate exchange 0 0.0224989 0 0.0224989 -r_1573 2-isopropylmalate transport 0 0.0224989 0 0 -r_1574 2-isopropylmalate transport -0.0544929 0 0 -0.0544929 -r_1575 2-methyl-1-butanol transport 0 0.0228252 0 0 -r_1576 2-methyl-1-butanol transport -0.0228252 0 0 0 -r_1577 2-methylbutanal exchange 0 0.0241553 0 0.0241553 -r_1578 2-methylbutanal transport 0 0.0241553 0 0 -r_1579 2-methylbutanal transport 0 0.0228252 0 0 -r_1580 2-methylbutanol exchange 0 0.0228252 0 0.0228252 -r_1581 2-methylbutyl acetate exchange 0 0.0172687 0 0.0172687 -r_1582 2-methylpropanal transport 0 0.0316254 0 0 -r_1583 2-methylpropanal transport 0 0.0293835 0 0 -r_1585 2-oxobutanoate transporter -0.0511745 0.0436341 0 0.021946 -r_1586 2-oxoglutarate exchange 0 0.0317844 0 0.0317844 -r_1587 2-oxoglutarate transport 0 0 0 0 -r_1588 2-oxoglutarate transport -1000 1000 0 0 -r_1589 2-phenylethanol exchange 0 0.0155928 0 0.000284804 -r_1590 2-phenylethanol transport -0.0155928 0 0 0 -r_1591 2-phenylethanol transport 0 0.0155928 0 0 -r_1595 3-carboxy-4-methyl-2-oxopentanoate transport 0 0 0 0 -r_1596 3-methyl-2-oxopentanoate transport -0.0436341 0.851719 0 0 -r_1597 3-methyl-oxopentanoate trasport -0.0237903 0 0 0 -r_1598 3-methylbutanal exchange 0 0.0245317 0 0.0245317 -r_1599 3-methylbutanal transport 0 0.0245317 0 0 -r_1600 3-methylbutanal transport 0 0.023161 0 0 -r_1601 3-octaprenyl-4-hydroxybenzoate transport 0 0 0 0 -r_1603 4-amino-5-hydroxymethyl-2-methylpyrimidine synthetase 1.056e-07 1.0839e-07 1.056e-07 1.06413e-07 -r_1604 4-aminobenzoate exchange 0 0.0196359 0 3.05712e-07 -r_1605 4-aminobenzoate transport 0 0.0196359 0 0 -r_1606 4-aminobenzoate transport 5.5792e-06 5.7266e-06 5.5792e-06 5.5792e-06 -r_1607 4-aminobutanal transport 0 0.435599 0 0 -r_1608 4-aminobutyrate transport -0.435599 0 0 0 -r_1609 4-hydroxy-2-oxoglutarate transport 0 0 0 0 -r_1610 4-hydroxy-2-oxoglutarate transport 0 0 0 0 -r_1611 4-hydroxybenzoate transport 0 0 0 0 -r_1613 5'-nucleotidase (AMP) 0 0.290399 0 0.107696 -r_1614 5'-nucleotidase (dAMP) 0 0 0 0 -r_1615 5'-nucleotidase (dCMP) 0 0.290399 0 0.107696 -r_1616 5'-nucleotidase (dGMP) 0 0 0 0 -r_1617 5'-nucleotidase (dTMP) 0 0.290399 0 0.215391 -r_1618 5'-nucleotidase (dUMP) 0 0.290399 0 0.107696 -r_1619 5'-nucleotidase (GMP) 0 0.290399 0 0.107696 -r_1620 5'-nucleotidase (XMP) 0 0 0 0 -r_1621 5-aminolevulinate exchange 0 0 0 0 -r_1622 5-aminolevulinate transport -7.22599e-07 -7.04e-07 -7.04e-07 -7.04e-07 -r_1623 5-formethyltetrahydrofolate cyclo-ligase 0 0.290399 0 0.107696 -r_1624 5-formyltetrahydrofolate:10-formyltetrahydrofolate isomerase 0 0 0 0 -r_1625 5-formyltetrahydrofolic acid exchange 0 0 0 0 -r_1627 7,8-diaminononanoate exchange 0 0 0 0 -r_1628 7,8-diaminononanoate transport 0 0 0 0 -r_1629 8-amino-7-oxononanoate exchange 0 0 0 0 -r_1630 9H-xanthine exchange 0 0.020833 0 0.00329827 -r_1631 acetaldehyde exchange 0 0.0715894 0 0.0715894 -r_1632 acetaldehyde transport -1000 0 0 0 -r_1633 acetaldehyde transport -0.0715894 0 0 0 -r_1634 acetate exchange 0.0872464 0.0917206 0.0872464 0.0917206 -r_1635 acetate transport 0 0 0 0 -r_1637 acetyl-CoA transport 0 0 0 0 -r_1638 acetylcarnitine transport 0 0.0744725 0 0.0394583 -r_1639 adenine exchange 0 0 0 0 -r_1640 adenine transport 0 0 0 0 -r_1641 adenosine 3',5'-bismonophosphate exchange 0 0.0132743 0 0.00632794 -r_1642 adenosine 3',5'-bisphosphate transport -0.0871198 0 0 -0.0208824 -r_1643 adenosine exchange 0 0 0 0 -r_1644 ADP transport -0.294736 0 0 0 -r_1645 ADP transport -0.290399 0 0 0 -r_1647 AKG transporter, peroxisome -0.0686089 0 0 -8.8e-07 -r_1648 allantoate exchange 0 0 0 0 -r_1649 allantoin exchange 0 0 0 0 -r_1650 trehalose exchange 0 0.0128876 0 0.0128876 -r_1651 alpha-D-glucosamine 6-phosphate exchange 0 0.0243783 0 0.0243783 -r_1652 alpha-ketoglutarate/malate transporter -1000 1000 0 0 -r_1654 ammonium exchange -0.776953 -0.629161 -0.707082 -0.629161 -r_1656 AMP transport 0 0 0 0 -r_1657 arginine transport 0 0 0 0 -r_1658 asparagine transport 0 0 0 0 -r_1659 aspartate-glutamate transporter -0.0686089 0.0198045 0 -0.000401045 -r_1660 ATP diffusion 0 0.294736 0 0 -r_1661 ATP transport 0 0.290399 0 0 -r_1663 bicarbonate exchange 0 0 0 0 -r_1664 bicarbonate formation 0 0 0 0 -r_1665 bicarbonate formation -999.842 1000 0 -2.72919e-11 -r_1667 bicarbonate formation -999.842 1000 0.267816 0 -r_1668 bicarbonate formation 0 0 0 0 -r_1669 bicarbonate transport -1000 999.842 0 53.4215 -r_1671 biotin exchange 0 0 0 0 -r_1672 carbon dioxide exchange 2.6325 2.7675 2.6325 2.75603 -r_1673 carnitine transport 0 0.0744725 0 0.0394583 -r_1674 carnitine-acetylcarnitine carrier 0 0.0744725 0 0.0394583 -r_1675 CDP transport 0 0 0 0 -r_1676 ceramide transport -0.109182 0 0 0 -r_1677 ceramide transport -0.109182 0 0 0 -r_1678 ceramide transport -0.109182 0 0 0 -r_1679 ceramide transport -0.109182 0 0 0 -r_1680 ceramide transport -0.109182 0 0 0 -r_1681 ceramide transport -0.109182 1.13687e-12 0 0 -r_1682 cholestenol delta-isomerase, lumped reaction 0 0.00440154 0.00321939 0.0032702 -r_1683 choline exchange 0 0.0155601 0 0.000111964 -r_1684 choline transport 0 0.1089 0 0.00424065 -r_1685 chorismate pyruvate lyase 0 0 0 3.38749e-10 -r_1686 citrate transport -0.026487 0 0 0 -r_1687 citrate exchange 0 0.026487 0 0.026487 -r_1688 citrate/isocitrate antiport -0.0198045 0 0 0 -r_1689 citrate/malate antiport -0.0185401 0.0814337 0 0 -r_1690 CMP nucleosidase 0 0.0806797 0 0.0325521 -r_1691 CO2 transport 0 0 0 0 -r_1694 CO2 transport -1000 999.842 0 -0.332615 -r_1695 CO2 transport -0.0198045 0 0 0 -r_1696 CO2 transport -4.75047 -1.40374 -2.60358 -2.5413 -r_1697 CO2 transport 2.6325 2.7675 2.66554 2.6325 -r_1698 coenzyme A transport -0.17424 0 0 -0.0646174 -r_1699 coenzyme A transport 0 0 0 0 -r_1700 coenzyme A transport -0.055975 0.108906 0 0 -r_1702 cytidine exchange 0 0 0 0 -r_1703 cytidylate kinase (CMP) 0 0.291966 0 0.109263 -r_1704 cytidylate kinase (dCMP) -0.0140802 0.174028 0 0.0599003 -r_1705 cytosine exchange 0 0 0 0 -r_1706 D-arabinose exchange 0 0 0 0 -r_1707 D-arabinose transport 0 0 0 0 -r_1708 D-erythrose 4-phosphate transport 0 0.0760456 0.0369917 0 -r_1709 D-fructose exchange 0 0 0 0 -r_1710 D-galactose exchange 0 0 0 0 -r_1711 D-galacturonate exchange 0 0 0 0 -r_1712 D-glucitol exchange 0 0 0 0 -r_1713 D-glucosamine 6-phosphate uniport -0.0243783 0 0 0 -r_1714 D-glucose exchange -1.1275 -1.10101 -1.1275 -1.10101 -r_1715 D-mannose exchange 0 0 0 0 -r_1716 D-ribose exchange 0 0 0 0 -r_1717 D-sorbitol transport 0 0 0 0 -r_1718 D-xylose exchange 0 0 0 0 -r_1719 D-xylose transport 0 0 0 0 -r_1720 dADP transport 0 0 0 0 -r_1721 dCDP transport 0 0 0 0 -r_1722 ATP deamination 0 0.0871198 0 0.0323087 -r_1723 dATP deamination 0 0 0 0 -r_1724 ADP deamination 0 0.124457 0 0.0461553 -r_1725 dADP deamination 0 0 0 0 -r_1726 deamino-NAD+ diffusion 0 0 0 0 -r_1727 decanoate exchange 0 0.00816783 0 0.00491827 -r_1728 deoxyadenosine transport 0 0 0 0 -r_1729 deoxyadenylate kinase -0.00032517 0.173923 0 0.0639814 -r_1730 deoxycytidine exchange 0 0 0 0 -r_1731 deoxycytidine transport 0 0 0 0 -r_1732 deoxyguanosine transport 0 0 0 0 -r_1733 deoxyinosine transport 0 0 0 0 -r_1734 deoxyuridine kinase (ATP:deoxyuridine) 0 0.290399 0 0.107696 -r_1735 deoxyuridine transport 0 0 0 0 -r_1736 dephospho-CoA kinase 0 0.0871365 0 0.00388729 -r_1737 dGDP transport 0 0 0 0 -r_1738 dhnpt transport 5.5792e-06 5.7266e-06 5.5792e-06 5.5792e-06 -r_1739 diamine transaminase 0 0 0 0 -r_1743 dihydrofolate transport 0 0 0 0 -r_1744 dihydroneopterin triphosphate pyrophosphatase 0 5.7266e-06 0 5.62216e-06 -r_1745 dihydropteroate transport -5.7266e-06 -5.5792e-06 -5.5792e-06 -5.5792e-06 -r_1746 dihydroxyacetone phosphate transport -0.443557 4.9607 0 0 -r_1747 diphosphate transport -0.17424 0 0 1.13687e-13 -r_1748 dolichol phosphate transport -0.0642155 -0.0625627 -0.0625627 -0.0625627 -r_1749 dTTP exchange 0 0.012782 0 0.00475135 -r_1750 dTTP uniport -0.012782 0 0 0 -r_1751 dUDP diffusion -0.17424 0 0 0 -r_1752 dUMP transport 0 0.17424 0 0 -r_1753 episterol exchange 0 0.00115351 0 2.49853e-05 -r_1754 ergosta-5,6,22,24,(28)-tetraen-3beta-ol transport 0.00324521 0.00439763 0.00324521 0.00324521 -r_1757 ergosterol exchange 0 0.00114947 0 2.49853e-05 -r_1758 ergosterol transport -999.997 1000 0 0 -r_1759 ergosterol transport -0.17424 0 0 0 -r_1761 ethanol exchange 9.75e-06 1.025e-05 9.75e-06 1.025e-05 -r_1762 ethanol transport 9.75e-06 1.025e-05 9.75e-06 9.75e-06 -r_1763 ethanol transport, mitochondrial -1000 0.35847 0 0 -r_1764 ethanolamine exchange 0 0 0 0 -r_1765 ethyl acetate exchange 0 0.0357947 0 0.0354502 -r_1766 farnesyl diphosphate transport 8.8e-08 9.03249e-08 8.8e-08 8.8e-08 -r_1770 fatty acid transport -0.00816783 0 0 -0.00491827 -r_1771 fatty acid transport -0.1089 0 0 -0.00512247 -r_1772 fatty acid transport -0.1089 0.0738428 0 -0.00500727 -r_1774 fatty acid transport -0.1089 0.0738428 0 -0.000938442 -r_1775 fatty acid transport -0.1089 0.0106844 0 -0.00545102 -r_1776 fatty acid transport -0.00927405 0 0 -0.00505174 -r_1777 myristate (n-C14:0) transport -0.0065946 0 0 0 -r_1788 fecosterol exchange 0 0.00115351 0 2.49853e-05 -r_1790 FMN adenylyltransferase 0 9.03249e-07 0 8.86775e-07 -r_1791 FMN exchange 0 0 0 0 -r_1792 folic acid exchange 0 0 0 0 -r_1793 formate exchange 0 0.158922 0 0.074139 -r_1794 formate transport 0 0.226724 0 0.122531 -r_1795 formate transport -0.158922 0 0 -0.074139 -r_1796 formate transport -0.0397304 0 0 0 -r_1797 fructose-1-phosphate kinase 0 0 0 0 -r_1798 fumarate exchange 0 0.0397304 0 0.0397304 -r_1800 gamma-aminobutyrate exchange 0 0 0 0 -r_1801 GDP transport -0.290399 0 0 -0.107696 -r_1802 GDP transport 0 0 0 0 -r_1803 GDP-alpha-D-mannose transport -0.290399 0 0 -0.107696 -r_1805 glucose transport, vacuolar -0.217799 0 0 -0.0807718 -r_1806 glutathione disulfide exchange 0 0 0 0 -r_1807 glutathione exchange 0 0 0 0 -r_1808 glycerol exchange 0.00184604 0.00194071 0.00184604 0.00194071 -r_1809 glycerol-3-phosphate shuttle -0.443557 4.9607 0 0 -r_1810 L-glycine exchange 0 0.0794609 0 0.0712804 -r_1811 glycine transport -0.196636 0.462705 0 0 -r_1812 glycoaldehyde transport -5.7266e-06 -5.5792e-06 -5.5792e-06 -5.5792e-06 -r_1813 glycoaldehyde transport -5.83499e-06 -5.6848e-06 -5.6848e-06 -5.6848e-06 -r_1814 glycolaldehyde exchange 5.6848e-06 5.83499e-06 5.6848e-06 5.72857e-06 -r_1815 glyoxylate exchange 0 0.0794609 0 0.0566454 -r_1816 glyoxylate transport 0 0.0794609 0 0.0566454 -r_1817 glyoxylate transport 0 0.0686089 0 0 -r_1818 guanine exchange 0 0.020833 0 0.00329827 -r_1819 guanine transport 0 0 0 0 -r_1820 guanosine exchange 0 0 0 0 -r_1821 guanosine kinase 0 0.290399 0 0.107696 -r_1822 guanosine transport 0 0 0 0 -r_1823 guanosine transport 0 0 0 0 -r_1824 H+ diffusion 0 0.637856 0 0.323087 -r_1825 H+ diffusion -0.28416 0.00999946 0 0 -r_1826 H+ diffusion -0.580799 0 0 0 -r_1827 H+ diffusion -0.17424 0.150772 0 0 -r_1829 H+ diffusion -1000 999.958 0 -0.0476465 -r_1830 H+ diffusion -0.108906 0.0855993 0 0 -r_1831 H+ diffusion -0.580799 1000 0 -0.00757784 -r_1832 H+ exchange -0.682283 0.384356 -0.367515 0.147659 -r_1833 hexacosanoyl-CoA transport 0 0.17424 0 0 -r_1834 hexadecanal exchange 0 0 0 0 -r_1835 hexadecanoate (n-C16:0) transport -0.00601529 0 0 -0.00521873 -r_1836 hexadecenoate (n-C16:1) transport -0.00592925 0 0 -0.00526512 -r_1837 L-histidine transport, mitochondrial 0 0 0 0 -r_1838 homocitrate synthase 0.0289301 0.0501544 0.0287073 0.0291528 -r_1839 hydrogen peroxide transport 0 0 0 0 -r_1840 hydroxymethylglutaryl-CoA transport -0.0432618 0 0 0 -r_1841 hypoxanthine exchange 0 0.026184 0 0.00878879 -r_1842 hypoxanthine transport -0.026184 0 0 0 -r_1843 indol-3-ylacetaldehyde exchange 0 0.0126389 0 0.000101171 -r_1844 indole-3-acetaldehyde transport 0 0.0122649 0 0 -r_1845 indole-3-acetaldehyde transport 0 0.0126389 0 0 -r_1846 indole-3-acetate transport 0 0 0 0 -r_1847 inosine exchange 0 0 0 0 -r_1848 inosine transport 0 0 0 0 -r_1849 inositol hexakisphosphate transport -0.1452 0 0 0 -r_1850 insosine kinase 0 0.290405 0 0.107701 -r_1851 IPC transport 0 0.109182 0 0 -r_1852 IPC transport 0 0.109182 0 0 -r_1853 IPC transport 0 0.109182 0 0 -r_1854 IPC transport 0 0.109182 0 0 -r_1855 IPC transport 0 0.109182 0 0 -r_1856 IPC transport 0 0.109182 0 0 -r_1857 IPC transport 0 0.109182 0 0 -r_1858 IPC transport 0 0.109182 0 0 -r_1859 IPC transport 0 0.109182 0 0 -r_1860 IPC transport 0 0.109182 0 0 -r_1861 iron(2+) exchange -2.8362e-06 -2.7632e-06 -2.78447e-06 -2.7632e-06 -r_1862 isoamyl acetate exchange 0 0.0174602 0 0.0174602 -r_1863 isoamyl alcohol transport 0 0.023161 0 0 -r_1864 isoamyl alcohol transport -0.023161 0 0 0 -r_1865 isoamylol exchange 0 0.023161 0 0.023161 -r_1866 isobutanol exchange 0 0.0293835 0 0.0293835 -r_1867 isobutyl acetate exchange 0 0.0207772 0 0.0207772 -r_1868 isobutyl alcohol transport 0 0.0293835 0 0 -r_1869 isobutyl alcohol transport -0.0293835 0 0 0 -r_1870 isobutyraldehyde exchange 0 0.0316254 0 0.0316254 -r_1871 L-1-pyrroline-3-hydroxy-5-carboxylate spontaneous conversion to L-4-hydroxyglutamate semialdehyde 0 1000 0 0.0088369 -r_1872 L-2-amino-3-oxobutanoate decarboxylation (spontaneous) 0 0 0 0 -r_1873 L-alanine exchange 0 0.0529739 0 0.0529739 -r_1874 L-alanine transport 0 0.435599 0 0.0604528 -r_1875 L-arabinitol exchange 0 0 0 0 -r_1876 L-arabinitol transport 0 0 0 0 -r_1877 L-arabinoase transport 0 0 0 0 -r_1878 L-arabinose exchange 0 0 0 0 -r_1879 L-arginine exchange 0 0.0213377 0 0.00360413 -r_1880 L-asparagine exchange 0 0.0397304 0 0.00798259 -r_1881 L-aspartate exchange 0 0.0397304 0 0.0397304 -r_1882 L-carnitine transport 0 0.217799 0 0.0807718 -r_1883 L-cysteine exchange 0 0.0348424 0 0.0348424 -r_1884 L-erythro-4-hydroxyglutamate transport 0 0 0 0 -r_1885 L-erythro-4-hydroxyglutamate transport 0 0 0 0 -r_1886 L-glucitol exchange 0 0 0 0 -r_1887 L-glutamate 5-semialdehyde dehydratase 0.0166484 0.161848 0.0166484 0.0584383 -r_1889 L-glutamate exchange 0 0.0317844 0 0.0317844 -r_1890 L-glutamate transport 0 0 0 0 -r_1891 L-glutamine exchange 0 0.0317844 0 0.0317844 -r_1892 L-glutamine transport 0 0 0 0 -r_1893 L-histidine exchange 0 0.021571 0 0.0106312 -r_1895 L-homoserine transport -0.0371426 0 0 0 -r_1896 L-homoserine exchange 0 0.0371426 0 0.0371426 -r_1897 L-isoleucine exchange 0 0.0224989 0 0.0224989 -r_1898 L-isoleucine transport 0 0.871198 0 0.200248 -r_1899 L-leucine exchange 0 0.0228252 0 0.0228252 -r_1900 L-lysine exchange 0 0.0212243 0 0.000222736 -r_1901 L-malate transport -1000 1000 0 0 -r_1902 L-methionine exchange 0 0.0185271 0 0.00889088 -r_1903 L-phenylalanine exchange 0 0.0154399 0 0.000284804 -r_1904 L-proline exchange 0 0.0277264 0 0.0275775 -r_1905 L-proline transport 0 0.1452 0 0 -r_1906 L-serine exchange 0 0.0529739 0 0.0372194 -r_1907 L-serine transport 0 0 0 0 -r_1908 L-sorbitol transport 0 0 0 0 -r_1909 L-sorbose exchange 0 0 0 0 -r_1910 L-sorbose transport 0 0 0 -0.016198 -r_1911 L-threonine exchange 0 0.0354689 0 0.0335279 -r_1912 L-tryptophan exchange 0 0.0121701 0 0.000101171 -r_1913 L-tyrosine exchange 0 0.0162023 0 0.000284804 -r_1914 L-valine exchange 0 0.0288451 0 0.0288451 -r_1915 lanosterol exchange 0 0.00350903 0 2.49853e-05 -r_1916 laurate exchange 0 0.00729739 0 0.00481995 -r_1919 lysine transport 0 0 0 0 -r_1920 M(IP)2C transport 0 0 0 0 -r_1921 M(IP)2C transport 0 0 0 0 -r_1922 M(IP)2C transport 0 0 0 0 -r_1923 M(IP)2C transport 0 0 0 0 -r_1924 M(IP)2C transport 0 0 0 0 -r_1925 M(IP)2C transport 0 0 0 0 -r_1926 M(IP)2C transport 0 0 0 0 -r_1927 M(IP)2C transport 0 0 0 0 -r_1928 M(IP)2C transport 0 0 0 0 -r_1929 M(IP)2C transport 0 0 0 0 -r_1930 malate/oxaloacetate shuttle 0 0.152688 0 0 -r_1931 maltose exchange 0 0 0 0 -r_1932 mannan transport -0.0642155 -0.0625627 -0.0625627 -0.0625627 -r_1935 methionine transport 0 0 0 0 -r_1936 methylglyoxal synthase 0 0.146425 0 0.0560293 -r_1937 MIPC transport 0 0 0 0 -r_1938 MIPC transport 0 0 0 0 -r_1939 MIPC transport 0 0 0 0 -r_1940 MIPC transport 0 0 0 0 -r_1941 MIPC transport 0 0 0 0 -r_1942 MIPC transport 0 0 0 0 -r_1943 MIPC transport 0 0 0 0 -r_1944 MIPC transport 0 0 0 0 -r_1945 MIPC transport 0 0 0 0 -r_1946 MIPC transport 0 0 0 0 -r_1947 myo-inositol exchange 0 0 0 0 -r_1952 N,N'-diformyldityrosine exchange 0 0.00733171 0 0.000142402 -r_1963 NADP(+) transport -0.00999946 -0.00649043 -0.00649043 -0.00649043 -r_1964 NADPH transport 0.00649043 0.00999946 0.00649043 0.00649043 -r_1965 NH3 transport -0.305739 0.342848 0 0 -r_1966 nicotinamide diffusion 0 0 0 0 -r_1967 nicotinate exchange 0 0 0 0 -r_1968 NMN exchange 0 0 0 0 -r_1970 NMN transport 0 0 0 0 -r_1971 NMN transport 0 0 0 0 -r_1972 NMN transport 0 0 0 0 -r_1974 nucleoside-diphosphatase (dGDP) 0 0.290399 0 0.107696 -r_1975 nucleoside-triphosphatase (dGTP) 0 0.290399 0 0.107696 -r_1976 O-acetylcarnintine transport into mitochondria 0 0.217799 0 0.0807718 -r_1977 O2 transport 0.00324521 0.00675425 0.00324521 0.00324521 -r_1978 O2 transport 2.38478 2.48506 2.42197 2.38478 -r_1979 O2 transport 2.46221 2.5625 2.46221 2.46222 -r_1980 O2 transport 0 0.0524944 0 0.000173656 -r_1981 octadecanoate (n-C18:0) transport -0.00530952 0 0 -0.00457395 -r_1984 octanoate exchange 0 0.00927405 0 0.00505174 -r_1987 ornithine exchange 0 0.0277264 0 0.00360413 -r_1988 oxaloacetate transport 0 0.0397304 0 0 -r_1989 oxaloacetate(2-) exchange 0 0.0397304 0 0.0379503 -r_1990 oxidized glutathione uniport 0 0 0 0 -r_1991 oxidized thioredoxin transport -0.0524944 0 0 0 -r_1992 oxygen exchange -2.5625 -2.46221 -2.5625 -2.46221 -r_1993 palmitate exchange 0 0.00601529 0 0.00521873 -r_1994 palmitoleate exchange 0 0.00592925 0 0.00526512 -r_1995 palmitoyl-CoA transport 0 0 0 0 -r_1996 panthetheine 4'-phosphate transport -0.0871198 1.71617e-05 0 0 -r_1997 panthetheine-phosphate adenylyltransferase 0 0.0490611 0 0.0190816 -r_1998 PAP uniport -0.0132743 0 0 0 -r_1999 pectin exchange 0 0 0 0 -r_2000 phenethyl acetate exchange 0 0.012783 0 0.000284804 -r_2001 phenylacetaldehyde exchange 0 0.0162023 0 0.000284804 -r_2002 phenylacetaldehyde transport 0 0.0162023 0 0 -r_2003 phenylacetaldehyde transport 0 0.0155928 0 0 -r_2004 phenylalanine transport 0 0 0 0 -r_2005 phosphate exchange -2.0284 -0.0440439 -1.40997 -0.42672 -r_2008 phosphate transport 0 0 0 0 -r_2020 potassium exchange -0.000327879 -0.00031944 -0.000321899 -0.00031944 -r_2022 protoporphyrinogen IX transport 8.8e-08 9.03249e-08 8.8e-08 8.8e-08 -r_2023 PRPP transport 0 0 0 0 -r_2024 putrescine exchange 0 0.0272465 0 0.00360413 -r_2025 pyridoxal kinase 0 0 0 0 -r_2026 pyridoxamine kinase 0 0.290399 0 0.107696 -r_2027 pyridoxamine phosphatase 0 0.290399 0 0.107696 -r_2028 pyridoxine exchange 0 0 0 0 -r_2029 pyridoxine kinase 0 0 0 0 -r_2030 pyrimidine phosphatase 8.8e-05 9.03249e-05 8.8e-05 8.86775e-05 -r_2031 pyrimidine-nucleoside phosphorylase (uracil) -0.290399 0.17424 0 -0.0653964 -r_2032 pyrophosphate transport -0.0895888 0.956783 0.513707 0.189756 -r_2033 pyruvate exchange 7.8585e-05 8.2615e-05 7.8585e-05 8.2615e-05 -r_2034 pyruvate transport 0 1.665 0 0.790388 -r_2036 quinolinate transport 0 0 0 0 -r_2037 reduced thioredoxin transport 0 0.0524944 0 0 -r_2038 riboflavin exchange 0 0 0 0 -r_2039 riboflavin transport 0 9.03249e-07 0 8.86775e-07 -r_2040 riboflavin transport 0 0 0 0 -r_2041 ribose transporter 0 0 0 0 -r_2042 S-adenosyl-L-homocysteine transport 0 0 0 2.27374e-13 -r_2043 S-adenosyl-L-methionine exchange 0 0 0 0 -r_2044 S-methyl-L-methionine exchange 0 0 0 0 -r_2045 serine transport -0.213161 0.196637 0 0.0612831 -r_2046 sn-glycero-3-phosphocholine exchange 0 0.0107525 0 0.000111964 -r_2049 sodium exchange -0.00035859 -0.00034936 -0.00035205 -0.00034936 -r_2050 spermidine acetyltransferase 0 0 0 0 -r_2051 spermidine exchange 0 0.0127204 0 0.000144153 -r_2052 spermine exchange 0 0.00829697 0 7.20765e-05 -r_2053 squalene transport 0.00324521 0.00675425 0.00324521 0.00324521 -r_2054 squalene-2,3-epoxide transport 0.00324521 0.00675425 0.00324521 0.00324521 -r_2055 stearate exchange 0 0.00530952 0 0.00457395 -r_2056 succinate exchange 9.75e-06 1.025e-05 9.75e-06 1.025e-05 -r_2057 succinate transport -1.025e-05 -9.75e-06 -9.75e-06 -9.75e-06 -r_2058 sucrose exchange 0 0 0 0 -r_2060 sulphate exchange -0.140285 -0.00756891 -0.0562007 -0.00756891 -r_2061 sulphite exchange 0 0.132716 0 0.0486303 -r_2062 taurine exchange 0 0 0 0 -r_2063 tetracosanoyl-CoA transport 0 0.17424 0 0 -r_2064 thiamin phosphatase 0 0.1089 0 0.0403859 -r_2065 thiaminase 0 0.1089 0 0.0403859 -r_2066 thiamine(1+) diphosphate(1-) exchange 0 0 0 0 -r_2067 thiamine(1+) exchange 0 0 0 0 -r_2068 thiamine(1+) monophosphate exchange 0 0 0 0 -r_2069 thiamine-phosphate kinase 0 1.0839e-07 0 1.06413e-07 -r_2070 thiazole phosphate synthesis (ribose 5-phosphate) 0 1.0839e-07 0 1.06413e-07 -r_2071 thiazole phosphate synthesis (xylulose 5-phosphate) 0 1.0839e-07 0 1.06413e-07 -r_2072 threonine transport 0 0.0706533 0 0.0446137 -r_2073 thymidine exchange 0 0.0135522 0 0.00475135 -r_2074 thymidine kinase (ATP:thymidine) 0 0.290399 0 0.107696 -r_2075 thymidine transport -0.0135522 0 0 0 -r_2079 trehalose transporter 0 0.0128876 0 0 -r_2080 trehalose vacuolar transport 0 0.1089 0 0 -r_2082 tryptophan transport 0 0 0 0 -r_2083 tryptophol exchange 0 0.0122649 0 0.000101171 -r_2084 tryptophol transport 0 0.0122649 0 0 -r_2085 tryptophol transport -0.0122649 0 0 0 -r_2086 tyrosine transport 0 0 0 0 -r_2087 tyrosine transport 0 0 0 0 -r_2089 UMP transport 0 0.294736 0 0 -r_2090 uracil exchange 0 0 0 0 -r_2091 urea exchange 0 0.0580799 0 0.0010613 -r_2092 uridine exchange 0 0 0 0 -r_2093 valine transport -0.0859257 -0.0267467 -0.0267467 -0.0267467 -r_2094 water diffusion -0.00675425 0.287154 0 0.0979101 -r_2095 water diffusion 0 0.290399 0 0 -r_2096 water diffusion -12.5086 -8.63816 -9.89462 -9.89462 -r_2097 water diffusion -999.842 1000 0 -53.4215 -r_2098 water diffusion -0.0495111 0.17424 0 8.86775e-07 -r_2099 water diffusion -0.0317844 0.17424 0 -0.00128924 -r_2100 water exchange 4.43196 5.4684 4.59466 5.07796 -r_2101 xanthine transport -0.020833 0 0 0 -r_2102 xanthosine exchange 0 0 0 0 -r_2103 xanthosine transport 0 0 0 0 -r_2104 xylitol exchange 0 0 0 0 -r_2105 xylitol transport 0 0 0 0 -r_2106 zymosterol exchange 0 0.00117362 0 2.49853e-05 -r_2107 zymosterol transport -0.00117362 0.17424 0 0.00295816 -r_2108 lipid pseudoreaction - merge 0.088 0.0903249 0.088 0.0886775 -r_2111 growth 0.088 0.0903249 0.088 0.0886775 -r_2112 kynurenine aminotransferase 0 0 0 0 -r_2113 spontaneous kynurenic acid to quinaldic acid 0 0 0 0 -r_2114 spontaneous 2-amino-3-carboxymuconate-6-semialdehyde to quinolinate 0.0102698 0.0137972 0.0102698 0.0103489 -r_2115 alcohol dehydrogenase, (acetaldehyde to ethanol) 0 1000 0 660.961 -r_2116 acetaldehyde dehydrogenase 0 0.345647 0 0.439521 -r_2117 phenylalanine transaminase -1000 999.999 0 -2.2656 -r_2118 tryptophan transaminase 0 0.0126389 0 0.000101171 -r_2119 tyrosine transaminase -999.99 1000 0 4.68146 -r_2125 coenzyme A: cytoplasm to LP -1000 1000 0 0 -r_2126 sedoheptulose bisphosphatase 0 0.290399 0 0.0107694 -r_2129 proton leak 0 0.871198 0 0.323087 -r_2131 isocitrate dehydrogenase 0 0.264511 0 0.127677 -r_2132 oxoglutarate/malate exchange 0 1000 0 0.493009 -r_2134 14-demethyllanosterol exchange 0 0.00339262 0 2.49853e-05 -r_2136 14-demethyllanosterol transport -0.00339262 0 0 0 -r_2137 ergosta-5,7,22,24(28)-tetraen-3beta-ol exchange 0 0.00115351 0 2.49853e-05 -r_2139 ergosta-5,7,22,24(28)-tetraen-3beta-ol transport -0.00115351 0 0 0 -r_2140 fatty-acyl-CoA synthase (n-C16:0CoA) 0 0.025555 0.00982769 0.0177054 -r_2141 fatty-acyl-CoA synthase (n-C18:0CoA) 0 0.0228726 0.00242565 0.00930415 -r_2142 B-ketoacyl-ACP synthase (acetoacetyl-ACP) 0 0 0 0 -r_2143 B-ketoacyl-ACP synthase (3-oxo-hexanoyl-ACP) 0 0 0 0 -r_2144 B-ketoacyl-ACP synthase (3-oxo-octanoyl-ACP) 0 0 0 0 -r_2145 3-oxoacyl-ACP reductase (3-hydroxybutanoyl-ACP) 0 0 0 0 -r_2146 3-oxoacyl-ACP reductase (3-hydroxyhexanoyl-ACP) 0 0 0 0 -r_2147 3-oxoacyl-ACP reductase (3-hydroxyoctanoyl-ACP) 0 0 0 0 -r_2148 3-hydroxyacyl-thioester dehydratase (trans-but-2-enoyl-ACP) 0 0 0 0 -r_2149 3-hydroxyacyl-thioester dehydratase (trans-hex-2-enoyl-ACP) 0 0 0 0 -r_2150 3-hydroxyacyl-thioester dehydratase (trans-oct-2-enoyl-ACP) 0 0 0 0 -r_2151 enoyl-ACP reductase (butanoyl-ACP) 0 0 0 0 -r_2152 enoyl-ACP reductase (hexanoyl-ACP) 0 0 0 0 -r_2153 enoyl-ACP reductase (octanoyl-ACP) 0 0 0 0 -r_2154 elongase I (3-oxotetradecanoyl-CoA) 0 0.0738428 0 0.000388549 -r_2155 elongase I (3-oxopalmitoyl-CoA) 0 0.0738428 0 0.000645373 -r_2156 elongase II (3-oxooctadecanoyl-CoA) 0 0.0772564 0 0.000987878 -r_2157 elongase II or III (3-oxoicosanoyl-CoA) 0 0.0440043 0 0.00530899 -r_2158 elongase II or III (3-oxodocosanoyl-CoA) 0 0.027573 0 0.00399729 -r_2159 elongase II or III (3-oxotetracosanoyl-CoA) 0 0.0200765 0 0.00266486 -r_2160 elongase III (3-oxohexacosanoyl-CoA) 0 0.0157849 0 0.00199864 -r_2161 B-ketoacyl-CoA reductase ((S)-3-hydroxytetradecanoyl-CoA) 0 0.0738428 0 0.000388549 -r_2162 B-ketoacyl-CoA reductase ((S)-3-hydroxypalmitoyl-CoA) 0 0.0738428 0 0.000645373 -r_2163 B-ketoacyl-CoA reductase (3-hydroxyoctadecanoyl-CoA) 0 0.0772564 0 0.000987878 -r_2164 B-ketoacyl-CoA reductase (3-hydroxyicosanoyl-CoA) 0 0.0440043 0 0.00530899 -r_2165 B-ketoacyl-CoA reductase (3-hydroxydocosanoyl-CoA) 0 0.027573 0 0.00399729 -r_2166 B-ketoacyl-CoA reductase (3-hydroxytetracosanoyl-CoA) 0 0.0200765 0 0.00266486 -r_2167 B-ketoacyl-CoA reductase ((S)-3-hydroxyhexacosanoyl-CoA) 0 0.0157849 0 0.00199864 -r_2168 B-hydroxyacyl-CoA dehydratase (trans-tetradec-2-enoyl-CoA) 0 0.0738428 0 0.000388549 -r_2169 B-hydroxyacyl-CoA dehydratase (trans-hexadec-2-enoyl-CoA) 0 0.0738428 0 0.000645373 -r_2170 B-hydroxyacyl-CoA dehydratase (trans-octadec-2-enoyl-CoA) 0 0.0772564 0 0.000987878 -r_2171 B-hydroxyacyl-CoA dehydratase (trans-icos-2-enoyl-CoA) 0 0.0440043 0 0.00530899 -r_2172 B-hydroxyacyl-CoA dehydratase (trans-docos-2-enoyl-CoA) 0 0.027573 0 0.00399729 -r_2173 B-hydroxyacyl-CoA dehydratase (trans-tetracos-2-enoyl-CoA) 0 0.0200765 0 0.00266486 -r_2174 B-hydroxyacyl-CoA dehydratase (trans-hexacos-2-enoyl-CoA) 0 0.0157849 0 0.00199864 -r_2175 trans-2-enoyl-CoA reductase (n-C14:0CoA) 0 0.0738428 0 0.000388549 -r_2176 trans-2-enoyl-CoA reductase (n-C16:0CoA) 0 0.0738428 0 0.000645373 -r_2177 trans-2-enoyl-CoA reductase (n-C18:0CoA) 0 0.0772564 0 0.000987878 -r_2178 trans-2-enoyl-CoA reductase (n-C20:0CoA) 0 0.0440043 0 0.00530899 -r_2179 trans-2-enoyl-CoA reductase (n-C22:0CoA) 0 0.027573 0 0.00399729 -r_2180 trans-2-enoyl-CoA reductase (n-C24:0CoA) 0 0.0200765 0 0.00266486 -r_2181 trans-2-enoyl-CoA reductase (n-C26:0CoA) 0 0.0157849 0 0.00199864 -r_2182 palmitoyl-CoA desaturase (n-C16:0CoA -> n-C16:1CoA), ER membrane 0.00820814 0.0188925 0.00820814 0.0139426 -r_2183 stearoyl-CoA desaturase (n-C18:0CoA -> n-C18:1CoA), ER membrane 0.00271248 0.0225169 0.00271248 0.00799746 -r_2184 octanoate (n-C8:0) transport -0.00927405 0 0 0 -r_2185 decanoate (n-C10:0) transport -0.00816783 0 0 0 -r_2186 laurate (n-C12:0) transport -0.00729739 0 0 -0.00481995 -r_2187 butyrate exchange 0 0.0102093 0 0.00524464 -r_2188 hexanoate exchange 0 0.0103734 0 6.94622e-05 -r_2189 oleate exchange 0 0.00524236 0 0.00460954 -r_2190 butyrate (n-C4:0) transport -0.0102093 0 0 0 -r_2191 hexanoate (n-C6:0) transport -0.0103734 0 0 0 -r_2192 octadecenoate (n-C18:1) transport -0.00524236 0 0 -0.00460954 -r_2193 myristate exchange 0 0.0065946 0 0.00473057 -r_2194 fatty-acid--CoA ligase (dodecanoate), ER membrane -1000 1000 0 2.9698e-05 -r_2195 fatty-acid--CoA ligase (tetradecanoate), ER membrane -1000 1000 0 -0.000468145 -r_2196 fatty-acid--CoA ligase (hexadecanoate), ER membrane -1000 1000 0 -0.000863132 -r_2197 fatty-acid--CoA ligase (hexadecenoate), ER membrane -1000 1000 0 -0.00125894 -r_2198 fatty-acid--CoA ligase (octadecanoate), ER membrane -1000 1000 0 -0.00392857 -r_2199 fatty-acid--CoA ligase (octadecenoate), ER membrane -1000 1000 0 -0.00396417 -r_2200 fatty-acid--CoA ligase (dodecanoate), lipid particle -1000 1000 0 2.9698e-05 -r_2201 fatty-acid--CoA ligase (tetradecanoate), lipid particle -1000 1000 0 -0.000507431 -r_2202 fatty-acid--CoA ligase (hexadecanoate), lipid particle -1000 1000 0 -0.00457336 -r_2203 fatty-acid--CoA ligase (hexadecenoate), lipid particle -1000 1000 0 -0.00513374 -r_2204 fatty-acid--CoA ligase (octadecanoate), lipid particle -1000 1000 0 -0.000468765 -r_2205 fatty-acid--CoA ligase (octadecenoate), lipid particle -1000 1000 0 -0.000468455 -r_2206 fatty-acid--CoA ligase (hexadecenoate), peroxisome -0.1089 0.17424 0 1.6576e-05 -r_2207 fatty-acid--CoA ligase (octadecanoate), peroxisome -0.1089 0.17424 0 -0.00069505 -r_2208 fatty-acid--CoA ligase (octadecenoate), peroxisome -0.1089 0.17424 0 1.6576e-05 -r_2209 fatty-acid--CoA ligase (arachidate), cell envelope 0 0 0 0 -r_2210 fatty-acid--CoA ligase (behenate), cell envelope 0 0 0 0 -r_2211 fatty-acid--CoA ligase (lignoceric acid), cell envelope -1000 1000 0 8.50035e-05 -r_2212 fatty-acid--CoA ligase (cerotic acid), cell envelope -1000 1000 0 -8.50035e-05 -r_2213 fatty-acid--CoA ligase (behenate), ER membrane 0 0 0 0 -r_2214 fatty-acid--CoA ligase (lignoceric acid), ER membrane -1000 1000 0 -4.72689e-12 -r_2215 fatty-acid--CoA ligase (cerotic acid), ER membrane -1000 1000 0 3.71614e-12 -r_2216 fatty-acid--CoA ligase (behenate), lipid particle 0 0 0 0 -r_2217 fatty-acid--CoA ligase (lignoceric acid), lipid particle -1000 1000 0 4.72689e-12 -r_2218 fatty-acid--CoA ligase (cerotic acid), lipid particle -1000 1000 0 -3.71614e-12 -r_2219 fatty acyl-CoA transport via ABC system (C12:0) 0 0.1089 0 0.000388549 -r_2220 fatty acyl-CoA transport via ABC system (C14:0) 0 0.1089 0 0.000645373 -r_2221 fatty acyl-CoA transport via ABC system (C16:0) 0 0.1089 0 0.00660504 -r_2222 fatty acyl-CoA transport via ABC system (C16:1) 0 0.1089 0 0.00671804 -r_2223 fatty acyl-CoA transport via ABC system (C18:0) 0 0.1089 0 0.005923 -r_2224 fatty acyl-CoA transport via ABC system (C18:1) 0 0.1089 0 0.00600996 -r_2225 fatty acyl-CoA transport via ABC system (C20:0) 0 0.0440043 0 0.00530899 -r_2226 fatty acyl-CoA transport via ABC system (C22:0) 0 0.027573 0 0.00399729 -r_2227 fatty acyl-CoA transport via ABC system (C24:0) 0 0.0200765 0 0.00266486 -r_2228 fatty acyl-CoA transport via ABC system (C26:0) 0 0.0157849 0 0.00199864 -r_2229 butyrate (n-C4:0) transport, cytoplasm-peroxisome -0.0102093 0 0 0 -r_2230 hexanoate (n-C6:0) transport, cytoplasm-peroxisome -0.0103734 0 0 0 -r_2231 octadecenoate (n-C18:1) transport, cytoplasm-peroxisome -0.1089 0.0198045 0 -0.004889 -r_2232 peroxisomal acyl-CoA thioesterase (4:0) 0 0.0102093 0 0.00524464 -r_2233 peroxisomal acyl-CoA thioesterase (6:0) 0 0.0103734 0 6.94622e-05 -r_2234 peroxisomal acyl-CoA thioesterase (16:1) 0 0.17424 0 0.00588476 -r_2235 peroxisomal acyl-CoA thioesterase (18:1) 0 0.17424 0 0.00532274 -r_2236 acyl-CoA oxidase (butanoyl-CoA) 0 0.0101792 0 0.00555469 -r_2237 acyl-CoA oxidase (hexanoyl-CoA) 0 0.0108321 0 0.00573448 -r_2238 acyl-CoA oxidase (octanoyl-CoA) 0 0.010918 0 0.00573448 -r_2239 acyl-CoA oxidase (icosanoyl-CoA) 0 0.0440043 0 0.00530899 -r_2240 acyl-CoA oxidase (docosanoyl-CoA) 0 0.027573 0 0.00399729 -r_2241 acyl-CoA oxidase (tetracosanoyl-CoA) 0 0.0200765 0 0.00266486 -r_2242 acyl-CoA oxidase (palmitoleoyl-CoA) 0 0.0106844 0 0.00573448 -r_2243 acyl-CoA oxidase (cis-tetradec-7-enoyl-CoA) 0 0.0106844 0 0.00573448 -r_2244 acyl-CoA oxidase (cis-dodec-5-enoyl-CoA) 0 0.0106844 0 0.00573448 -r_2245 acyl-CoA oxidase (oleoyl-CoA) 0 0.0198045 0 0.00528499 -r_2246 acyl-CoA oxidase (cis-hexadec-7-enoyl-CoA) 0 0.0198045 0 0.00528499 -r_2247 acyl-CoA oxidase (cis-tetradec-5-enoyl-CoA) 0 0.0198045 0 0.00528499 -r_2248 2-enoyl-CoA hydratase (3-hydroxydecanoyl-CoA) 0 0.0111585 0 0.00573448 -r_2249 2-enoyl-CoA hydratase (3-hydroxydodecanoyl-CoA) 0 0.0111585 0 0.00568599 -r_2250 2-enoyl-CoA hydratase (3-hydroxytetradecanoyl-CoA) 0 0.0738428 0 0.00597951 -r_2251 2-enoyl-CoA hydratase (3-hydroxyhexadecanoyl-CoA) 0 0.0738428 0 0.00612361 -r_2252 2-enoyl-CoA hydratase (3-hydroxyoctadecanoyl-CoA) 0 0.0738428 0 0.00585046 -r_2253 2-enoyl-CoA hydratase (3-hydroxyhexacosanoyl-CoA) 0 0.0157849 0 0.00199864 -r_2254 2-enoyl-CoA hydratase (3-hydroxybutanoyl-CoA) 0 0.0101792 0 0.00555469 -r_2255 2-enoyl-CoA hydratase (3-hydroxyhexanoyl-CoA) 0 0.0108321 0 0.00573448 -r_2256 2-enoyl-CoA hydratase (3-hydroxyoctanoyl-CoA) 0 0.010918 0 0.00573448 -r_2257 2-enoyl-CoA hydratase (3-hydroxyicosanoyl-CoA) 0 0.0440043 0 0.00530899 -r_2258 2-enoyl-CoA hydratase (3-hydroxydocosanoyl-CoA) 0 0.027573 0 0.00399729 -r_2259 2-enoyl-CoA hydratase (3-hydroxytetracosanoyl-CoA) 0 0.0200765 0 0.00266486 -r_2260 2-enoyl-CoA hydratase (3-hydroxy-cis-hexadec-9-enoyl-CoA) 0 0.0106844 0 0.00573448 -r_2261 2-enoyl-CoA hydratase (3-hydroxy-cis-tetradec-7-enoyl-CoA) 0 0.0106844 0 0.00573448 -r_2262 2-enoyl-CoA hydratase (3-hydroxy-cis-dodec-5-enoyl-CoA) 0 0.0106844 0 0.00573448 -r_2263 2-enoyl-CoA hydratase (3-hydroxy-cis-octadec-9-enoyl-CoA) 0 0.0198045 0 0.00528499 -r_2264 2-enoyl-CoA hydratase (3-hydroxy-cis-hexadec-7-enoyl-CoA) 0 0.0198045 0 0.00528499 -r_2265 2-enoyl-CoA hydratase (3-hydroxy-cis-tetradec-5-enoyl-CoA) 0 0.00943856 0 0.0050656 -r_2266 3-hydroxyacyl-CoA dehydrogenase (3-oxodecanoyl-CoA) 0 0.0111585 0 0.00573448 -r_2267 3-hydroxyacyl-CoA dehydrogenase (3-oxododecanoyl-CoA) 0 0.0111585 0 0.00568599 -r_2268 3-hydroxyacyl-CoA dehydrogenase (3-oxohexadecanoyl-CoA) 0 0.0738428 0 0.00612361 -r_2269 3-hydroxyacyl-CoA dehydrogenase (3-oxooctadecanoyl-CoA) 0 0.0738428 0 0.00585046 -r_2270 3-hydroxyacyl-CoA dehydrogenase (3-oxohexacosanoyl-CoA) 0 0.0157849 0 0.00199864 -r_2271 3-hydroxyacyl-CoA dehydrogenase (3-oxobutanoyl-CoA) 0 0.0101792 0 0.00555469 -r_2272 3-hydroxyacyl-CoA dehydrogenase (3-oxohexanoyl-CoA) 0 0.0108321 0 0.00573448 -r_2273 3-hydroxyacyl-CoA dehydrogenase (3-oxooctanoyl-CoA) 0 0.010918 0 0.00573448 -r_2274 3-hydroxyacyl-CoA dehydrogenase (3-oxoicosanoyl-CoA) 0 0.0440043 0 0.00530899 -r_2275 3-hydroxyacyl-CoA dehydrogenase (3-oxodocosanoyl-CoA) 0 0.027573 0 0.00399729 -r_2276 3-hydroxyacyl-CoA dehydrogenase (3-oxotetracosanoyl-CoA) 0 0.0200765 0 0.00266486 -r_2277 3-hydroxyacyl-CoA dehydrogenase (3-oxo-cis-hexadec-9-enoyl-CoA) 0 0.0106844 0 0.00573448 -r_2278 3-hydroxyacyl-CoA dehydrogenase (3-oxo-cis-tetradec-7-enoyl-CoA) 0 0.0106844 0 0.00573448 -r_2279 3-hydroxyacyl-CoA dehydrogenase (3-oxo-cis-dodec-5-enoyl-CoA) 0 0.0106844 0 0.00573448 -r_2280 3-hydroxyacyl-CoA dehydrogenase (3-oxo-cis-octadec-9-enoyl-CoA) 0 0.0198045 0 0.00528499 -r_2281 3-hydroxyacyl-CoA dehydrogenase (3-oxo-cis-hexadec-7-enoyl-CoA) 0 0.0198045 0 0.00528499 -r_2282 3-hydroxyacyl-CoA dehydrogenase (3-oxo-cis-tetradec-5-enoyl-CoA) 0 0.00943856 0 0.0050656 -r_2283 acetyl-CoA C-acyltransferase (acetyl-CoA) 0 0.0101792 0 0.00555469 -r_2284 acetyl-CoA C-acyltransferase (butanoyl-CoA) 0 0.0108321 0 0.00573448 -r_2285 acetyl-CoA C-acyltransferase (hexanoyl-CoA) 0 0.010918 0 0.00573448 -r_2286 acetyl-CoA C-acyltransferase (stearoyl-CoA) 0 0.0440043 0 0.00530899 -r_2287 acetyl-CoA C-acyltransferase (icosanoyl-CoA) 0 0.027573 0 0.00399729 -r_2288 acetyl-CoA C-acyltransferase (docosanoyl-CoA) 0 0.0200765 0 0.00266486 -r_2289 acetyl-CoA C-acyltransferase (cis-tetradec-7-enoyl-CoA) 0 0.0106844 0 0.00573448 -r_2290 acetyl-CoA C-acyltransferase (cis-dodec-5-enoyl-CoA) 0 0.0106844 0 0.00573448 -r_2291 acetyl-CoA C-acyltransferase (cis-dec-3-enoyl-CoA) 0 0.0106844 0 0.00573448 -r_2292 acetyl-CoA C-acyltransferase (cis-hexadec-7-enoyl-CoA) 0 0.0198045 0 0.00528499 -r_2293 acetyl-CoA C-acyltransferase (cis-tetradec-5-enoyl-CoA) 0 0.0198045 0 0.00528499 -r_2294 acetyl-CoA C-acyltransferase (cis-dodec-3-enoyl-CoA) 0 0.00943856 0 0.0050656 -r_2295 delta3,delta2-enoyl-CoA isomerase (cis-dec-3-enoyl-CoA) 0 0.0106844 0 0.00573448 -r_2296 delta3,delta2-enoyl-CoA isomerase (trans-2,cis-5-dodecadienoyl-CoA) 0 0.0101401 0 0.00399946 -r_2297 delta3,delta2-enoyl-CoA isomerase (trans-dodec-3-enoyl-CoA) 0 0.0101401 0 0.00399946 -r_2298 delta3,delta2-enoyl-CoA isomerase (cis-dodec-3-enoyl-CoA) 0 0.00943856 0 0.0050656 -r_2299 delta3,delta2-enoyl-CoA isomerase (trans-2,cis-5-tetradecadienoyl-CoA) 0 0.0198045 0 0.00399946 -r_2300 delta3,delta2-enoyl-CoA isomerase (trans-tetradec-3-enoyl-CoA) 0 0.0198045 0 0.00399946 -r_2301 delta(3,5)-delta(2,4)-dienoyl-CoA isomerase (trans-3,cis-5-dodecadienoyl-CoA) 0 0.0101401 0 0.00399946 -r_2302 delta(3,5)-delta(2,4)-dienoyl-CoA isomerase (trans-3,cis-5-tetradecadienoyl-CoA) 0 0.0198045 0 0.00399946 -r_2303 2,4-dienoyl-CoA reductase (trans-2,trans-4-dodecadienoyl-CoA) 0 0.0101401 0 0.00399946 -r_2304 2,4-dienoyl-CoA reductase (trans-2,trans-4-tetradecadienoyl-CoA) 0 0.0198045 0 0.00399946 -r_2305 cis-aconitate(3-) to isocitrate -1000 1000 -0.647898 -1.79467 -r_2308 glycerol-3-phosphate acyltransferase (16:0), ER membrane 0 0.0756824 0 0.00645819 -r_2309 glycerol-3-phosphate acyltransferase (16:1), ER membrane 0 0.0767949 0 0.0104787 -r_2310 glycerol-3-phosphate acyltransferase (18:0), ER membrane 0 0.0736085 0 0.00263414 -r_2311 glycerol-3-phosphate acyltransferase (18:1), ER membrane 0 0.0745341 0 0.00263414 -r_2312 dihydroxyacetone phosphate acyltransferase (16:0), ER membrane 0 0.0698606 0 0.00641563 -r_2313 dihydroxyacetone phosphate acyltransferase (16:1), ER membrane 0 0.0708876 0 0.00806137 -r_2314 dihydroxyacetone phosphate acyltransferase (18:0), ER membrane 0 0.0679463 0 0.00263414 -r_2315 dihydroxyacetone phosphate acyltransferase (18:1), ER membrane 0 0.0688007 0 0.00263414 -r_2316 glycerol-3-phosphate acyltransferase (16:0), lipid particle 0 0.0752789 0 0.00239221 -r_2317 glycerol-3-phosphate acyltransferase (16:1), lipid particle 0 0.0759071 0 0.00239221 -r_2318 glycerol-3-phosphate acyltransferase (18:0), lipid particle 0 0.0736085 0 0.00263414 -r_2319 glycerol-3-phosphate acyltransferase (18:1), lipid particle 0 0.0737432 0 0.00263414 -r_2320 dihydroxyacetone phosphate acyltransferase (16:0), lipid particle 0 0.0694882 0 0.00239221 -r_2321 dihydroxyacetone phosphate acyltransferase (16:1), lipid particle 0 0.0700681 0 0.00239221 -r_2322 dihydroxyacetone phosphate acyltransferase (18:0), lipid particle 0 0.0679463 0 0.00263414 -r_2323 dihydroxyacetone phosphate acyltransferase (18:1), lipid particle 0 0.0680706 0 0.00263414 -r_2324 acyl dhap reductase (16:0), ER membrane 0 0.0698606 0 0.00601281 -r_2325 acyl dhap reductase (16:1), ER membrane 0 0.0708876 0 0.00654763 -r_2326 acyl dhap reductase (18:0), ER membrane 0 0.0679463 0 0.00263414 -r_2327 acyl dhap reductase (18:1), ER membrane 0 0.0688007 0 0.00263414 -r_2328 acyl dhap reductase (16:0), lipid particle 0 0.0694882 0 0.00239221 -r_2329 acyl dhap reductase (16:1), lipid particle 0 0.0700681 0 0.00239221 -r_2330 acyl dhap reductase (18:0), lipid particle 0 0.0679463 0 0.00263414 -r_2331 acyl dhap reductase (18:1), lipid particle 0 0.0680706 0 0.00263414 -r_2332 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-16:0, 2-16:1), ER membrane 0 0.0756824 0 0.00605496 -r_2333 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-16:0, 2-18:1), ER membrane 0 0.0752789 0 0.0078567 -r_2334 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-16:1, 2-16:1), ER membrane 0 0.0767949 0 0.00659415 -r_2335 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-16:1, 2-18:1), ER membrane 0 0.0759071 0 0.00949712 -r_2336 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-18:0, 2-16:1), ER membrane 0 0.0736085 0 0.00263414 -r_2337 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-18:0, 2-18:1), ER membrane 0 0.0736085 0 0.00441963 -r_2338 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-18:1, 2-16:1), ER membrane 0 0.0745341 0 0.00263414 -r_2339 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-18:1, 2-18:1), ER membrane 0 0.0737432 0 0.0041579 -r_2340 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-16:0, 2-18:1), lipid particle 0 0.0752789 0 0.00664186 -r_2341 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-16:1, 2-18:1), lipid particle 0 0.0759071 0 0.00717663 -r_2342 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-18:0, 2-18:1), lipid particle 0 0.0736085 0 0.00786481 -r_2343 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-18:1, 2-18:1), lipid particle 0 0.0737432 0 0.0059379 -r_2344 PA phosphatase (1-16:0, 2-16:1), ER membrane 0 0.291125 0 0.108421 -r_2345 PA phosphatase (1-16:0, 2-18:1), ER membrane 0 0.290755 0 0.108051 -r_2346 PA phosphatase (1-16:1, 2-16:1), ER membrane 0 0.291152 0 0.108449 -r_2347 PA phosphatase (1-16:1, 2-18:1), ER membrane 0 0.290773 0 0.10807 -r_2348 PA phosphatase (1-18:0, 2-16:1), ER membrane 0 0.290801 0 0.108098 -r_2349 PA phosphatase (1-18:0, 2-18:1), ER membrane 0 0.290511 0 0.107807 -r_2350 PA phosphatase (1-18:1, 2-16:1), ER membrane 0 0.290773 0 0.10807 -r_2351 PA phosphatase (1-18:1, 2-18:1), ER membrane 0 0.290412 0 0.107708 -r_2352 PA phosphatase (1-16:0, 2-16:1), vacuolar membrane 0 0 0 0 -r_2353 PA phosphatase (1-16:0, 2-18:1), vacuolar membrane 0 0 0 0 -r_2354 PA phosphatase (1-16:1, 2-16:1), vacuolar membrane 0 0 0 0 -r_2355 PA phosphatase (1-16:1, 2-18:1), vacuolar membrane 0 0 0 0 -r_2356 PA phosphatase (1-18:0, 2-16:1), vacuolar membrane 0 0 0 0 -r_2357 PA phosphatase (1-18:0, 2-18:1), vacuolar membrane 0 0 0 0 -r_2358 PA phosphatase (1-18:1, 2-16:1), vacuolar membrane 0 0 0 0 -r_2359 PA phosphatase (1-18:1, 2-18:1), vacuolar membrane 0 0 0 0 -r_2360 PA phosphatase (1-16:0, 2-16:1), Golgi membrane 0 0.291125 0 0.108421 -r_2361 PA phosphatase (1-16:0, 2-18:1), Golgi membrane 0 0.290755 0 0.108051 -r_2362 PA phosphatase (1-16:1, 2-16:1), Golgi membrane 0 0.291152 0 0.108449 -r_2363 PA phosphatase (1-16:1, 2-18:1), Golgi membrane 0 0.290773 0 0.10807 -r_2364 PA phosphatase (1-18:0, 2-16:1), Golgi membrane 0 0.290801 0 0.108098 -r_2365 PA phosphatase (1-18:0, 2-18:1), Golgi membrane 0 0.290511 0 0.107807 -r_2366 PA phosphatase (1-18:1, 2-16:1), Golgi membrane 0 0.290773 0 0.10807 -r_2367 PA phosphatase (1-18:1, 2-18:1), Golgi membrane 0 0.290412 0 0.107708 -r_2368 diacylglycerol acyltransferase (1-16:0, 2-16:1, 3-16:0), ER membrane 0 0.174958 0 0.0125915 -r_2369 diacylglycerol acyltransferase (1-16:0, 2-18:1, 3-16:0), ER membrane 0 0.174727 0 0.00806984 -r_2370 diacylglycerol acyltransferase (1-16:1, 2-16:1, 3-16:0), ER membrane 0 0.174975 0 0.00742924 -r_2371 diacylglycerol acyltransferase (1-16:1, 2-18:1, 3-16:0), ER membrane 0 0.174743 0 0.00736291 -r_2372 diacylglycerol acyltransferase (1-18:0, 2-16:1, 3-16:0), ER membrane 0 0.174743 0 0.0125302 -r_2373 diacylglycerol acyltransferase (1-18:0, 2-18:1, 3-16:0), ER membrane 0 0.174432 0 0.0125066 -r_2374 diacylglycerol acyltransferase (1-18:1, 2-16:1, 3-16:0), ER membrane 0 0.174743 0 0.0125537 -r_2375 diacylglycerol acyltransferase (1-18:1, 2-18:1, 3-16:0), ER membrane 0 0.174455 0 0.00729505 -r_2376 diacylglycerol acyltransferase (1-16:0, 2-16:1, 3-16:1), ER membrane 0 0.174993 0 0.0126857 -r_2377 diacylglycerol acyltransferase (1-16:0, 2-18:1, 3-16:1), ER membrane 0 0.174993 0 0.0110046 -r_2378 diacylglycerol acyltransferase (1-16:1, 2-16:1, 3-16:1), ER membrane 0 0.174993 0 0.0134387 -r_2379 diacylglycerol acyltransferase (1-16:1, 2-18:1, 3-16:1), ER membrane 0 0.174993 0 0.0126857 -r_2380 diacylglycerol acyltransferase (1-18:0, 2-16:1, 3-16:1), ER membrane 0 0.174993 0 0.0126857 -r_2381 diacylglycerol acyltransferase (1-18:0, 2-18:1, 3-16:1), ER membrane 0 0.174993 0 0.0108791 -r_2382 diacylglycerol acyltransferase (1-18:1, 2-16:1, 3-16:1), ER membrane 0 0.174993 0 0.0126857 -r_2383 diacylglycerol acyltransferase (1-18:1, 2-18:1, 3-16:1), ER membrane 0 0.174993 0 0.0126857 -r_2384 diacylglycerol acyltransferase (1-16:0, 2-16:1, 3-18:0), ER membrane 0 0.174743 0 0.0110295 -r_2385 diacylglycerol acyltransferase (1-16:0, 2-18:1, 3-18:0), ER membrane 0 0.174432 0 0.0110166 -r_2386 diacylglycerol acyltransferase (1-16:1, 2-16:1, 3-18:0), ER membrane 0 0.174761 0 0.0110309 -r_2387 diacylglycerol acyltransferase (1-16:1, 2-18:1, 3-18:0), ER membrane 0 0.174445 0 0.0110172 -r_2388 diacylglycerol acyltransferase (1-18:0, 2-16:1, 3-18:0), ER membrane 0 0.174411 0 0.0108185 -r_2389 diacylglycerol acyltransferase (1-18:0, 2-18:1, 3-18:0), ER membrane 0 0.174332 0 0.0108122 -r_2390 diacylglycerol acyltransferase (1-18:1, 2-16:1, 3-18:0), ER membrane 0 0.174445 0 0.0110172 -r_2391 diacylglycerol acyltransferase (1-18:1, 2-18:1, 3-18:0), ER membrane 0 0.174315 0 0.0109744 -r_2392 diacylglycerol acyltransferase (1-16:0, 2-16:1, 3-18:1), ER membrane 0 0.174993 0 0.0115779 -r_2393 diacylglycerol acyltransferase (1-16:0, 2-18:1, 3-18:1), ER membrane 0 0.174993 0 0.0115779 -r_2394 diacylglycerol acyltransferase (1-16:1, 2-16:1, 3-18:1), ER membrane 0 0.174993 0 0.0115779 -r_2395 diacylglycerol acyltransferase (1-16:1, 2-18:1, 3-18:1), ER membrane 0 0.174993 0 0.0115779 -r_2396 diacylglycerol acyltransferase (1-18:0, 2-16:1, 3-18:1), ER membrane 0 0.174993 0 0.0115779 -r_2397 diacylglycerol acyltransferase (1-18:0, 2-18:1, 3-18:1), ER membrane 0 0.174993 0 0.0115779 -r_2398 diacylglycerol acyltransferase (1-18:1, 2-16:1, 3-18:1), ER membrane 0 0.174993 0 0.0115779 -r_2399 diacylglycerol acyltransferase (1-18:1, 2-18:1, 3-18:1), ER membrane 0 0.174993 0 0.0115779 -r_2400 diacylglycerol acyltransferase (1-16:0, 2-16:1, 3-16:0), lipid particle 0 0.174958 0 0.00666925 -r_2401 diacylglycerol acyltransferase (1-16:0, 2-18:1, 3-16:0), lipid particle 0 0.174727 0 0.00662866 -r_2402 diacylglycerol acyltransferase (1-16:1, 2-16:1, 3-16:0), lipid particle 0 0.174975 0 0.00667228 -r_2403 diacylglycerol acyltransferase (1-16:1, 2-18:1, 3-16:0), lipid particle 0 0.174743 0 0.00663149 -r_2404 diacylglycerol acyltransferase (1-18:0, 2-16:1, 3-16:0), lipid particle 0 0.174743 0 0.00660798 -r_2405 diacylglycerol acyltransferase (1-18:0, 2-18:1, 3-16:0), lipid particle 0 0.174432 0 0.00658431 -r_2406 diacylglycerol acyltransferase (1-18:1, 2-16:1, 3-16:0), lipid particle 0 0.174743 0 0.00663149 -r_2407 diacylglycerol acyltransferase (1-18:1, 2-18:1, 3-16:0), lipid particle 0 0.174455 0 0.0065875 -r_2408 diacylglycerol acyltransferase (1-16:0, 2-16:1, 3-16:1), lipid particle 0 0.174993 0 0.00671937 -r_2409 diacylglycerol acyltransferase (1-16:0, 2-18:1, 3-16:1), lipid particle 0 0.174993 0 0.00671937 -r_2410 diacylglycerol acyltransferase (1-16:1, 2-16:1, 3-16:1), lipid particle 0 0.174993 0 0.00671937 -r_2411 diacylglycerol acyltransferase (1-16:1, 2-18:1, 3-16:1), lipid particle 0 0.174993 0 0.00671937 -r_2412 diacylglycerol acyltransferase (1-18:0, 2-16:1, 3-16:1), lipid particle 0 0.174993 0 0.00671937 -r_2413 diacylglycerol acyltransferase (1-18:0, 2-18:1, 3-16:1), lipid particle 0 0.174993 0 0.00671937 -r_2414 diacylglycerol acyltransferase (1-18:1, 2-16:1, 3-16:1), lipid particle 0 0.174993 0 0.00671937 -r_2415 diacylglycerol acyltransferase (1-18:1, 2-18:1, 3-16:1), lipid particle 0 0.174993 0 0.00671937 -r_2416 diacylglycerol acyltransferase (1-16:0, 2-16:1, 3-18:0), lipid particle 0 0.174743 0 0.00570893 -r_2417 diacylglycerol acyltransferase (1-16:0, 2-18:1, 3-18:0), lipid particle 0 0.174432 0 0.00569597 -r_2418 diacylglycerol acyltransferase (1-16:1, 2-16:1, 3-18:0), lipid particle 0 0.174761 0 0.00571034 -r_2419 diacylglycerol acyltransferase (1-16:1, 2-18:1, 3-18:0), lipid particle 0 0.174445 0 0.00569656 -r_2420 diacylglycerol acyltransferase (1-18:0, 2-16:1, 3-18:0), lipid particle 0 0.174411 0 0.00549791 -r_2421 diacylglycerol acyltransferase (1-18:0, 2-18:1, 3-18:0), lipid particle 0 0.174332 0 0.00549163 -r_2422 diacylglycerol acyltransferase (1-18:1, 2-16:1, 3-18:0), lipid particle 0 0.174445 0 0.00569656 -r_2423 diacylglycerol acyltransferase (1-18:1, 2-18:1, 3-18:0), lipid particle 0 0.174315 0 0.00565383 -r_2424 diacylglycerol acyltransferase (1-16:0, 2-16:1, 3-18:1), lipid particle 0 0.174993 0 0.00622707 -r_2425 diacylglycerol acyltransferase (1-16:0, 2-18:1, 3-18:1), lipid particle 0 0.174993 0 0.00622707 -r_2426 diacylglycerol acyltransferase (1-16:1, 2-16:1, 3-18:1), lipid particle 0 0.174993 0 0.00622707 -r_2427 diacylglycerol acyltransferase (1-16:1, 2-18:1, 3-18:1), lipid particle 0 0.174993 0 0.00622707 -r_2428 diacylglycerol acyltransferase (1-18:0, 2-16:1, 3-18:1), lipid particle 0 0.174993 0 0.00622707 -r_2429 diacylglycerol acyltransferase (1-18:0, 2-18:1, 3-18:1), lipid particle 0 0.174993 0 0.00622707 -r_2430 diacylglycerol acyltransferase (1-18:1, 2-16:1, 3-18:1), lipid particle 0 0.174993 0 0.00622707 -r_2431 diacylglycerol acyltransferase (1-18:1, 2-18:1, 3-18:1), lipid particle 0 0.174993 0 0.00622707 -r_2432 CDP-diacylglycerol synthase (1-16:0, 2-16:1), ER membrane 0 0.111675 0 0.00624292 -r_2433 CDP-diacylglycerol synthase (1-16:1, 2-16:1), ER membrane 0 0.112708 0 0.00624751 -r_2434 CDP-diacylglycerol synthase (1-18:0, 2-16:1), ER membrane 0 0.109601 0 0.00378586 -r_2435 CDP-diacylglycerol synthase (1-18:1, 2-16:1), ER membrane 0 0.110436 0 0.00463152 -r_2436 CDP-diacylglycerol synthase (1-16:0, 2-18:1), ER membrane 0 0.111069 0 0.00464665 -r_2437 CDP-diacylglycerol synthase (1-16:1, 2-18:1), ER membrane -2.18279e-11 0.11145 0 0.00622089 -r_2438 CDP-diacylglycerol synthase (1-18:0, 2-18:1), ER membrane 0 0.109601 0 0.00463985 -r_2439 CDP-diacylglycerol synthase (1-18:1, 2-18:1), ER membrane 0 0.10967 0 0.00553985 -r_2440 CDP-diacylglycerol synthase (1-16:0, 2-16:1), mitochondrial membrane 0 0.0793977 0 0.0147833 -r_2441 CDP-diacylglycerol synthase (1-16:1, 2-16:1), mitochondrial membrane 0 0.0794052 0 0.0147923 -r_2442 CDP-diacylglycerol synthase (1-18:0, 2-16:1), mitochondrial membrane 0 0.0793094 0 0 -r_2443 CDP-diacylglycerol synthase (1-18:1, 2-16:1), mitochondrial membrane 0 0.0793018 0 0 -r_2444 CDP-diacylglycerol synthase (1-16:0, 2-18:1), mitochondrial membrane 0 0.0792968 0 0.0147149 -r_2445 CDP-diacylglycerol synthase (1-16:1, 2-18:1), mitochondrial membrane 0 0.0793018 0 0 -r_2446 PS synthase (1-16:0, 2-16:1), ER membrane 0 0.0200561 0 0.00472039 -r_2447 PS synthase (1-16:1, 2-16:1), ER membrane 0 0.0201426 0 0.00472498 -r_2448 PS synthase (1-18:0, 2-16:1), ER membrane 0 0.019078 0 0.00382023 -r_2449 PS synthase (1-18:1, 2-16:1), ER membrane 0 0.0199219 0 0.00466337 -r_2450 PS synthase (1-16:0, 2-18:1), ER membrane 0 0.0199782 0 0.00469392 -r_2451 PS synthase (1-16:1, 2-18:1), ER membrane -2.18279e-11 0.0200128 0 0.00469836 -r_2452 PS synthase (1-18:0, 2-18:1), ER membrane 0 0.0190761 0 0.00382023 -r_2453 PS synthase (1-18:1, 2-18:1), ER membrane 0 0.0196568 0 0.00463091 -r_2454 PI synthase (1-16:0, 2-16:1), ER membrane 0 0.109916 0 0.00152253 -r_2455 PI synthase (1-16:1, 2-16:1), ER membrane 0 0.109936 0 0.00152253 -r_2456 PI synthase (1-18:0, 2-16:1), ER membrane 0 0.109579 0 0.00149788 -r_2457 PI synthase (1-18:1, 2-16:1), ER membrane 0 0.109663 0 0.00152253 -r_2458 PI synthase (1-16:0, 2-18:1), ER membrane 0 0.109645 0 0.00152253 -r_2459 PI synthase (1-16:1, 2-18:1), ER membrane 0 0.109663 0 0.00152253 -r_2460 PI synthase (1-18:0, 2-18:1), ER membrane 0 0.109443 0 0.00152067 -r_2461 PI synthase (1-18:1, 2-18:1), ER membrane 0 0.109401 0 0.00152253 -r_2462 lysoPI acyltransferase (1-18:0, 2-16:1), ER membrane 0 0 0 0 -r_2463 lysoPI acyltransferase (1-18:0, 2-18:1), ER membrane 0 0 0 0 -r_2464 PS decarboxylase (1-16:0, 2-16:1), mitochondrial membrane 0 0.0194057 0 0.00400298 -r_2465 PS decarboxylase (1-16:1, 2-16:1), mitochondrial membrane 0 0.01949 0 0.00400557 -r_2466 PS decarboxylase (1-18:0, 2-16:1), mitochondrial membrane 0 0.019078 0 0.00382023 -r_2467 PS decarboxylase (1-18:1, 2-16:1), mitochondrial membrane 0 0.0192519 0 0.00397084 -r_2468 PS decarboxylase (1-16:0, 2-18:1), mitochondrial membrane 0 0.0193389 0 0.00400298 -r_2469 PS decarboxylase (1-16:1, 2-18:1), mitochondrial membrane -2.18279e-11 0.0193724 0 0.00400557 -r_2470 PS decarboxylase (1-18:0, 2-18:1), mitochondrial membrane 0 0.0190756 0 0.00382023 -r_2471 PS decarboxylase (1-18:1, 2-18:1), mitochondrial membrane 0 0.0192175 0 0.00397084 -r_2472 PS decarboxylase (1-16:0, 2-16:1), Golgi membrane 0 0.0194057 0 0.00400298 -r_2473 PS decarboxylase (1-16:1, 2-16:1), Golgi membrane 0 0.01949 0 0.00400557 -r_2474 PS decarboxylase (1-18:0, 2-16:1), Golgi membrane 0 0.019078 0 0.00382023 -r_2475 PS decarboxylase (1-18:1, 2-16:1), Golgi membrane 0 0.0192519 0 0.00397084 -r_2476 PS decarboxylase (1-16:0, 2-18:1), Golgi membrane 0 0.0193389 0 0.00400298 -r_2477 PS decarboxylase (1-16:1, 2-18:1), Golgi membrane 0 0.0193724 0 0.00400557 -r_2478 PS decarboxylase (1-18:0, 2-18:1), Golgi membrane 0 0.0190756 0 0.00382023 -r_2479 PS decarboxylase (1-18:1, 2-18:1), Golgi membrane 0 0.0192175 0 0.00397084 -r_2480 PS decarboxylase (1-16:0, 2-16:1), vacuolar membrane 0 0.0194057 0 0.00400298 -r_2481 PS decarboxylase (1-16:1, 2-16:1), vacuolar membrane 0 0.01949 0 0.00400557 -r_2482 PS decarboxylase (1-18:0, 2-16:1), vacuolar membrane 0 0.019078 0 0.00382023 -r_2483 PS decarboxylase (1-18:1, 2-16:1), vacuolar membrane 0 0.0192519 0 0.00397084 -r_2484 PS decarboxylase (1-16:0, 2-18:1), vacuolar membrane 0 0.0193389 0 0.00400298 -r_2485 PS decarboxylase (1-16:1, 2-18:1), vacuolar membrane 0 0.0193724 0 0.00400557 -r_2486 PS decarboxylase (1-18:0, 2-18:1), vacuolar membrane 0 0.0190756 0 0.00382023 -r_2487 PS decarboxylase (1-18:1, 2-18:1), vacuolar membrane 0 0.0192175 0 0.00397084 -r_2488 PE methyltransferase (1-16:0, 2-16:1), ER membrane 0 0.0185947 0 0.00623837 -r_2489 PE methyltransferase (1-16:1, 2-16:1), ER membrane 0 0.0186233 0 0.00623837 -r_2490 PE methyltransferase (1-18:0, 2-16:1), ER membrane 0 0.0183977 0 0.00623837 -r_2491 PE methyltransferase (1-18:1, 2-16:1), ER membrane 0 0.0184087 0 0.00623837 -r_2492 PE methyltransferase (1-16:0, 2-18:1), ER membrane 0 0.0185947 0 0.00590176 -r_2493 PE methyltransferase (1-16:1, 2-18:1), ER membrane 0 0.0186233 0 0.00623837 -r_2494 PE methyltransferase (1-18:0, 2-18:1), ER membrane 0 0.0183977 0 0.00623004 -r_2495 PE methyltransferase (1-18:1, 2-18:1), ER membrane 0 0.0184087 0 0.00623837 -r_2496 phosphatidyl-N-methylethanolamine methyltransferase (1-16:0, 2-16:1), ER membrane 0 0.0185947 0 0.00311918 -r_2497 phosphatidyl-N-methylethanolamine methyltransferase (1-16:1, 2-16:1), ER membrane 0 0.0186233 0 0.00311918 -r_2498 phosphatidyl-N-methylethanolamine methyltransferase (1-18:0, 2-16:1), ER membrane 0 0.0183977 0 0.00311918 -r_2499 phosphatidyl-N-methylethanolamine methyltransferase (1-18:1, 2-16:1), ER membrane 0 0.0184087 0 0.00311918 -r_2500 phosphatidyl-N-methylethanolamine methyltransferase (1-16:0, 2-18:1), ER membrane 0 0.0185947 0 0.00311918 -r_2501 phosphatidyl-N-methylethanolamine methyltransferase (1-16:1, 2-18:1), ER membrane 0 0.0186233 0 0.00311918 -r_2502 phosphatidyl-N-methylethanolamine methyltransferase (1-18:0, 2-18:1), ER membrane 0 0.0183977 0 0.00311918 -r_2503 phosphatidyl-N-methylethanolamine methyltransferase (1-18:1, 2-18:1), ER membrane 0 0.0184087 0 0.00311918 -r_2504 phosphatidyl-N,N-dimethylethanolamine methyltransferase (1-16:0, 2-16:1), ER membrane 0 0.0185947 0 0.00311918 -r_2505 phosphatidyl-N,N-dimethylethanolamine methyltransferase (1-16:1, 2-16:1), ER membrane 0 0.0186233 0 0.00311918 -r_2506 phosphatidyl-N,N-dimethylethanolamine methyltransferase (1-18:0, 2-16:1), ER membrane 0 0.0183977 0 0.00311918 -r_2507 phosphatidyl-N,N-dimethylethanolamine methyltransferase (1-18:1, 2-16:1), ER membrane 0 0.0184087 0 0.00311918 -r_2508 phosphatidyl-N,N-dimethylethanolamine methyltransferase (1-16:0, 2-18:1), ER membrane 0 0.0185947 0 0.00311918 -r_2509 phosphatidyl-N,N-dimethylethanolamine methyltransferase (1-16:1, 2-18:1), ER membrane 0 0.0186233 0 0.00311918 -r_2510 phosphatidyl-N,N-dimethylethanolamine methyltransferase (1-18:0, 2-18:1), ER membrane 0 0.0183977 0 0.00311918 -r_2511 phosphatidyl-N,N-dimethylethanolamine methyltransferase (1-18:1, 2-18:1), ER membrane 0 0.0184087 0 0.00311918 -r_2512 DAG kinase (1-16:0, 2-16:1), ER membrane 0 0.290399 0 0.107696 -r_2513 DAG kinase (1-16:1, 2-16:1), ER membrane 0 0.290399 0 0.107696 -r_2514 DAG kinase (1-18:0, 2-16:1), ER membrane 0 0.290399 0 0.107696 -r_2515 DAG kinase (1-18:1, 2-16:1), ER membrane 0 0.290399 0 0.107696 -r_2516 DAG kinase (1-16:0, 2-18:1), ER membrane 0 0.290399 0 0.107696 -r_2517 DAG kinase (1-16:1, 2-18:1), ER membrane -2.18279e-11 0.290399 0 0.107696 -r_2518 DAG kinase (1-18:0, 2-18:1), ER membrane 0 0.290399 0 0.107696 -r_2519 DAG kinase (1-18:1, 2-18:1), ER membrane 0 0.290399 0 0.107696 -r_2520 ethanolaminephosphotransferase (1-16:0, 2-16:1), ER membrane 0 0 0 0 -r_2521 ethanolaminephosphotransferase (1-16:1, 2-16:1), ER membrane 0 0 0 0 -r_2522 ethanolaminephosphotransferase (1-18:0, 2-16:1), ER membrane 0 0 0 0 -r_2523 ethanolaminephosphotransferase (1-18:1, 2-16:1), ER membrane 0 0 0 0 -r_2524 ethanolaminephosphotransferase (1-16:0, 2-18:1), ER membrane 0 0 0 0 -r_2525 ethanolaminephosphotransferase (1-16:1, 2-18:1), ER membrane 0 0 0 0 -r_2526 ethanolaminephosphotransferase (1-18:0, 2-18:1), ER membrane 0 0 0 0 -r_2527 ethanolaminephosphotransferase (1-18:1, 2-18:1), ER membrane 0 0 0 0 -r_2528 cholinephosphotransferase (1-16:0, 2-16:1), ER membrane 0 0.1089 0 0.00412868 -r_2529 cholinephosphotransferase (1-16:1, 2-16:1), ER membrane 0 0.1089 0 0.00412868 -r_2530 cholinephosphotransferase (1-18:0, 2-16:1), ER membrane 0 0.1089 0 0.00412868 -r_2531 cholinephosphotransferase (1-18:1, 2-16:1), ER membrane 0 0.1089 0 0.00412868 -r_2532 cholinephosphotransferase (1-16:0, 2-18:1), ER membrane 0 0.1089 0 0.00412868 -r_2533 cholinephosphotransferase (1-16:1, 2-18:1), ER membrane 0 0.1089 0 0.005046 -r_2534 cholinephosphotransferase (1-18:0, 2-18:1), ER membrane 0 0.1089 0 0.00412868 -r_2535 cholinephosphotransferase (1-18:1, 2-18:1), ER membrane 0 0.1089 0 0.00412868 -r_2536 phosphatidylglycerolphosphate synthase (1-16:0, 2-16:1), mitochondrial membrane 0 0.0793977 0 0.0295694 -r_2537 phosphatidylglycerolphosphate synthase (1-16:1, 2-16:1), mitochondrial membrane 0 0.0794052 0 0.0295769 -r_2538 phosphatidylglycerolphosphate synthase (1-18:0, 2-16:1), mitochondrial membrane 0 0.0793094 0 0.0294811 -r_2539 phosphatidylglycerolphosphate synthase (1-18:1, 2-16:1), mitochondrial membrane 0 0.0793018 0 0.0294736 -r_2540 phosphatidylglycerolphosphate synthase (1-16:0, 2-18:1), mitochondrial membrane 0 0.0792968 0 0.0294686 -r_2541 phosphatidylglycerolphosphate synthase (1-16:1, 2-18:1), mitochondrial membrane 0 0.0793018 0 0.0294736 -r_2542 PGP phosphatase (1-16:0, 2-16:1), mitochondrial membrane 0 0.0793977 0 0.0295694 -r_2543 PGP phosphatase (1-16:1, 2-16:1), mitochondrial membrane 0 0.0794052 0 0.0295769 -r_2544 PGP phosphatase (1-18:0, 2-16:1), mitochondrial membrane 0 0.0793094 0 0.0294811 -r_2545 PGP phosphatase (1-18:1, 2-16:1), mitochondrial membrane 0 0.0793018 0 0.0294736 -r_2546 PGP phosphatase (1-16:0, 2-18:1), mitochondrial membrane 0 0.0792968 0 0.0294686 -r_2547 PGP phosphatase (1-16:1, 2-18:1), mitochondrial membrane 0 0.0793018 0 0.0294736 -r_2548 CL synthase (1-16:0, 2-16:1, 3-16:0, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2549 CL synthase (1-16:0, 2-16:1, 3-16:1, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2550 CL synthase (1-16:0, 2-16:1, 3-18:0, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2551 CL synthase (1-16:0, 2-16:1, 3-18:1, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2552 CL synthase (1-16:0, 2-16:1, 3-16:0, 4-18:1), mitochondrial membrane 0 0 0 0 -r_2553 CL synthase (1-16:0, 2-16:1, 3-16:1, 4-18:1), mitochondrial membrane 0 0 0 0 -r_2554 CL synthase (1-16:1, 2-16:1, 3-16:0, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2555 CL synthase (1-16:1, 2-16:1, 3-16:1, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2556 CL synthase (1-16:1, 2-16:1, 3-18:0, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2557 CL synthase (1-16:1, 2-16:1, 3-18:1, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2558 CL synthase (1-16:1, 2-16:1, 3-16:0, 4-18:1), mitochondrial membrane 0 0 0 0 -r_2559 CL synthase (1-16:1, 2-16:1, 3-16:1, 4-18:1), mitochondrial membrane 0 0 0 0 -r_2560 CL synthase (1-18:0, 2-16:1, 3-16:0, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2561 CL synthase (1-18:0, 2-16:1, 3-16:1, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2562 CL synthase (1-18:0, 2-16:1, 3-18:0, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2563 CL synthase (1-18:0, 2-16:1, 3-18:1, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2564 CL synthase (1-18:0, 2-16:1, 3-16:0, 4-18:1), mitochondrial membrane 0 0 0 0 -r_2565 CL synthase (1-18:0, 2-16:1, 3-16:1, 4-18:1), mitochondrial membrane 0 0 0 0 -r_2566 CL synthase (1-18:1, 2-16:1, 3-16:0, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2567 CL synthase (1-18:1, 2-16:1, 3-16:1, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2568 CL synthase (1-18:1, 2-16:1, 3-18:0, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2569 CL synthase (1-18:1, 2-16:1, 3-18:1, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2570 CL synthase (1-18:1, 2-16:1, 3-16:0, 4-18:1), mitochondrial membrane 0 0 0 0 -r_2571 CL synthase (1-18:1, 2-16:1, 3-16:1, 4-18:1), mitochondrial membrane 0 0 0 0 -r_2572 CL synthase (1-16:0, 2-18:1, 3-16:0, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2573 CL synthase (1-16:0, 2-18:1, 3-16:1, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2574 CL synthase (1-16:0, 2-18:1, 3-18:0, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2575 CL synthase (1-16:0, 2-18:1, 3-18:1, 4-16:1), mitochondrial membrane 0 4.88853e-12 0 0 -r_2576 CL synthase (1-16:0, 2-18:1, 3-16:0, 4-18:1), mitochondrial membrane 0 0 0 0 -r_2577 CL synthase (1-16:0, 2-18:1, 3-16:1, 4-18:1), mitochondrial membrane 0 0 0 0 -r_2578 CL synthase (1-16:1, 2-18:1, 3-16:0, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2579 CL synthase (1-16:1, 2-18:1, 3-16:1, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2580 CL synthase (1-16:1, 2-18:1, 3-18:0, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2581 CL synthase (1-16:1, 2-18:1, 3-18:1, 4-16:1), mitochondrial membrane 0 0 0 0 -r_2582 CL synthase (1-16:1, 2-18:1, 3-16:0, 4-18:1), mitochondrial membrane 0 0 0 0 -r_2583 CL synthase (1-16:1, 2-18:1, 3-16:1, 4-18:1), mitochondrial membrane 0 0 0 0 -r_2584 CL (1-16:0, 2-16:1, 3-16:0, 4-16:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2585 CL (1-16:0, 2-16:1, 3-16:1, 4-16:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2586 CL (1-16:0, 2-16:1, 3-18:0, 4-16:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2587 CL (1-16:0, 2-16:1, 3-18:1, 4-16:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2588 CL (1-16:0, 2-16:1, 3-16:0, 4-18:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2589 CL (1-16:0, 2-16:1, 3-16:1, 4-18:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2590 CL (1-18:0, 2-16:1, 3-16:0, 4-16:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2591 CL (1-18:0, 2-16:1, 3-16:1, 4-16:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2592 CL (1-18:0, 2-16:1, 3-18:0, 4-16:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2593 CL (1-18:0, 2-16:1, 3-18:1, 4-16:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2594 CL (1-18:0, 2-16:1, 3-16:0, 4-18:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2595 CL (1-18:0, 2-16:1, 3-16:1, 4-18:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2596 CL (1-16:0, 2-18:1, 3-16:0, 4-16:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2597 CL (1-16:0, 2-18:1, 3-16:1, 4-16:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2598 CL (1-16:0, 2-18:1, 3-18:0, 4-16:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2599 CL (1-16:0, 2-18:1, 3-18:1, 4-16:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2600 CL (1-16:0, 2-18:1, 3-16:0, 4-18:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2601 CL (1-16:0, 2-18:1, 3-16:1, 4-18:1) phospholipase (1-position), mitochondrial membrane 0 0 0 0 -r_2602 CL (1-16:0, 2-16:1, 3-16:0, 4-16:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2603 CL (1-16:0, 2-16:1, 3-18:0, 4-16:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2604 CL (1-16:0, 2-16:1, 3-16:0, 4-18:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2605 CL (1-16:1, 2-16:1, 3-16:0, 4-16:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2606 CL (1-16:1, 2-16:1, 3-18:0, 4-16:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2607 CL (1-16:1, 2-16:1, 3-16:0, 4-18:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2608 CL (1-18:0, 2-16:1, 3-16:0, 4-16:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2609 CL (1-18:0, 2-16:1, 3-18:0, 4-16:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2610 CL (1-18:0, 2-16:1, 3-16:0, 4-18:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2611 CL (1-18:1, 2-16:1, 3-16:0, 4-16:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2612 CL (1-18:1, 2-16:1, 3-18:0, 4-16:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2613 CL (1-18:1, 2-16:1, 3-16:0, 4-18:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2614 CL (1-16:0, 2-18:1, 3-16:0, 4-16:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2615 CL (1-16:0, 2-18:1, 3-18:0, 4-16:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2616 CL (1-16:0, 2-18:1, 3-16:0, 4-18:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2617 CL (1-16:1, 2-18:1, 3-16:0, 4-16:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2618 CL (1-16:1, 2-18:1, 3-18:0, 4-16:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2619 CL (1-16:1, 2-18:1, 3-16:0, 4-18:1) phospholipase (3-position), mitochondrial membrane 0 0 0 0 -r_2620 MLCL (2-16:1, 3-16:0, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 3.98988e-11 -r_2621 MLCL (2-16:1, 3-16:0, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -3.87939e-11 -r_2622 MLCL (2-16:1, 3-16:0, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -3.46176e-11 -r_2623 MLCL (2-16:1, 3-16:0, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -3.98988e-11 -r_2624 MLCL (2-16:1, 3-16:0, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 6.42562e-11 -r_2625 MLCL (2-16:1, 3-16:0, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -5.9174e-11 -r_2626 MLCL (2-16:1, 3-16:0, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -6.42562e-11 -r_2627 MLCL (2-16:1, 3-16:0, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.50679e-11 -r_2628 MLCL (2-16:1, 3-16:1, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.09006e-11 -r_2629 MLCL (2-16:1, 3-16:1, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.85506e-05 -r_2630 MLCL (2-16:1, 3-16:1, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -2.32987e-11 -r_2631 MLCL (2-16:1, 3-16:1, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 6.41993e-11 -r_2632 MLCL (2-16:1, 3-16:1, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 8.84344e-06 -r_2633 MLCL (2-16:1, 3-16:1, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 8.84344e-06 -r_2634 MLCL (2-16:1, 3-16:1, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2786 -r_2635 MLCL (2-16:1, 3-16:1, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2782 -r_2636 MLCL (2-16:1, 3-18:0, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -2.09912e-11 -r_2637 MLCL (2-16:1, 3-18:0, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 2.15579e-11 -r_2638 MLCL (2-16:1, 3-18:0, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.278 -r_2639 MLCL (2-16:1, 3-18:0, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 2.09912e-11 -r_2640 MLCL (2-16:1, 3-18:0, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 7.1374e-12 -r_2641 MLCL (2-16:1, 3-18:0, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -1.42464e-12 -r_2642 MLCL (2-16:1, 3-18:0, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2785 -r_2643 MLCL (2-16:1, 3-18:0, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -1.26956e-11 -r_2644 MLCL (2-16:1, 3-18:1, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -3.49054e-12 -r_2645 MLCL (2-16:1, 3-18:1, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.85507e-05 -r_2646 MLCL (2-16:1, 3-18:1, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -2.37073e-11 -r_2647 MLCL (2-16:1, 3-18:1, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 4.08651e-11 -r_2648 MLCL (2-16:1, 3-18:1, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 8.84339e-06 -r_2649 MLCL (2-16:1, 3-18:1, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 4.27054e-11 -r_2650 MLCL (2-16:1, 3-18:1, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 9.70722e-06 -r_2651 MLCL (2-16:1, 3-18:1, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.58327e-11 -r_2652 MLCL (2-16:1, 3-16:0, 4-18:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -1.75184e-11 -r_2653 MLCL (2-16:1, 3-16:0, 4-18:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 7.42025e-05 -r_2654 MLCL (2-16:1, 3-16:0, 4-18:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 2.06928e-11 -r_2655 MLCL (2-16:1, 3-16:0, 4-18:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.75184e-11 -r_2656 MLCL (2-16:1, 3-16:0, 4-18:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -2.28777e-11 -r_2657 MLCL (2-16:1, 3-16:0, 4-18:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 3.4639e-12 -r_2658 MLCL (2-16:1, 3-16:0, 4-18:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2785 -r_2659 MLCL (2-16:1, 3-16:0, 4-18:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 0 -r_2660 MLCL (2-16:1, 3-16:1, 4-18:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.83675e-11 -r_2661 MLCL (2-16:1, 3-16:1, 4-18:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -1.83675e-11 -r_2662 MLCL (2-16:1, 3-16:1, 4-18:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.92939e-12 -r_2663 MLCL (2-16:1, 3-16:1, 4-18:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -2.56772e-11 -r_2664 MLCL (2-16:1, 3-16:1, 4-18:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 6.53344e-12 -r_2665 MLCL (2-16:1, 3-16:1, 4-18:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -6.53344e-12 -r_2666 MLCL (2-16:1, 3-16:1, 4-18:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.279 -r_2667 MLCL (2-16:1, 3-16:1, 4-18:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 5.05356e-11 -r_2668 MLCL (2-18:1, 3-16:0, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -5.79981e-11 -r_2669 MLCL (2-18:1, 3-16:0, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2779 -r_2670 MLCL (2-18:1, 3-16:0, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.277 -r_2671 MLCL (2-18:1, 3-16:0, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 3.38929e-11 -r_2672 MLCL (2-18:1, 3-16:0, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -1.13296e-11 -r_2673 MLCL (2-18:1, 3-16:0, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -5.98881e-11 -r_2674 MLCL (2-18:1, 3-16:0, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2785 -r_2675 MLCL (2-18:1, 3-16:0, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.6958e-11 -r_2676 MLCL (2-18:1, 3-16:1, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.40208e-11 -r_2677 MLCL (2-18:1, 3-16:1, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 7.1303e-12 -r_2678 MLCL (2-18:1, 3-16:1, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.276 -r_2679 MLCL (2-18:1, 3-16:1, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.32303e-11 -r_2680 MLCL (2-18:1, 3-16:1, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.00036e-12 -r_2681 MLCL (2-18:1, 3-16:1, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 5.0596e-11 -r_2682 MLCL (2-18:1, 3-16:1, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2765 -r_2683 MLCL (2-18:1, 3-16:1, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -8.9635e-12 -r_2684 MLCL (2-18:1, 3-18:0, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 3.06404e-11 -r_2685 MLCL (2-18:1, 3-18:0, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.279 -r_2686 MLCL (2-18:1, 3-18:0, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2783 -r_2687 MLCL (2-18:1, 3-18:0, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -3.06404e-11 -r_2688 MLCL (2-18:1, 3-18:0, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -3.99947e-11 -r_2689 MLCL (2-18:1, 3-18:0, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 3.99947e-11 -r_2690 MLCL (2-18:1, 3-18:0, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2787 -r_2691 MLCL (2-18:1, 3-18:0, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2792 -r_2692 MLCL (2-18:1, 3-18:1, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 7.95275e-12 -r_2693 MLCL (2-18:1, 3-18:1, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -3.27951e-11 -r_2694 MLCL (2-18:1, 3-18:1, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -7.95275e-12 -r_2695 MLCL (2-18:1, 3-18:1, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2792 -r_2696 MLCL (2-18:1, 3-18:1, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -6.33609e-11 -r_2697 MLCL (2-18:1, 3-18:1, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 6.33609e-11 -r_2698 MLCL (2-18:1, 3-18:1, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2786 -r_2699 MLCL (2-18:1, 3-18:1, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2784 -r_2700 MLCL (2-18:1, 3-16:0, 4-18:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -7.36602e-11 -r_2701 MLCL (2-18:1, 3-16:0, 4-18:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2747 -r_2702 MLCL (2-18:1, 3-16:0, 4-18:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2785 -r_2703 MLCL (2-18:1, 3-16:0, 4-18:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 7.36602e-11 -r_2704 MLCL (2-18:1, 3-16:0, 4-18:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.09504e-11 -r_2705 MLCL (2-18:1, 3-16:0, 4-18:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 4.09504e-11 -r_2706 MLCL (2-18:1, 3-16:0, 4-18:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.279 -r_2707 MLCL (2-18:1, 3-16:0, 4-18:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2781 -r_2708 MLCL (2-18:1, 3-16:1, 4-18:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -6.40981e-11 -r_2709 MLCL (2-18:1, 3-16:1, 4-18:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 6.40981e-11 -r_2710 MLCL (2-18:1, 3-16:1, 4-18:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2772 -r_2711 MLCL (2-18:1, 3-16:1, 4-18:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2776 -r_2712 MLCL (2-18:1, 3-16:1, 4-18:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -6.63309e-11 -r_2713 MLCL (2-18:1, 3-16:1, 4-18:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 4.93987e-11 -r_2714 MLCL (2-18:1, 3-16:1, 4-18:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2786 -r_2715 MLCL (2-18:1, 3-16:1, 4-18:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2787 -r_2716 MLCL (1-16:0, 2-16:1, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.26281e-11 -r_2717 MLCL (1-16:0, 2-16:1, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2776 -r_2718 MLCL (1-16:0, 2-16:1, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.18456e-11 -r_2719 MLCL (1-16:0, 2-16:1, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2781 -r_2720 MLCL (1-16:0, 2-16:1, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -7.90994e-11 -r_2721 MLCL (1-16:0, 2-16:1, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2777 -r_2722 MLCL (1-16:0, 2-16:1, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2786 -r_2723 MLCL (1-16:0, 2-16:1, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -3.53673e-12 -r_2724 MLCL (1-16:0, 2-16:1, 4-18:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.84786e-11 -r_2725 MLCL (1-16:0, 2-16:1, 4-18:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2774 -r_2726 MLCL (1-16:0, 2-16:1, 4-18:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2786 -r_2727 MLCL (1-16:0, 2-16:1, 4-18:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 4.64659e-11 -r_2728 MLCL (1-16:0, 2-16:1, 4-18:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -5.0548e-11 -r_2729 MLCL (1-16:0, 2-16:1, 4-18:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 5.0548e-11 -r_2730 MLCL (1-16:0, 2-16:1, 4-18:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2784 -r_2731 MLCL (1-16:0, 2-16:1, 4-18:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2784 -r_2732 MLCL (1-16:1, 2-16:1, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.23181e-11 -r_2733 MLCL (1-16:1, 2-16:1, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.85506e-05 -r_2734 MLCL (1-16:1, 2-16:1, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.31095e-11 -r_2735 MLCL (1-16:1, 2-16:1, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.40261e-11 -r_2736 MLCL (1-16:1, 2-16:1, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 8.84344e-06 -r_2737 MLCL (1-16:1, 2-16:1, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 8.84343e-06 -r_2738 MLCL (1-16:1, 2-16:1, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2786 -r_2739 MLCL (1-16:1, 2-16:1, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2784 -r_2740 MLCL (1-16:1, 2-16:1, 4-18:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -1.13882e-11 -r_2741 MLCL (1-16:1, 2-16:1, 4-18:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2785 -r_2742 MLCL (1-16:1, 2-16:1, 4-18:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 3.7824e-11 -r_2743 MLCL (1-16:1, 2-16:1, 4-18:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -2.64357e-11 -r_2744 MLCL (1-16:1, 2-16:1, 4-18:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -5.93054e-11 -r_2745 MLCL (1-16:1, 2-16:1, 4-18:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 5.93054e-11 -r_2746 MLCL (1-16:1, 2-16:1, 4-18:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2789 -r_2747 MLCL (1-16:1, 2-16:1, 4-18:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2785 -r_2748 MLCL (1-18:0, 2-16:1, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.9833e-11 -r_2749 MLCL (1-18:0, 2-16:1, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.73381e-11 -r_2750 MLCL (1-18:0, 2-16:1, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.89937e-11 -r_2751 MLCL (1-18:0, 2-16:1, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2788 -r_2752 MLCL (1-18:0, 2-16:1, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -5.56568e-11 -r_2753 MLCL (1-18:0, 2-16:1, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2786 -r_2754 MLCL (1-18:0, 2-16:1, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 3.07327e-11 -r_2755 MLCL (1-18:0, 2-16:1, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.279 -r_2756 MLCL (1-18:0, 2-16:1, 4-18:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 3.00098e-11 -r_2757 MLCL (1-18:0, 2-16:1, 4-18:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 4.13589e-11 -r_2758 MLCL (1-18:0, 2-16:1, 4-18:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.59721e-11 -r_2759 MLCL (1-18:0, 2-16:1, 4-18:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -6.32436e-11 -r_2760 MLCL (1-18:0, 2-16:1, 4-18:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -5.70566e-11 -r_2761 MLCL (1-18:0, 2-16:1, 4-18:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 5.70566e-11 -r_2762 MLCL (1-18:0, 2-16:1, 4-18:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2788 -r_2763 MLCL (1-18:0, 2-16:1, 4-18:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.279 -r_2764 MLCL (1-18:1, 2-16:1, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 5.73794e-05 -r_2765 MLCL (1-18:1, 2-16:1, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 0 -r_2766 MLCL (1-18:1, 2-16:1, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -1.23137e-11 -r_2767 MLCL (1-18:1, 2-16:1, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -2.98552e-11 -r_2768 MLCL (1-18:1, 2-16:1, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 8.84339e-06 -r_2769 MLCL (1-18:1, 2-16:1, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -3.62483e-11 -r_2770 MLCL (1-18:1, 2-16:1, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2785 -r_2771 MLCL (1-18:1, 2-16:1, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 5.15818e-11 -r_2772 MLCL (1-18:1, 2-16:1, 4-18:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.61613e-11 -r_2773 MLCL (1-18:1, 2-16:1, 4-18:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 3.88288e-05 -r_2774 MLCL (1-18:1, 2-16:1, 4-18:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.7967e-11 -r_2775 MLCL (1-18:1, 2-16:1, 4-18:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2792 -r_2776 MLCL (1-18:1, 2-16:1, 4-18:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -5.61222e-11 -r_2777 MLCL (1-18:1, 2-16:1, 4-18:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 5.61222e-11 -r_2778 MLCL (1-18:1, 2-16:1, 4-18:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2784 -r_2779 MLCL (1-18:1, 2-16:1, 4-18:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2785 -r_2780 MLCL (1-16:0, 2-18:1, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -0.000753069 -r_2781 MLCL (1-16:0, 2-18:1, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 4.77467e-11 -r_2782 MLCL (1-16:0, 2-18:1, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 2.28848e-11 -r_2783 MLCL (1-16:0, 2-18:1, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 4.44711e-11 -r_2784 MLCL (1-16:0, 2-18:1, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.84244e-11 -r_2785 MLCL (1-16:0, 2-18:1, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2779 -r_2786 MLCL (1-16:0, 2-18:1, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.279 -r_2787 MLCL (1-16:0, 2-18:1, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -7.24381e-11 -r_2788 MLCL (1-16:0, 2-18:1, 4-18:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.61986e-11 -r_2789 MLCL (1-16:0, 2-18:1, 4-18:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -1.78701e-11 -r_2790 MLCL (1-16:0, 2-18:1, 4-18:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2784 -r_2791 MLCL (1-16:0, 2-18:1, 4-18:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2781 -r_2792 MLCL (1-16:0, 2-18:1, 4-18:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -8.4075e-12 -r_2793 MLCL (1-16:0, 2-18:1, 4-18:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 4.4027e-11 -r_2794 MLCL (1-16:0, 2-18:1, 4-18:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 6.79503e-05 -r_2795 MLCL (1-16:0, 2-18:1, 4-18:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -6.7768e-12 -r_2796 MLCL (1-16:1, 2-18:1, 4-16:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -1.29923e-11 -r_2797 MLCL (1-16:1, 2-18:1, 4-16:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 5.59766e-11 -r_2798 MLCL (1-16:1, 2-18:1, 4-16:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 1.29923e-11 -r_2799 MLCL (1-16:1, 2-18:1, 4-16:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2784 -r_2800 MLCL (1-16:1, 2-18:1, 4-16:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -2.11564e-12 -r_2801 MLCL (1-16:1, 2-18:1, 4-16:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 2.11564e-12 -r_2802 MLCL (1-16:1, 2-18:1, 4-16:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2792 -r_2803 MLCL (1-16:1, 2-18:1, 4-16:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 7.56017e-12 -r_2804 MLCL (1-16:1, 2-18:1, 4-18:1):PC (1-16:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 -2.97895e-11 -r_2805 MLCL (1-16:1, 2-18:1, 4-18:1):PC (1-16:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 2.97895e-11 -r_2806 MLCL (1-16:1, 2-18:1, 4-18:1):PC (1-18:0, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 3.17222e-11 -r_2807 MLCL (1-16:1, 2-18:1, 4-18:1):PC (1-18:1, 2-16:1) acyltransferase, mitochondrial membrane -1000 1000 0 5.35394e-12 -r_2808 MLCL (1-16:1, 2-18:1, 4-18:1):PC (1-16:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 -4.5894e-11 -r_2809 MLCL (1-16:1, 2-18:1, 4-18:1):PC (1-16:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 4.5894e-11 -r_2810 MLCL (1-16:1, 2-18:1, 4-18:1):PC (1-18:0, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 3.6426e-11 -r_2811 MLCL (1-16:1, 2-18:1, 4-18:1):PC (1-18:1, 2-18:1) acyltransferase, mitochondrial membrane -1000 1000 0 15.2787 -r_2812 lysoPC acyltransferase (1-16:0, 2-16:1), mitochondrial membrane 0 0 0 0 -r_2813 lysoPC acyltransferase (1-16:0, 2-18:1), mitochondrial membrane 0 0 0 0 -r_2814 lysoPC acyltransferase (1-16:1, 2-16:1), mitochondrial membrane 0 0 0 0 -r_2815 lysoPC acyltransferase (1-16:1, 2-18:1), mitochondrial membrane 0 0 0 0 -r_2816 lysoPC acyltransferase (1-18:0, 2-16:1), mitochondrial membrane 0 0 0 0 -r_2817 lysoPC acyltransferase (1-18:0, 2-18:1), mitochondrial membrane 0 0 0 0 -r_2818 lysoPC acyltransferase (1-18:1, 2-16:1), mitochondrial membrane 0 0 0 0 -r_2819 lysoPC acyltransferase (1-18:1, 2-18:1), mitochondrial membrane 0 0 0 0 -r_2820 phosphatidylinositol 4-kinase (1-16:0, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_2821 phosphatidylinositol 4-kinase (1-16:1, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_2822 phosphatidylinositol 4-kinase (1-18:0, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_2823 phosphatidylinositol 4-kinase (1-18:1, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_2824 phosphatidylinositol 4-kinase (1-16:0, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_2825 phosphatidylinositol 4-kinase (1-16:1, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_2826 phosphatidylinositol 4-kinase (1-18:0, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_2827 phosphatidylinositol 4-kinase (1-18:1, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_2828 phosphatidylinositol 4-kinase (1-16:0, 2-16:1), vacuolar membrane 0 0 0 0 -r_2829 phosphatidylinositol 4-kinase (1-16:1, 2-16:1), vacuolar membrane 0 0 0 0 -r_2830 phosphatidylinositol 4-kinase (1-18:0, 2-16:1), vacuolar membrane 0 0 0 0 -r_2831 phosphatidylinositol 4-kinase (1-18:1, 2-16:1), vacuolar membrane 0 0 0 0 -r_2832 phosphatidylinositol 4-kinase (1-16:0, 2-18:1), vacuolar membrane 0 0 0 0 -r_2833 phosphatidylinositol 4-kinase (1-16:1, 2-18:1), vacuolar membrane 0 0 0 0 -r_2834 phosphatidylinositol 4-kinase (1-18:0, 2-18:1), vacuolar membrane 0 0 0 0 -r_2835 phosphatidylinositol 4-kinase (1-18:1, 2-18:1), vacuolar membrane 0 0 0 0 -r_2836 phosphatidylinositol 4-kinase (1-16:0, 2-16:1), Golgi membrane 0 0.290399 0 0.000718124 -r_2837 phosphatidylinositol 4-kinase (1-16:1, 2-16:1), Golgi membrane 0 0.290399 0 0.000718124 -r_2838 phosphatidylinositol 4-kinase (1-18:0, 2-16:1), Golgi membrane 0 0.290399 0 0.000718124 -r_2839 phosphatidylinositol 4-kinase (1-18:1, 2-16:1), Golgi membrane 0 0.290399 0 0.000718124 -r_2840 phosphatidylinositol 4-kinase (1-16:0, 2-18:1), Golgi membrane 0 0.290399 0 0.000718124 -r_2841 phosphatidylinositol 4-kinase (1-16:1, 2-18:1), Golgi membrane 0 0.290399 0 0.000718124 -r_2842 phosphatidylinositol 4-kinase (1-18:0, 2-18:1), Golgi membrane 0 0.290399 0 0.000718124 -r_2843 phosphatidylinositol 4-kinase (1-18:1, 2-18:1), Golgi membrane 0 0.290399 0 0.000718124 -r_2844 phosphatidylinositol 4-kinase (1-16:0, 2-16:1), nucleus 0 0.1452 0 0.000718124 -r_2845 phosphatidylinositol 4-kinase (1-16:1, 2-16:1), nucleus 0 0.1452 0 0.000718124 -r_2846 phosphatidylinositol 4-kinase (1-18:0, 2-16:1), nucleus 0 0.1452 0 0.000718124 -r_2847 phosphatidylinositol 4-kinase (1-18:1, 2-16:1), nucleus 0 0.1452 0 0.000718124 -r_2848 phosphatidylinositol 4-kinase (1-16:0, 2-18:1), nucleus 0 0.1452 0 0.000718124 -r_2849 phosphatidylinositol 4-kinase (1-16:1, 2-18:1), nucleus 0 0.1452 0 0.000718124 -r_2850 phosphatidylinositol 4-kinase (1-18:0, 2-18:1), nucleus 0 0.1452 0 0.000718124 -r_2851 phosphatidylinositol 4-kinase (1-18:1, 2-18:1), nucleus 0 0.1452 0 0.000718124 -r_2852 phosphatidylinositol 3-kinase (1-16:0, 2-16:1), vacuolar membrane 0 0.290399 0 0.000117142 -r_2853 phosphatidylinositol 3-kinase (1-16:1, 2-16:1), vacuolar membrane 0 0.290399 0 0.000117142 -r_2854 phosphatidylinositol 3-kinase (1-18:0, 2-16:1), vacuolar membrane 0 0.290399 0 0.000117142 -r_2855 phosphatidylinositol 3-kinase (1-18:1, 2-16:1), vacuolar membrane 0 0.290399 0 0.000117255 -r_2856 phosphatidylinositol 3-kinase (1-16:0, 2-18:1), vacuolar membrane 0 0.290399 0 0.000117142 -r_2857 phosphatidylinositol 3-kinase (1-16:1, 2-18:1), vacuolar membrane 0 0.290399 0 0.000117142 -r_2858 phosphatidylinositol 3-kinase (1-18:0, 2-18:1), vacuolar membrane 0 0.290399 0 0.000117142 -r_2859 phosphatidylinositol 3-kinase (1-18:1, 2-18:1), vacuolar membrane 0 0.290399 0 0.000117255 -r_2860 PI 4-P 5-kinase (1-16:0, 2-16:1), nucleus 0 0.1452 0 0.000718124 -r_2861 PI 4-P 5-kinase (1-16:1, 2-16:1), nucleus 0 0.1452 0 0.000718124 -r_2862 PI 4-P 5-kinase (1-18:0, 2-16:1), nucleus 0 0.1452 0 0.000718124 -r_2863 PI 4-P 5-kinase (1-18:1, 2-16:1), nucleus 0 0.1452 0 0.000718124 -r_2864 PI 4-P 5-kinase (1-16:0, 2-18:1), nucleus 0 0.1452 0 0.000718124 -r_2865 PI 4-P 5-kinase (1-16:1, 2-18:1), nucleus 0 0.1452 0 0.000718124 -r_2866 PI 4-P 5-kinase (1-18:0, 2-18:1), nucleus 0 0.1452 0 0.000718124 -r_2867 PI 4-P 5-kinase (1-18:1, 2-18:1), nucleus 0 0.1452 0 0.000718124 -r_2868 PI 4-P 5-kinase (1-16:0, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_2869 PI 4-P 5-kinase (1-16:1, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_2870 PI 4-P 5-kinase (1-18:0, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_2871 PI 4-P 5-kinase (1-18:1, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_2872 PI 4-P 5-kinase (1-16:0, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_2873 PI 4-P 5-kinase (1-16:1, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_2874 PI 4-P 5-kinase (1-18:0, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_2875 PI 4-P 5-kinase (1-18:1, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_2876 PI 3-P 5-kinase (1-16:0, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_2877 PI 3-P 5-kinase (1-16:1, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_2878 PI 3-P 5-kinase (1-18:0, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_2879 PI 3-P 5-kinase (1-18:1, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_2880 PI 3-P 5-kinase (1-16:0, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_2881 PI 3-P 5-kinase (1-16:1, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_2882 PI 3-P 5-kinase (1-18:0, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_2883 PI 3-P 5-kinase (1-18:1, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_2884 PE (1-16:0, 2-16:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 -0.00102699 -r_2885 PE (1-16:1, 2-16:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00485275 -r_2886 PE (1-18:0, 2-16:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.004886 -r_2887 PE (1-18:1, 2-16:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00476144 -r_2888 PE (1-16:0, 2-18:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00596498 -r_2889 PE (1-16:1, 2-18:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00615782 -r_2890 PE (1-18:0, 2-18:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00659261 -r_2891 PE (1-18:1, 2-18:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00669721 -r_2892 PE (1-16:0, 2-16:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00278911 -r_2893 PE (1-16:1, 2-16:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00256151 -r_2894 PE (1-18:0, 2-16:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00253698 -r_2895 PE (1-18:1, 2-16:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 -0.000352828 -r_2896 PE (1-16:0, 2-18:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00596013 -r_2897 PE (1-16:1, 2-18:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00618899 -r_2898 PE (1-18:0, 2-18:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00206343 -r_2899 PE (1-18:1, 2-18:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00136238 -r_2900 PE (1-16:0, 2-16:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00195701 -r_2901 PE (1-16:1, 2-16:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00475641 -r_2902 PE (1-18:0, 2-16:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.0026158 -r_2903 PE (1-18:1, 2-16:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00418752 -r_2904 PE (1-16:0, 2-18:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00473114 -r_2905 PE (1-16:1, 2-18:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00578463 -r_2906 PE (1-18:0, 2-18:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00559966 -r_2907 PE (1-18:1, 2-18:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00559124 -r_2908 PE (1-16:0, 2-16:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00513432 -r_2909 PE (1-16:1, 2-16:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00135925 -r_2910 PE (1-18:0, 2-16:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00440319 -r_2911 PE (1-18:1, 2-16:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00474302 -r_2912 PE (1-16:0, 2-18:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.0057681 -r_2913 PE (1-16:1, 2-18:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00562548 -r_2914 PE (1-18:0, 2-18:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00578894 -r_2915 PE (1-18:1, 2-18:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00654201 -r_2916 PE (1-16:0, 2-16:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00473854 -r_2917 PE (1-16:1, 2-16:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00490335 -r_2918 PE (1-18:0, 2-16:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00263692 -r_2919 PE (1-18:1, 2-16:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00242932 -r_2920 PE (1-16:0, 2-18:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00607553 -r_2921 PE (1-16:1, 2-18:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00166357 -r_2922 PE (1-18:0, 2-18:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00602206 -r_2923 PE (1-18:1, 2-18:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00549308 -r_2924 PE (1-16:0, 2-16:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00146494 -r_2925 PE (1-16:1, 2-16:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00249994 -r_2926 PE (1-18:0, 2-16:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 -0.000280026 -r_2927 PE (1-18:1, 2-16:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 -0.000432804 -r_2928 PE (1-16:0, 2-18:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00310616 -r_2929 PE (1-16:1, 2-18:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00602579 -r_2930 PE (1-18:0, 2-18:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00592579 -r_2931 PE (1-18:1, 2-18:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00586674 -r_2932 PE (1-16:0, 2-16:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00495135 -r_2933 PE (1-16:1, 2-16:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00265318 -r_2934 PE (1-18:0, 2-16:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00318761 -r_2935 PE (1-18:1, 2-16:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00368524 -r_2936 PE (1-16:0, 2-18:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.004658 -r_2937 PE (1-16:1, 2-18:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.0056449 -r_2938 PE (1-18:0, 2-18:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00601109 -r_2939 PE (1-18:1, 2-18:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00552653 -r_2940 PE (1-16:0, 2-16:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00249161 -r_2941 PE (1-16:1, 2-16:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 -0.000211416 -r_2942 PE (1-18:0, 2-16:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00142987 -r_2943 PE (1-18:1, 2-16:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00464444 -r_2944 PE (1-16:0, 2-18:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00491381 -r_2945 PE (1-16:1, 2-18:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00601325 -r_2946 PE (1-18:0, 2-18:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00634128 -r_2947 PE (1-18:1, 2-18:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00560032 -r_2948 PC (1-16:0, 2-16:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00454823 -r_2949 PC (1-16:1, 2-16:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.0031321 -r_2950 PC (1-18:0, 2-16:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00426095 -r_2951 PC (1-18:1, 2-16:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00134915 -r_2952 PC (1-16:0, 2-18:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00396578 -r_2953 PC (1-16:1, 2-18:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00387609 -r_2954 PC (1-18:0, 2-18:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.0030658 -r_2955 PC (1-18:1, 2-18:1) diacylglycerol (1-16:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00410086 -r_2956 PC (1-16:0, 2-16:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.000892029 -r_2957 PC (1-16:1, 2-16:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.0040139 -r_2958 PC (1-18:0, 2-16:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00134045 -r_2959 PC (1-18:1, 2-16:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.000849404 -r_2960 PC (1-16:0, 2-18:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.0014576 -r_2961 PC (1-16:1, 2-18:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00311676 -r_2962 PC (1-18:0, 2-18:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00347129 -r_2963 PC (1-18:1, 2-18:1) diacylglycerol (1-16:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00132727 -r_2964 PC (1-16:0, 2-16:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00465194 -r_2965 PC (1-16:1, 2-16:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.000897718 -r_2966 PC (1-18:0, 2-16:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.000694139 -r_2967 PC (1-18:1, 2-16:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00485149 -r_2968 PC (1-16:0, 2-18:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00110581 -r_2969 PC (1-16:1, 2-18:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 -0.000459307 -r_2970 PC (1-18:0, 2-18:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00120308 -r_2971 PC (1-18:1, 2-18:1) diacylglycerol (1-18:0, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.0024377 -r_2972 PC (1-16:0, 2-16:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00470113 -r_2973 PC (1-16:1, 2-16:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00430568 -r_2974 PC (1-18:0, 2-16:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00420812 -r_2975 PC (1-18:1, 2-16:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00299584 -r_2976 PC (1-16:0, 2-18:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00299693 -r_2977 PC (1-16:1, 2-18:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00105084 -r_2978 PC (1-18:0, 2-18:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 -0.000579973 -r_2979 PC (1-18:1, 2-18:1) diacylglycerol (1-18:1, 2-16:1) acyltransferase, ER membrane -1000 1000 0 0.00231453 -r_2980 PC (1-16:0, 2-16:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.0032709 -r_2981 PC (1-16:1, 2-16:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.0014423 -r_2982 PC (1-18:0, 2-16:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00501107 -r_2983 PC (1-18:1, 2-16:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 -0.00171047 -r_2984 PC (1-16:0, 2-18:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00308494 -r_2985 PC (1-16:1, 2-18:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00409131 -r_2986 PC (1-18:0, 2-18:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00385356 -r_2987 PC (1-18:1, 2-18:1) diacylglycerol (1-16:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.0012506 -r_2988 PC (1-16:0, 2-16:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00146793 -r_2989 PC (1-16:1, 2-16:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00145326 -r_2990 PC (1-18:0, 2-16:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00424771 -r_2991 PC (1-18:1, 2-16:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00148367 -r_2992 PC (1-16:0, 2-18:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00122881 -r_2993 PC (1-16:1, 2-18:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00309606 -r_2994 PC (1-18:0, 2-18:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00311202 -r_2995 PC (1-18:1, 2-18:1) diacylglycerol (1-16:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00232518 -r_2996 PC (1-16:0, 2-16:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00272312 -r_2997 PC (1-16:1, 2-16:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 -0.000929897 -r_2998 PC (1-18:0, 2-16:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.000777585 -r_2999 PC (1-18:1, 2-16:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00432053 -r_3000 PC (1-16:0, 2-18:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00389634 -r_3001 PC (1-16:1, 2-18:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00351422 -r_3002 PC (1-18:0, 2-18:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.0031801 -r_3003 PC (1-18:1, 2-18:1) diacylglycerol (1-18:0, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00393253 -r_3004 PC (1-16:0, 2-16:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00032707 -r_3005 PC (1-16:1, 2-16:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00139109 -r_3006 PC (1-18:0, 2-16:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 3.23961e-05 -r_3007 PC (1-18:1, 2-16:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.000182353 -r_3008 PC (1-16:0, 2-18:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 0.00300815 -r_3009 PC (1-16:1, 2-18:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 -0.000519294 -r_3010 PC (1-18:0, 2-18:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 -0.000616422 -r_3011 PC (1-18:1, 2-18:1) diacylglycerol (1-18:1, 2-18:1) acyltransferase, ER membrane -1000 1000 0 -0.000620329 -r_3022 PC phospholipase B (1-16:0, 2-16:1), ER membrane 0 0.17424 0 0.0059663 -r_3023 PC phospholipase B (1-16:1, 2-16:1), ER membrane 0 0.17424 0 0.0059663 -r_3024 PC phospholipase B (1-18:0, 2-16:1), ER membrane 0 0.17424 0 0.0059663 -r_3025 PC phospholipase B (1-18:1, 2-16:1), ER membrane 0 0.17424 0 0.0059663 -r_3026 PC phospholipase B (1-16:0, 2-18:1), ER membrane 0 0.17424 0 0.00535082 -r_3027 PC phospholipase B (1-16:1, 2-18:1), ER membrane 0 0.17424 0 0.00535082 -r_3028 PC phospholipase B (1-18:0, 2-18:1), ER membrane 0 0.17424 0 0.00535082 -r_3029 PC phospholipase B (1-18:1, 2-18:1), ER membrane 0 0.17424 0 0.00535082 -r_3030 LPC phospholipase B (16:0), ER membrane 0 0.0486091 0 0.00315895 -r_3031 LPC phospholipase B (16:1), ER membrane 0 0.0486091 0 0.00316869 -r_3032 LPC phospholipase B (18:0), ER membrane 0 0.0486091 0 0.00239221 -r_3033 LPC phospholipase B (18:1), ER membrane 0 0.0486091 0 0.00239221 -r_3034 PC phospholipase B (1-16:0, 2-16:1), cell envelope 0 0.0483999 0 0.00280519 -r_3035 PC phospholipase B (1-16:1, 2-16:1), cell envelope 0 0.0483999 0 0.00281356 -r_3036 PC phospholipase B (1-18:0, 2-16:1), cell envelope 0 0.0483999 0 0.00239221 -r_3037 PC phospholipase B (1-18:1, 2-16:1), cell envelope 0 0.0483999 0 0.00239221 -r_3038 PC phospholipase B (1-16:0, 2-18:1), cell envelope 0 0.0483999 0 0.00267874 -r_3039 PC phospholipase B (1-16:1, 2-18:1), cell envelope 0 0.0483999 0 0.0026888 -r_3040 PC phospholipase B (1-18:0, 2-18:1), cell envelope 0 0.0483999 0 0.00238483 -r_3041 PC phospholipase B (1-18:1, 2-18:1), cell envelope 0 0.0483999 0 0.0023553 -r_3042 LPC phospholipase B (16:0), cell envelope 0 0.0483999 0 0.00280519 -r_3043 LPC phospholipase B (16:1), cell envelope 0 0.0483999 0 0.00281356 -r_3044 LPC phospholipase B (18:0), cell envelope 0 0.0483999 0 0.00239221 -r_3045 LPC phospholipase B (18:1), cell envelope 0 0.0483999 0 0.00239221 -r_3046 PE phospholipase B (1-16:0, 2-16:1), cell envelope 0 0 0 0 -r_3047 PE phospholipase B (1-16:1, 2-16:1), cell envelope 0 0 0 0 -r_3048 PE phospholipase B (1-18:0, 2-16:1), cell envelope 0 0 0 0 -r_3049 PE phospholipase B (1-18:1, 2-16:1), cell envelope 0 0 0 0 -r_3050 PE phospholipase B (1-16:0, 2-18:1), cell envelope 0 0 0 0 -r_3051 PE phospholipase B (1-16:1, 2-18:1), cell envelope 0 0 0 0 -r_3052 PE phospholipase B (1-18:0, 2-18:1), cell envelope 0 0 0 0 -r_3053 PE phospholipase B (1-18:1, 2-18:1), cell envelope 0 0 0 0 -r_3054 LPE phospholipase B (16:0), cell envelope 0 0 0 0 -r_3055 LPE phospholipase B (16:1), cell envelope 0 0 0 0 -r_3056 LPE phospholipase B (18:0), cell envelope 0 0 0 0 -r_3057 LPE phospholipase B (18:1), cell envelope 0 0 0 0 -r_3058 PS phospholipase B (1-16:0, 2-16:1), cell envelope 0 0 0 0 -r_3059 PS phospholipase B (1-16:1, 2-16:1), cell envelope 0 0 0 0 -r_3060 PS phospholipase B (1-18:0, 2-16:1), cell envelope 0 0 0 0 -r_3061 PS phospholipase B (1-18:1, 2-16:1), cell envelope 0 0 0 0 -r_3062 PS phospholipase B (1-16:0, 2-18:1), cell envelope 0 0 0 0 -r_3063 PS phospholipase B (1-16:1, 2-18:1), cell envelope 0 0 0 0 -r_3064 PS phospholipase B (1-18:0, 2-18:1), cell envelope 0 0 0 0 -r_3065 PS phospholipase B (1-18:1, 2-18:1), cell envelope 0 0 0 0 -r_3066 LPS phospholipase B (16:0), cell envelope 0 0 0 0 -r_3067 LPS phospholipase B (16:1), cell envelope 0 0 0 0 -r_3068 LPS phospholipase B (18:0), cell envelope 0 0 0 0 -r_3069 LPS phospholipase B (18:1), cell envelope 0 0 0 0 -r_3070 PI phospholipase B (1-16:0, 2-16:1), cell envelope 0 0.0141618 0 0.000819621 -r_3071 PI phospholipase B (1-16:1, 2-16:1), cell envelope 0 0.0141618 0 0.000819621 -r_3072 PI phospholipase B (1-18:0, 2-16:1), cell envelope 0 0.0141618 0 0.000819621 -r_3073 PI phospholipase B (1-18:1, 2-16:1), cell envelope 0 0.0141618 0 0.000819621 -r_3074 PI phospholipase B (1-16:0, 2-18:1), cell envelope 0 0.0141618 0 0.000819621 -r_3075 PI phospholipase B (1-16:1, 2-18:1), cell envelope 0 0.0141618 0 0.000819621 -r_3076 PI phospholipase B (1-18:0, 2-18:1), cell envelope 0 0.0141618 0 0.000819621 -r_3077 PI phospholipase B (1-18:1, 2-18:1), cell envelope 0 0.0141618 0 0.000819621 -r_3078 LPI phospholipase B (16:0), cell envelope 0 0.0141618 0 0.000819621 -r_3079 LPI phospholipase B (16:1), cell envelope 0 0.0141618 0 0.000819621 -r_3080 LPI phospholipase B (18:0), cell envelope 0 0.0141618 0 0.000819621 -r_3081 LPI phospholipase B (18:1), cell envelope 0 0.0141618 0 0.000819621 -r_3082 PI 4,5-P2 phospholipase C (1-16:0, 2-16:1), cytoplasm 0 0 0 0 -r_3083 PI 4,5-P2 phospholipase C (1-16:1, 2-16:1), cytoplasm 0 0 0 0 -r_3084 PI 4,5-P2 phospholipase C (1-18:0, 2-16:1), cytoplasm 0 0 0 0 -r_3085 PI 4,5-P2 phospholipase C (1-18:1, 2-16:1), cytoplasm 0 0 0 0 -r_3086 PI 4,5-P2 phospholipase C (1-16:0, 2-18:1), cytoplasm 0 0 0 0 -r_3087 PI 4,5-P2 phospholipase C (1-16:1, 2-18:1), cytoplasm 0 0 0 0 -r_3088 PI 4,5-P2 phospholipase C (1-18:0, 2-18:1), cytoplasm 0 0 0 0 -r_3089 PI 4,5-P2 phospholipase C (1-18:1, 2-18:1), cytoplasm 0 0 0 0 -r_3090 PI 4,5-P2 phospholipase C (1-16:0, 2-16:1), nucleus 0 0 0 0 -r_3091 PI 4,5-P2 phospholipase C (1-16:1, 2-16:1), nucleus 0 0 0 0 -r_3092 PI 4,5-P2 phospholipase C (1-18:0, 2-16:1), nucleus 0 0 0 0 -r_3093 PI 4,5-P2 phospholipase C (1-18:1, 2-16:1), nucleus 0 0 0 0 -r_3094 PI 4,5-P2 phospholipase C (1-16:0, 2-18:1), nucleus 0 0 0 0 -r_3095 PI 4,5-P2 phospholipase C (1-16:1, 2-18:1), nucleus 0 0 0 0 -r_3096 PI 4,5-P2 phospholipase C (1-18:0, 2-18:1), nucleus 0 0 0 0 -r_3097 PI 4,5-P2 phospholipase C (1-18:1, 2-18:1), nucleus 0 0 0 0 -r_3098 PG phospholipase C (1-16:0, 2-16:1), mitochondrial membrane 0 0.0793977 0 0.0295694 -r_3099 PG phospholipase C (1-16:1, 2-16:1), mitochondrial membrane 0 0.0794052 0 0.0295769 -r_3100 PG phospholipase C (1-18:0, 2-16:1), mitochondrial membrane 0 0.0793094 0 0.0294811 -r_3101 PG phospholipase C (1-18:1, 2-16:1), mitochondrial membrane 0 0.0793018 0 0.0294736 -r_3102 PG phospholipase C (1-16:0, 2-18:1), mitochondrial membrane 0 0.0792968 0 0.0294686 -r_3103 PG phospholipase C (1-16:1, 2-18:1), mitochondrial membrane 0 0.0793018 0 0.0294736 -r_3104 PC phospholipase D (1-16:0, 2-16:1), cell envelope 0 0.1089 0 0.00424065 -r_3105 PC phospholipase D (1-16:1, 2-16:1), cell envelope 0 0.1089 0 0.00424065 -r_3106 PC phospholipase D (1-18:0, 2-16:1), cell envelope 0 0.1089 0 0.00424065 -r_3107 PC phospholipase D (1-18:1, 2-16:1), cell envelope 0 0.1089 0 0.00424065 -r_3108 PC phospholipase D (1-16:0, 2-18:1), cell envelope 0 0.1089 0 0.00424065 -r_3109 PC phospholipase D (1-16:1, 2-18:1), cell envelope 0 0.1089 0 0.00424065 -r_3110 PC phospholipase D (1-18:0, 2-18:1), cell envelope 0 0.1089 0 0.00424065 -r_3111 PC phospholipase D (1-18:1, 2-18:1), cell envelope 0 0.1089 0 0.00424065 -r_3112 PI 3-P phosphatase (1-16:0, 2-16:1), cell envelope 0 0.1452 0 0.000117137 -r_3113 PI 3-P phosphatase (1-16:1, 2-16:1), cell envelope 0 0.1452 0 0.000117137 -r_3114 PI 3-P phosphatase (1-18:0, 2-16:1), cell envelope 0 0.1452 0 0.000117137 -r_3115 PI 3-P phosphatase (1-18:1, 2-16:1), cell envelope 0 0.1452 0 0.000117137 -r_3116 PI 3-P phosphatase (1-16:0, 2-18:1), cell envelope 0 0.1452 0 0.000117137 -r_3117 PI 3-P phosphatase (1-16:1, 2-18:1), cell envelope 0 0.1452 0 0.000117137 -r_3118 PI 3-P phosphatase (1-18:0, 2-18:1), cell envelope 0 0.1452 0 0.000117137 -r_3119 PI 3-P phosphatase (1-18:1, 2-18:1), cell envelope 0 0.1452 0 0.000117137 -r_3120 PI 3-P phosphatase (1-16:0, 2-16:1), cytoplasm 0 0.1452 0 0.000117139 -r_3121 PI 3-P phosphatase (1-16:1, 2-16:1), cytoplasm 0 0.1452 0 0.000117139 -r_3122 PI 3-P phosphatase (1-18:0, 2-16:1), cytoplasm 0 0.1452 0 0.000117139 -r_3123 PI 3-P phosphatase (1-18:1, 2-16:1), cytoplasm 0 0.1452 0 0.000117139 -r_3124 PI 3-P phosphatase (1-16:0, 2-18:1), cytoplasm 0 0.1452 0 0.000117139 -r_3125 PI 3-P phosphatase (1-16:1, 2-18:1), cytoplasm 0 0.1452 0 0.000117139 -r_3126 PI 3-P phosphatase (1-18:0, 2-18:1), cytoplasm 0 0.1452 0 0.000117139 -r_3127 PI 3-P phosphatase (1-18:1, 2-18:1), cytoplasm 0 0.1452 0 0.000117139 -r_3128 PI 3-P phosphatase (1-16:0, 2-16:1), ER membrane 0 0.290399 0 0.000117142 -r_3129 PI 3-P phosphatase (1-16:1, 2-16:1), ER membrane 0 0.290399 0 0.000117142 -r_3130 PI 3-P phosphatase (1-18:0, 2-16:1), ER membrane 0 0.290399 0 0.000117142 -r_3131 PI 3-P phosphatase (1-18:1, 2-16:1), ER membrane 0 0.290399 0 0.000117142 -r_3132 PI 3-P phosphatase (1-16:0, 2-18:1), ER membrane 0 0.290399 0 0.000117142 -r_3133 PI 3-P phosphatase (1-16:1, 2-18:1), ER membrane 0 0.290399 0 0.000117142 -r_3134 PI 3-P phosphatase (1-18:0, 2-18:1), ER membrane 0 0.290399 0 0.000117142 -r_3135 PI 3-P phosphatase (1-18:1, 2-18:1), ER membrane 0 0.290399 0 0.000117142 -r_3136 PI 3-P phosphatase (1-16:0, 2-16:1), Golgi membrane 0 0.290399 0 0.000117142 -r_3137 PI 3-P phosphatase (1-16:1, 2-16:1), Golgi membrane 0 0.290399 0 0.000117142 -r_3138 PI 3-P phosphatase (1-18:0, 2-16:1), Golgi membrane 0 0.290399 0 0.000117142 -r_3139 PI 3-P phosphatase (1-18:1, 2-16:1), Golgi membrane 0 0.290399 0 0.000117142 -r_3140 PI 3-P phosphatase (1-16:0, 2-18:1), Golgi membrane 0 0.290399 0 0.000117142 -r_3141 PI 3-P phosphatase (1-16:1, 2-18:1), Golgi membrane 0 0.290399 0 0.000117142 -r_3142 PI 3-P phosphatase (1-18:0, 2-18:1), Golgi membrane 0 0.290399 0 0.000117142 -r_3143 PI 3-P phosphatase (1-18:1, 2-18:1), Golgi membrane 0 0.290399 0 0.000117142 -r_3144 PI 4-P phosphatase (1-16:0, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_3145 PI 4-P phosphatase (1-16:1, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_3146 PI 4-P phosphatase (1-18:0, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_3147 PI 4-P phosphatase (1-18:1, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_3148 PI 4-P phosphatase (1-16:0, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_3149 PI 4-P phosphatase (1-16:1, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_3150 PI 4-P phosphatase (1-18:0, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_3151 PI 4-P phosphatase (1-18:1, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_3152 PI 4-P phosphatase (1-16:0, 2-16:1), cytoplasm 0 0.290399 0 0.215391 -r_3153 PI 4-P phosphatase (1-16:1, 2-16:1), cytoplasm 0 0.290399 0 0.215378 -r_3154 PI 4-P phosphatase (1-18:0, 2-16:1), cytoplasm 0 0.290399 0 0.215391 -r_3155 PI 4-P phosphatase (1-18:1, 2-16:1), cytoplasm 0 0.290399 0 0.215391 -r_3156 PI 4-P phosphatase (1-16:0, 2-18:1), cytoplasm 0 0.290399 0 0.215391 -r_3157 PI 4-P phosphatase (1-16:1, 2-18:1), cytoplasm 0 0.290399 0 0.215391 -r_3158 PI 4-P phosphatase (1-18:0, 2-18:1), cytoplasm 0 0.290399 0 0.215391 -r_3159 PI 4-P phosphatase (1-18:1, 2-18:1), cytoplasm 0 0.290399 0 0.215391 -r_3160 PI 4-P phosphatase (1-16:0, 2-16:1), ER membrane 0 0.290399 0 0.107696 -r_3161 PI 4-P phosphatase (1-16:1, 2-16:1), ER membrane 0 0.290399 0 0.107696 -r_3162 PI 4-P phosphatase (1-18:0, 2-16:1), ER membrane 0 0.290399 0 0.107696 -r_3163 PI 4-P phosphatase (1-18:1, 2-16:1), ER membrane 0 0.290399 0 0.107696 -r_3164 PI 4-P phosphatase (1-16:0, 2-18:1), ER membrane 0 0.290399 0 0.107696 -r_3165 PI 4-P phosphatase (1-16:1, 2-18:1), ER membrane 0 0.290399 0 0.107696 -r_3166 PI 4-P phosphatase (1-18:0, 2-18:1), ER membrane 0 0.290399 0 0.107696 -r_3167 PI 4-P phosphatase (1-18:1, 2-18:1), ER membrane 0 0.290399 0 0.107696 -r_3168 PI 4-P phosphatase (1-16:0, 2-16:1), Golgi membrane 0 0.290399 0 0.000718124 -r_3169 PI 4-P phosphatase (1-16:1, 2-16:1), Golgi membrane 0 0.290399 0 0.000718124 -r_3170 PI 4-P phosphatase (1-18:0, 2-16:1), Golgi membrane 0 0.290399 0 0.000718124 -r_3171 PI 4-P phosphatase (1-18:1, 2-16:1), Golgi membrane 0 0.290399 0 0.000718124 -r_3172 PI 4-P phosphatase (1-16:0, 2-18:1), Golgi membrane 0 0.290399 0 0.000718124 -r_3173 PI 4-P phosphatase (1-16:1, 2-18:1), Golgi membrane 0 0.290399 0 0.000718124 -r_3174 PI 4-P phosphatase (1-18:0, 2-18:1), Golgi membrane 0 0.290399 0 0.000718124 -r_3175 PI 4-P phosphatase (1-18:1, 2-18:1), Golgi membrane 0 0.290399 0 0.000718124 -r_3176 PI 3,5-P2 phosphatase (1-16:0, 2-16:1), cell envelope 0 0.1452 0 0.000117137 -r_3177 PI 3,5-P2 phosphatase (1-16:1, 2-16:1), cell envelope 0 0.1452 0 0.000117137 -r_3178 PI 3,5-P2 phosphatase (1-18:0, 2-16:1), cell envelope 0 0.1452 0 0.000117137 -r_3179 PI 3,5-P2 phosphatase (1-18:1, 2-16:1), cell envelope 0 0.1452 0 0.000117137 -r_3180 PI 3,5-P2 phosphatase (1-16:0, 2-18:1), cell envelope 0 0.1452 0 0.000117137 -r_3181 PI 3,5-P2 phosphatase (1-16:1, 2-18:1), cell envelope 0 0.1452 0 0.000117137 -r_3182 PI 3,5-P2 phosphatase (1-18:0, 2-18:1), cell envelope 0 0.1452 0 0.000117137 -r_3183 PI 3,5-P2 phosphatase (1-18:1, 2-18:1), cell envelope 0 0.1452 0 0.000117137 -r_3184 PI 3,5-P2 phosphatase (1-16:0, 2-16:1), cytoplasm 0 0.1452 0 0.000117139 -r_3185 PI 3,5-P2 phosphatase (1-16:1, 2-16:1), cytoplasm 0 0.1452 0 0.000117139 -r_3186 PI 3,5-P2 phosphatase (1-18:0, 2-16:1), cytoplasm 0 0.1452 0 0.000117139 -r_3187 PI 3,5-P2 phosphatase (1-18:1, 2-16:1), cytoplasm 0 0.1452 0 0.000117139 -r_3188 PI 3,5-P2 phosphatase (1-16:0, 2-18:1), cytoplasm 0 0.1452 0 0.000117139 -r_3189 PI 3,5-P2 phosphatase (1-16:1, 2-18:1), cytoplasm 0 0.1452 0 0.000117139 -r_3190 PI 3,5-P2 phosphatase (1-18:0, 2-18:1), cytoplasm 0 0.1452 0 0.000117139 -r_3191 PI 3,5-P2 phosphatase (1-18:1, 2-18:1), cytoplasm 0 0.1452 0 0.000117139 -r_3192 PI 4,5-P2 phosphatase (1-16:0, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_3193 PI 4,5-P2 phosphatase (1-16:1, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_3194 PI 4,5-P2 phosphatase (1-18:0, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_3195 PI 4,5-P2 phosphatase (1-18:1, 2-16:1), cell envelope 0 0.290399 0 0.107696 -r_3196 PI 4,5-P2 phosphatase (1-16:0, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_3197 PI 4,5-P2 phosphatase (1-16:1, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_3198 PI 4,5-P2 phosphatase (1-18:0, 2-18:1), cell envelope 0 0.290399 0 0.107696 -r_3199 PI 4,5-P2 phosphatase (1-18:1, 2-18:1), cell envelope 0 0.290399 0 0.108414 -r_3200 PI 4,5-P2 phosphatase (1-16:0, 2-16:1), cytoplasm 0 0.290399 0 0.107696 -r_3201 PI 4,5-P2 phosphatase (1-16:1, 2-16:1), cytoplasm 0 0.290399 0 0.107696 -r_3202 PI 4,5-P2 phosphatase (1-18:0, 2-16:1), cytoplasm 0 0.290399 0 0.107696 -r_3203 PI 4,5-P2 phosphatase (1-18:1, 2-16:1), cytoplasm 0 0.290399 0 0.107696 -r_3204 PI 4,5-P2 phosphatase (1-16:0, 2-18:1), cytoplasm 0 0.290399 0 0.107696 -r_3205 PI 4,5-P2 phosphatase (1-16:1, 2-18:1), cytoplasm 0 0.290399 0 0.107696 -r_3206 PI 4,5-P2 phosphatase (1-18:0, 2-18:1), cytoplasm 0 0.290399 0 0.107696 -r_3207 PI 4,5-P2 phosphatase (1-18:1, 2-18:1), cytoplasm 0 0.290399 0 0.107696 -r_3208 PI 4,5-P2 phosphatase (1-16:0, 2-16:1), ER membrane 0 0.290399 0 0.107696 -r_3209 PI 4,5-P2 phosphatase (1-16:1, 2-16:1), ER membrane 0 0.290399 0 0.107696 -r_3210 PI 4,5-P2 phosphatase (1-18:0, 2-16:1), ER membrane 0 0.290399 0 0.107696 -r_3211 PI 4,5-P2 phosphatase (1-18:1, 2-16:1), ER membrane 0 0.290399 0 0.107696 -r_3212 PI 4,5-P2 phosphatase (1-16:0, 2-18:1), ER membrane 0 0.290399 0 0.107696 -r_3213 PI 4,5-P2 phosphatase (1-16:1, 2-18:1), ER membrane 0 0.290399 0 0.107696 -r_3214 PI 4,5-P2 phosphatase (1-18:0, 2-18:1), ER membrane 0 0.290399 0 0.107696 -r_3215 PI 4,5-P2 phosphatase (1-18:1, 2-18:1), ER membrane 0 0.290399 0 0.107696 -r_3216 PI 3,5-P2 phosphatase (1-16:0, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3217 PI 3,5-P2 phosphatase (1-16:1, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3218 PI 3,5-P2 phosphatase (1-18:0, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3219 PI 3,5-P2 phosphatase (1-18:1, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3220 PI 3,5-P2 phosphatase (1-16:0, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3221 PI 3,5-P2 phosphatase (1-16:1, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3222 PI 3,5-P2 phosphatase (1-18:0, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3223 PI 3,5-P2 phosphatase (1-18:1, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3224 DGPP phosphatase (1-16:0, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3225 DGPP phosphatase (1-16:1, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3226 DGPP phosphatase (1-18:0, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3227 DGPP phosphatase (1-18:1, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3228 DGPP phosphatase (1-16:0, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3229 DGPP phosphatase (1-16:1, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3230 DGPP phosphatase (1-18:0, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3231 DGPP phosphatase (1-18:1, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3232 DGPP phosphatase (1-16:0, 2-16:1), Golgi membrane 0 0.290399 0 0.107696 -r_3233 DGPP phosphatase (1-16:1, 2-16:1), Golgi membrane 0 0.290399 0 0.107696 -r_3234 DGPP phosphatase (1-18:0, 2-16:1), Golgi membrane 0 0.290399 0 0.107696 -r_3235 DGPP phosphatase (1-18:1, 2-16:1), Golgi membrane 0 0.290399 0 0.107696 -r_3236 DGPP phosphatase (1-16:0, 2-18:1), Golgi membrane 0 0.290399 0 0.107696 -r_3237 DGPP phosphatase (1-16:1, 2-18:1), Golgi membrane 0 0.290399 0 0.107696 -r_3238 DGPP phosphatase (1-18:0, 2-18:1), Golgi membrane 0 0.290399 0 0.107696 -r_3239 DGPP phosphatase (1-18:1, 2-18:1), Golgi membrane 0 0.290399 0 0.107696 -r_3240 lysoPA phosphatase (16:0), cytoplasm 0 0 0 0 -r_3241 lysoPA phosphatase (16:1), cytoplasm 0 0 0 0 -r_3242 lysoPA phosphatase (18:0), cytoplasm 0 0 0 0 -r_3243 lysoPA phosphatase (18:1), cytoplasm 0 0 0 0 -r_3244 lysoPA phosphatase (16:0), vacuolar membrane 0 0 0 0 -r_3245 lysoPA phosphatase (16:1), vacuolar membrane 0 0 0 0 -r_3246 lysoPA phosphatase (18:0), vacuolar membrane 0 0 0 0 -r_3247 lysoPA phosphatase (18:1), vacuolar membrane 0 0 0 0 -r_3248 lysoPA phosphatase (16:0), Golgi membrane 0 0 0 0 -r_3249 lysoPA phosphatase (16:1), Golgi membrane 0 0 0 0 -r_3250 lysoPA phosphatase (18:0), Golgi membrane 0 0 0 0 -r_3251 lysoPA phosphatase (18:1), Golgi membrane 0 0 0 0 -r_3252 ergosteryl ester hydrolase (16:1), lipid particle 0 0.17424 0 0.0059663 -r_3253 ergosteryl ester hydrolase (18:1), lipid particle 0 0.17424 0 0.00535082 -r_3254 episteryl ester hydrolase (16:1), lipid particle 0 0.17424 0 0.0059663 -r_3255 episteryl ester hydrolase (18:1), lipid particle 0 0.17424 0 0.00535082 -r_3256 fecosteryl ester hydrolase (16:1), lipid particle 0 0.17424 0 0.0059663 -r_3257 fecosteryl ester hydrolase (18:1), lipid particle 0 0.17424 0 0.00535082 -r_3258 lanosteryl ester hydrolase (16:1), lipid particle 0 0.17424 0 0.0059663 -r_3259 lanosteryl ester hydrolase (18:1), lipid particle 0 0.17424 0 0.00535082 -r_3260 zymosteryl ester hydrolase (16:1), lipid particle 0 0.17424 0 0.0059663 -r_3261 zymosteryl ester hydrolase (18:1), lipid particle 0 0.17424 0 0.00535082 -r_3262 zymosteryl ester hydrolase (16:1), cell envelope 0 0.17424 0 0.0059663 -r_3263 zymosteryl ester hydrolase (18:1), cell envelope 0 0.17424 0 0.00535082 -r_3264 TAG lipase (1-16:0, 2-16:1, 3-16:0), lipid particle 0 0.17424 0 0.0122944 -r_3265 TAG lipase (1-16:0, 2-16:1, 3-16:1), lipid particle 0 0.17424 0 0.0119326 -r_3266 TAG lipase (1-16:0, 2-16:1, 3-18:0), lipid particle 0 0.17424 0 0.0106412 -r_3267 TAG lipase (1-16:0, 2-16:1, 3-18:1), lipid particle 0 0.17424 0 0.0160329 -r_3268 TAG lipase (1-16:1, 2-16:1, 3-16:0), lipid particle 0 0.17424 0 0.0118445 -r_3269 TAG lipase (1-16:1, 2-16:1, 3-16:1), lipid particle 0 0.17424 0 0.0109348 -r_3270 TAG lipase (1-16:1, 2-16:1, 3-18:0), lipid particle 0 0.17424 0 0.0106412 -r_3271 TAG lipase (1-16:1, 2-16:1, 3-18:1), lipid particle 0 0.17424 0 0.0109403 -r_3272 TAG lipase (1-18:0, 2-16:1, 3-16:0), lipid particle 0 0.17424 0 0.0118445 -r_3273 TAG lipase (1-18:0, 2-16:1, 3-16:1), lipid particle 0 0.17424 0 0.0115067 -r_3274 TAG lipase (1-18:0, 2-16:1, 3-18:0), lipid particle 0 0.17424 0 0.00532059 -r_3275 TAG lipase (1-18:0, 2-16:1, 3-18:1), lipid particle 0 0.17424 0 0.0109376 -r_3276 TAG lipase (1-18:1, 2-16:1, 3-16:0), lipid particle 0 0.17424 0 0.0118445 -r_3277 TAG lipase (1-18:1, 2-16:1, 3-16:1), lipid particle 0 0.17424 0 0.0175593 -r_3278 TAG lipase (1-18:1, 2-16:1, 3-18:0), lipid particle 0 0.17424 0 0.00570914 -r_3279 TAG lipase (1-18:1, 2-16:1, 3-18:1), lipid particle 0 0.17424 0 0.0160323 -r_3280 TAG lipase (1-16:0, 2-18:1, 3-16:0), lipid particle 0 0.17424 0 0.00611675 -r_3281 TAG lipase (1-16:0, 2-18:1, 3-16:1), lipid particle 0 0.17424 0 0.0119326 -r_3282 TAG lipase (1-16:0, 2-18:1, 3-18:0), lipid particle 0 0.17424 0 0.0106412 -r_3283 TAG lipase (1-16:0, 2-18:1, 3-18:1), lipid particle 0 0.17424 0 0.0155827 -r_3284 TAG lipase (1-16:1, 2-18:1, 3-16:0), lipid particle 0 0.17424 0 0.0118445 -r_3285 TAG lipase (1-16:1, 2-18:1, 3-16:1), lipid particle 0 0.17424 0 0.0119326 -r_3286 TAG lipase (1-16:1, 2-18:1, 3-18:0), lipid particle 0 0.17424 0 0.0105804 -r_3287 TAG lipase (1-16:1, 2-18:1, 3-18:1), lipid particle 0 0.17424 0 0.0156007 -r_3288 TAG lipase (1-18:0, 2-18:1, 3-16:0), lipid particle 0 0.17424 0 0.0118445 -r_3289 TAG lipase (1-18:0, 2-18:1, 3-16:1), lipid particle 0 0.17424 0 0.0115351 -r_3290 TAG lipase (1-18:0, 2-18:1, 3-18:0), lipid particle 0 0.17424 0 0.0159218 -r_3291 TAG lipase (1-18:0, 2-18:1, 3-18:1), lipid particle 0 0.17424 0 0.0106837 -r_3292 TAG lipase (1-18:1, 2-18:1, 3-16:0), lipid particle 0 0.17424 0 0.0118445 -r_3293 TAG lipase (1-18:1, 2-18:1, 3-16:1), lipid particle 0 0.17424 0 0.011593 -r_3294 TAG lipase (1-18:1, 2-18:1, 3-18:0), lipid particle 0 0.17424 0 0.0112866 -r_3295 TAG lipase (1-18:1, 2-18:1, 3-18:1), lipid particle 0 0.17424 0 0.0159951 -r_3296 DAG lipase (1-16:0, 2-16:1), lipid particle 0 0.0729075 0 0.00224698 -r_3297 DAG lipase (1-16:1, 2-16:1), lipid particle 0 0.0729075 0 0.00449396 -r_3298 DAG lipase (1-18:0, 2-16:1), lipid particle 0 0.0729075 0 0.00224698 -r_3299 DAG lipase (1-18:1, 2-16:1), lipid particle 0 0.0729075 0 0.00224698 -r_3300 DAG lipase (1-16:0, 2-18:1), lipid particle 0 0.0729075 0 0.00224698 -r_3301 DAG lipase (1-16:1, 2-18:1), lipid particle 0 0.0729075 0 0.00224698 -r_3302 DAG lipase (1-18:0, 2-18:1), lipid particle 0 0.0729075 0 0.00224698 -r_3303 DAG lipase (1-18:1, 2-18:1), lipid particle 0 0.0729075 0 0.00224698 -r_3304 DAG lipase (1-16:0, 2-18:1), mitochondrion 0 0 0 0 -r_3305 DAG lipase (1-16:1, 2-18:1), mitochondrion 0 0 0 0 -r_3306 DAG lipase (1-18:0, 2-18:1), mitochondrion 0 0 0 0 -r_3307 DAG lipase (1-18:1, 2-18:1), mitochondrion 0 0 0 0 -r_3308 MAG lipase (1-16:0), lipid particle 0 0.0729075 0 0.00224698 -r_3309 MAG lipase (1-16:1), lipid particle 0 0.0729075 0 0.00224698 -r_3310 MAG lipase (1-18:0), lipid particle 0 0.0729075 0 0.00224698 -r_3311 MAG lipase (1-18:1), lipid particle 0 0.0729075 0 0.00224698 -r_3312 lysoPE (1-16:0) oleoyl-CoA acyltransferase, lipid particle 0 0.174993 0 0.00622707 -r_3313 lysoPE (1-16:1) oleoyl-CoA acyltransferase, lipid particle 0 0.174993 0 0.00622707 -r_3314 lysoPE (1-18:0) oleoyl-CoA acyltransferase, lipid particle 0 0.174993 0 0.00622707 -r_3315 lysoPE (1-18:1) oleoyl-CoA acyltransferase, lipid particle 0 0.174993 0 0.00622707 -r_3316 PC phospholipase A2 (1-16:0, 2-16:1), lipid particle 0 0.17424 0 0.0059663 -r_3317 PC phospholipase A2 (1-16:1, 2-16:1), lipid particle 0 0.17424 0 0.0059663 -r_3318 PC phospholipase A2 (1-18:0, 2-16:1), lipid particle 0 0.17424 0 0.0059663 -r_3319 PC phospholipase A2 (1-18:1, 2-16:1), lipid particle 0 0.17424 0 0.0059663 -r_3320 PC phospholipase A2 (1-16:0, 2-18:1), lipid particle 0 0.17424 0 0.00535082 -r_3321 PC phospholipase A2 (1-16:1, 2-18:1), lipid particle 0 0.17424 0 0.00535082 -r_3322 PC phospholipase A2 (1-18:0, 2-18:1), lipid particle 0 0.17424 0 0.00535082 -r_3323 PC phospholipase A2 (1-18:1, 2-18:1), lipid particle 0 0.17424 0 0.00535082 -r_3324 PE phospholipase A2 (1-16:0, 2-16:1), lipid particle 0 0.17424 0 0.0059663 -r_3325 PE phospholipase A2 (1-16:1, 2-16:1), lipid particle 0 0.17424 0 0.0059663 -r_3326 PE phospholipase A2 (1-18:0, 2-16:1), lipid particle 0 0.17424 0 0.0059663 -r_3327 PE phospholipase A2 (1-18:1, 2-16:1), lipid particle 0 0.17424 0 0.0059663 -r_3328 PE phospholipase A2 (1-16:0, 2-18:1), lipid particle 0 0.17424 0 0.00535082 -r_3329 PE phospholipase A2 (1-16:1, 2-18:1), lipid particle 0 0.17424 0 0.00535082 -r_3330 PE phospholipase A2 (1-18:0, 2-18:1), lipid particle 0 0.17424 0 0.00535082 -r_3331 PE phospholipase A2 (1-18:1, 2-18:1), lipid particle 0 0.17424 0 0.00535082 -r_3332 PA kinase (1-16:0, 2-16:1), Golgi membrane 0 0.290399 0 0.107696 -r_3333 PA kinase (1-16:1, 2-16:1), Golgi membrane 0 0.290399 0 0 -r_3334 PA kinase (1-18:0, 2-16:1), Golgi membrane 0 0.290399 0 0.107696 -r_3335 PA kinase (1-18:1, 2-16:1), Golgi membrane 0 0.290399 0 0.107696 -r_3336 PA kinase (1-16:0, 2-18:1), Golgi membrane 0 0.290399 0 0.107696 -r_3337 PA kinase (1-16:1, 2-18:1), Golgi membrane 0 0.290399 0 0.107696 -r_3338 PA kinase (1-18:0, 2-18:1), Golgi membrane 0 0.290399 0 0.107696 -r_3339 PA kinase (1-18:1, 2-18:1), Golgi membrane 0 0.290399 0 0.107696 -r_3340 PA kinase (1-16:0, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3341 PA kinase (1-16:1, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3342 PA kinase (1-18:0, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3343 PA kinase (1-18:1, 2-16:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3344 PA kinase (1-16:0, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3345 PA kinase (1-16:1, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3346 PA kinase (1-18:0, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3347 PA kinase (1-18:1, 2-18:1), vacuolar membrane 0 0.290399 0 0.107696 -r_3348 inositolphosphotransferase (PI (1-16:0, 2-16:1) MIPC-A (C24)) 0 0 0 0 -r_3349 inositolphosphotransferase (PI (1-16:1, 2-16:1) MIPC-A (C24)) 0 0 0 0 -r_3350 inositolphosphotransferase (PI (1-18:0, 2-16:1) MIPC-A (C24)) 0 0 0 0 -r_3351 inositolphosphotransferase (PI (1-18:1, 2-16:1) MIPC-A (C24)) 0 0 0 0 -r_3352 inositolphosphotransferase (PI (1-16:0, 2-18:1) MIPC-A (C24)) 0 0 0 0 -r_3353 inositolphosphotransferase (PI (1-16:1, 2-18:1) MIPC-A (C24)) 0 0 0 0 -r_3354 inositolphosphotransferase (PI (1-18:0, 2-18:1) MIPC-A (C24)) 0 0 0 0 -r_3355 inositolphosphotransferase (PI (1-18:1, 2-18:1) MIPC-A (C24)) 0 0 0 0 -r_3356 inositolphosphotransferase (PI (1-16:0, 2-16:1) MIPC-A (C26)) 0 0 0 0 -r_3357 inositolphosphotransferase (PI (1-16:1, 2-16:1) MIPC-A (C26)) 0 0 0 0 -r_3358 inositolphosphotransferase (PI (1-18:0, 2-16:1) MIPC-A (C26)) 0 0 0 0 -r_3359 inositolphosphotransferase (PI (1-18:1, 2-16:1) MIPC-A (C26)) 0 0 0 0 -r_3360 inositolphosphotransferase (PI (1-16:0, 2-18:1) MIPC-A (C26)) 0 0 0 0 -r_3361 inositolphosphotransferase (PI (1-16:1, 2-18:1) MIPC-A (C26)) 0 0 0 0 -r_3362 inositolphosphotransferase (PI (1-18:0, 2-18:1) MIPC-A (C26)) 0 0 0 0 -r_3363 inositolphosphotransferase (PI (1-18:1, 2-18:1) MIPC-A (C26)) 0 0 0 0 -r_3364 inositolphosphotransferase (PI (1-16:0, 2-16:1) MIPC-B' (C24)) 0 0 0 0 -r_3365 inositolphosphotransferase (PI (1-16:1, 2-16:1) MIPC-B' (C24)) 0 0 0 0 -r_3366 inositolphosphotransferase (PI (1-18:0, 2-16:1) MIPC-B' (C24)) 0 0 0 0 -r_3367 inositolphosphotransferase (PI (1-18:1, 2-16:1) MIPC-B' (C24)) 0 0 0 0 -r_3368 inositolphosphotransferase (PI (1-16:0, 2-18:1) MIPC-B' (C24)) 0 0 0 0 -r_3369 inositolphosphotransferase (PI (1-16:1, 2-18:1) MIPC-B' (C24)) 0 0 0 0 -r_3370 inositolphosphotransferase (PI (1-18:0, 2-18:1) MIPC-B' (C24)) 0 0 0 0 -r_3371 inositolphosphotransferase (PI (1-18:1, 2-18:1) MIPC-B' (C24)) 0 0 0 0 -r_3372 inositolphosphotransferase (PI (1-16:0, 2-16:1) MIPC-B' (C26)) 0 0 0 0 -r_3373 inositolphosphotransferase (PI (1-16:1, 2-16:1) MIPC-B' (C26)) 0 0 0 0 -r_3374 inositolphosphotransferase (PI (1-18:0, 2-16:1) MIPC-B' (C26)) 0 0 0 0 -r_3375 inositolphosphotransferase (PI (1-18:1, 2-16:1) MIPC-B' (C26)) 0 0 0 0 -r_3376 inositolphosphotransferase (PI (1-16:0, 2-18:1) MIPC-B' (C26)) 0 0 0 0 -r_3377 inositolphosphotransferase (PI (1-16:1, 2-18:1) MIPC-B' (C26)) 0 0 0 0 -r_3378 inositolphosphotransferase (PI (1-18:0, 2-18:1) MIPC-B' (C26)) 0 0 0 0 -r_3379 inositolphosphotransferase (PI (1-18:1, 2-18:1) MIPC-B' (C26)) 0 0 0 0 -r_3380 inositolphosphotransferase (PI (1-16:0, 2-16:1) MIPC-B (C24)) 0 0 0 0 -r_3381 inositolphosphotransferase (PI (1-16:1, 2-16:1) MIPC-B (C24)) 0 0 0 0 -r_3382 inositolphosphotransferase (PI (1-18:0, 2-16:1) MIPC-B (C24)) 0 0 0 0 -r_3383 inositolphosphotransferase (PI (1-18:1, 2-16:1) MIPC-B (C24)) 0 0 0 0 -r_3384 inositolphosphotransferase (PI (1-16:0, 2-18:1) MIPC-B (C24)) 0 0 0 0 -r_3385 inositolphosphotransferase (PI (1-16:1, 2-18:1) MIPC-B (C24)) 0 0 0 0 -r_3386 inositolphosphotransferase (PI (1-18:0, 2-18:1) MIPC-B (C24)) 0 0 0 0 -r_3387 inositolphosphotransferase (PI (1-18:1, 2-18:1) MIPC-B (C24)) 0 0 0 0 -r_3388 inositolphosphotransferase (PI (1-16:0, 2-16:1) MIPC-B (C26)) 0 0 0 0 -r_3389 inositolphosphotransferase (PI (1-16:1, 2-16:1) MIPC-B (C26)) 0 0 0 0 -r_3390 inositolphosphotransferase (PI (1-18:0, 2-16:1) MIPC-B (C26)) 0 0 0 0 -r_3391 inositolphosphotransferase (PI (1-18:1, 2-16:1) MIPC-B (C26)) 0 0 0 0 -r_3392 inositolphosphotransferase (PI (1-16:0, 2-18:1) MIPC-B (C26)) 0 0 0 0 -r_3393 inositolphosphotransferase (PI (1-16:1, 2-18:1) MIPC-B (C26)) 0 0 0 0 -r_3394 inositolphosphotransferase (PI (1-18:0, 2-18:1) MIPC-B (C26)) 0 0 0 0 -r_3395 inositolphosphotransferase (PI (1-18:1, 2-18:1) MIPC-B (C26)) 0 0 0 0 -r_3396 inositolphosphotransferase (PI (1-16:0, 2-16:1) MIPC-C (C24)) 0 0 0 0 -r_3397 inositolphosphotransferase (PI (1-16:1, 2-16:1) MIPC-C (C24)) 0 0 0 0 -r_3398 inositolphosphotransferase (PI (1-18:0, 2-16:1) MIPC-C (C24)) 0 0 0 0 -r_3399 inositolphosphotransferase (PI (1-18:1, 2-16:1) MIPC-C (C24)) 0 0 0 0 -r_3400 inositolphosphotransferase (PI (1-16:0, 2-18:1) MIPC-C (C24)) 0 0 0 0 -r_3401 inositolphosphotransferase (PI (1-16:1, 2-18:1) MIPC-C (C24)) 0 0 0 0 -r_3402 inositolphosphotransferase (PI (1-18:0, 2-18:1) MIPC-C (C24)) 0 0 0 0 -r_3403 inositolphosphotransferase (PI (1-18:1, 2-18:1) MIPC-C (C24)) 0 0 0 0 -r_3404 inositolphosphotransferase (PI (1-16:0, 2-16:1) MIPC-C (C26)) 0 0 0 0 -r_3405 inositolphosphotransferase (PI (1-16:1, 2-16:1) MIPC-C (C26)) 0 0 0 0 -r_3406 inositolphosphotransferase (PI (1-18:0, 2-16:1) MIPC-C (C26)) 0 0 0 0 -r_3407 inositolphosphotransferase (PI (1-18:1, 2-16:1) MIPC-C (C26)) 0 0 0 0 -r_3408 inositolphosphotransferase (PI (1-16:0, 2-18:1) MIPC-C (C26)) 0 0 0 0 -r_3409 inositolphosphotransferase (PI (1-16:1, 2-18:1) MIPC-C (C26)) 0 0 0 0 -r_3410 inositolphosphotransferase (PI (1-18:0, 2-18:1) MIPC-C (C26)) 0 0 0 0 -r_3411 inositolphosphotransferase (PI (1-18:1, 2-18:1) MIPC-C (C26)) 0 0 0 0 -r_3412 inositolphosphotransferase (PI (1-16:0, 2-16:1) MIPC-D (C24)) 0 0 0 0 -r_3413 inositolphosphotransferase (PI (1-16:1, 2-16:1) MIPC-D (C24)) 0 0 0 0 -r_3414 inositolphosphotransferase (PI (1-18:0, 2-16:1) MIPC-D (C24)) 0 0 0 0 -r_3415 inositolphosphotransferase (PI (1-18:1, 2-16:1) MIPC-D (C24)) 0 0 0 0 -r_3416 inositolphosphotransferase (PI (1-16:0, 2-18:1) MIPC-D (C24)) 0 0 0 0 -r_3417 inositolphosphotransferase (PI (1-16:1, 2-18:1) MIPC-D (C24)) 0 0 0 0 -r_3418 inositolphosphotransferase (PI (1-18:0, 2-18:1) MIPC-D (C24)) 0 0 0 0 -r_3419 inositolphosphotransferase (PI (1-18:1, 2-18:1) MIPC-D (C24)) 0 0 0 0 -r_3420 inositolphosphotransferase (PI (1-16:0, 2-16:1) MIPC-D (C26)) 0 0 0 0 -r_3421 inositolphosphotransferase (PI (1-16:1, 2-16:1) MIPC-D (C26)) 0 0 0 0 -r_3422 inositolphosphotransferase (PI (1-18:0, 2-16:1) MIPC-D (C26)) 0 0 0 0 -r_3423 inositolphosphotransferase (PI (1-18:1, 2-16:1) MIPC-D (C26)) 0 0 0 0 -r_3424 inositolphosphotransferase (PI (1-16:0, 2-18:1) MIPC-D (C26)) 0 0 0 0 -r_3425 inositolphosphotransferase (PI (1-16:1, 2-18:1) MIPC-D (C26)) 0 0 0 0 -r_3426 inositolphosphotransferase (PI (1-18:0, 2-18:1) MIPC-D (C26)) 0 0 0 0 -r_3427 inositolphosphotransferase (PI (1-18:1, 2-18:1) MIPC-D (C26)) 0 0 0 0 -r_3428 IPC synthase (PI (1-16:0, 2-16:1) ceramide-1 (C24)) 0 0.109172 0 0.000819621 -r_3429 IPC synthase (PI (1-16:1, 2-16:1) ceramide-1 (C24)) 0 0.109182 0 0.000819621 -r_3430 IPC synthase (PI (1-18:0, 2-16:1) ceramide-1 (C24)) 0 0.10905 0 0.000819621 -r_3431 IPC synthase (PI (1-18:1, 2-16:1) ceramide-1 (C24)) 0 0.10904 0 0.000819621 -r_3432 IPC synthase (PI (1-16:0, 2-18:1) ceramide-1 (C24)) 0 0.109033 0 0.000819621 -r_3433 IPC synthase (PI (1-16:1, 2-18:1) ceramide-1 (C24)) 0 0.10904 0 0.000819621 -r_3434 IPC synthase (PI (1-18:0, 2-18:1) ceramide-1 (C24)) 0 0.108942 0 0.000819621 -r_3435 IPC synthase (PI (1-18:1, 2-18:1) ceramide-1 (C24)) 0 0.108905 0 0.000819621 -r_3436 IPC synthase (PI (1-16:0, 2-16:1) ceramide-1 (C26)) 0 0.109172 0 0.000819621 -r_3437 IPC synthase (PI (1-16:1, 2-16:1) ceramide-1 (C26)) 0 0.109182 0 0.000819621 -r_3438 IPC synthase (PI (1-18:0, 2-16:1) ceramide-1 (C26)) 0 0.10905 0 0.000819621 -r_3439 IPC synthase (PI (1-18:1, 2-16:1) ceramide-1 (C26)) 0 0.10904 0 0.000819621 -r_3440 IPC synthase (PI (1-16:0, 2-18:1) ceramide-1 (C26)) 0 0.109033 0 0.000819621 -r_3441 IPC synthase (PI (1-16:1, 2-18:1) ceramide-1 (C26)) 0 0.10904 0 0.000819621 -r_3442 IPC synthase (PI (1-18:0, 2-18:1) ceramide-1 (C26)) 0 0.108942 0 0.000819621 -r_3443 IPC synthase (PI (1-18:1, 2-18:1) ceramide-1 (C26)) 0 0.108905 0 0.000819621 -r_3444 IPC synthase (PI (1-16:0, 2-16:1) ceramide-2' (C24)) 0 0.109172 0 0.000819621 -r_3445 IPC synthase (PI (1-16:1, 2-16:1) ceramide-2' (C24)) 0 0.109182 0 0.000819621 -r_3446 IPC synthase (PI (1-18:0, 2-16:1) ceramide-2' (C24)) 0 0.10905 0 0.000819621 -r_3447 IPC synthase (PI (1-18:1, 2-16:1) ceramide-2' (C24)) 0 0.10904 0 0.000819621 -r_3448 IPC synthase (PI (1-16:0, 2-18:1) ceramide-2' (C24)) 0 0.109033 0 0.000819621 -r_3449 IPC synthase (PI (1-16:1, 2-18:1) ceramide-2' (C24)) 0 0.10904 0 0.000819621 -r_3450 IPC synthase (PI (1-18:0, 2-18:1) ceramide-2' (C24)) 0 0.108942 0 0.000819621 -r_3451 IPC synthase (PI (1-18:1, 2-18:1) ceramide-2' (C24)) 0 0.108905 0 0.000819621 -r_3452 IPC synthase (PI (1-16:0, 2-16:1) ceramide-2' (C26)) 0 0.109172 0 0.000819621 -r_3453 IPC synthase (PI (1-16:1, 2-16:1) ceramide-2' (C26)) 0 0.109182 0 0.000819621 -r_3454 IPC synthase (PI (1-18:0, 2-16:1) ceramide-2' (C26)) 0 0.10905 0 0.000819621 -r_3455 IPC synthase (PI (1-18:1, 2-16:1) ceramide-2' (C26)) 0 0.10904 0 0.000819621 -r_3456 IPC synthase (PI (1-16:0, 2-18:1) ceramide-2' (C26)) 0 0.109033 0 0.000819621 -r_3457 IPC synthase (PI (1-16:1, 2-18:1) ceramide-2' (C26)) 0 0.10904 0 0.000819621 -r_3458 IPC synthase (PI (1-18:0, 2-18:1) ceramide-2' (C26)) 0 0.108942 0 0.000819621 -r_3459 IPC synthase (PI (1-18:1, 2-18:1) ceramide-2' (C26)) 0 0.108905 0 0.000819621 -r_3460 IPC synthase (PI (1-16:0, 2-16:1) ceramide-2 (C24)) 0 0.109172 0 0.000819621 -r_3461 IPC synthase (PI (1-16:1, 2-16:1) ceramide-2 (C24)) 0 0.109182 0 0.000819621 -r_3462 IPC synthase (PI (1-18:0, 2-16:1) ceramide-2 (C24)) 0 0.10905 0 0.000819621 -r_3463 IPC synthase (PI (1-18:1, 2-16:1) ceramide-2 (C24)) 0 0.10904 0 0.000819621 -r_3464 IPC synthase (PI (1-16:0, 2-18:1) ceramide-2 (C24)) 0 0.109033 0 0.000819621 -r_3465 IPC synthase (PI (1-16:1, 2-18:1) ceramide-2 (C24)) 0 0.10904 0 0.000819621 -r_3466 IPC synthase (PI (1-18:0, 2-18:1) ceramide-2 (C24)) 0 0.108942 0 0.000819621 -r_3467 IPC synthase (PI (1-18:1, 2-18:1) ceramide-2 (C24)) 0 0.108905 0 0.000819621 -r_3468 IPC synthase (PI (1-16:0, 2-16:1) ceramide-2 (C26)) 0 0.109172 0 0.000819621 -r_3469 IPC synthase (PI (1-16:1, 2-16:1) ceramide-2 (C26)) 0 0.109182 0 0.000819621 -r_3470 IPC synthase (PI (1-18:0, 2-16:1) ceramide-2 (C26)) 0 0.10905 0 0.000819621 -r_3471 IPC synthase (PI (1-18:1, 2-16:1) ceramide-2 (C26)) 0 0.10904 0 0.000819621 -r_3472 IPC synthase (PI (1-16:0, 2-18:1) ceramide-2 (C26)) 0 0.109033 0 0.000819621 -r_3473 IPC synthase (PI (1-16:1, 2-18:1) ceramide-2 (C26)) 0 0.10904 0 0.000819621 -r_3474 IPC synthase (PI (1-18:0, 2-18:1) ceramide-2 (C26)) 0 0.108942 0 0.000819621 -r_3475 IPC synthase (PI (1-18:1, 2-18:1) ceramide-2 (C26)) 0 0.108905 0 0.000819621 -r_3476 IPC synthase (PI (1-16:0, 2-16:1) ceramide-3 (C24)) 0 0.109172 0 0.000819621 -r_3477 IPC synthase (PI (1-16:1, 2-16:1) ceramide-3 (C24)) -6.43966e-12 0.109182 0 0.000819621 -r_3478 IPC synthase (PI (1-18:0, 2-16:1) ceramide-3 (C24)) 0 0.10905 0 0.000819621 -r_3479 IPC synthase (PI (1-18:1, 2-16:1) ceramide-3 (C24)) 0 0.10904 0 0.000819621 -r_3480 IPC synthase (PI (1-16:0, 2-18:1) ceramide-3 (C24)) 0 0.109033 0 0.000819621 -r_3481 IPC synthase (PI (1-16:1, 2-18:1) ceramide-3 (C24)) 0 0.10904 0 0.000819621 -r_3482 IPC synthase (PI (1-18:0, 2-18:1) ceramide-3 (C24)) 0 0.108942 0 0.000819621 -r_3483 IPC synthase (PI (1-18:1, 2-18:1) ceramide-3 (C24)) 0 0.108905 0 0.000819621 -r_3484 IPC synthase (PI (1-16:0, 2-16:1) ceramide-3 (C26)) 0 0.109172 0 0.000819621 -r_3485 IPC synthase (PI (1-16:1, 2-16:1) ceramide-3 (C26)) 0 0.109182 0 0.000819621 -r_3486 IPC synthase (PI (1-18:0, 2-16:1) ceramide-3 (C26)) 0 0.10905 0 0.000819621 -r_3487 IPC synthase (PI (1-18:1, 2-16:1) ceramide-3 (C26)) 0 0.10904 0 0.000819621 -r_3488 IPC synthase (PI (1-16:0, 2-18:1) ceramide-3 (C26)) 0 0.109033 0 0.000819621 -r_3489 IPC synthase (PI (1-16:1, 2-18:1) ceramide-3 (C26)) 0 0.10904 0 0.000819621 -r_3490 IPC synthase (PI (1-18:0, 2-18:1) ceramide-3 (C26)) 0 0.108942 0 0.000819621 -r_3491 IPC synthase (PI (1-18:1, 2-18:1) ceramide-3 (C26)) 0 0.108905 0 0.000819621 -r_3492 IPC synthase (PI (1-16:0, 2-16:1) ceramide-4 (C24)) 0 0.109172 0 0.000819621 -r_3493 IPC synthase (PI (1-16:1, 2-16:1) ceramide-4 (C24)) 0 0.109182 0 0.000819621 -r_3494 IPC synthase (PI (1-18:0, 2-16:1) ceramide-4 (C24)) 0 0.10905 0 0.000819621 -r_3495 IPC synthase (PI (1-18:1, 2-16:1) ceramide-4 (C24)) 0 0.10904 0 0.000819621 -r_3496 IPC synthase (PI (1-16:0, 2-18:1) ceramide-4 (C24)) 0 0.109033 0 0.000819621 -r_3497 IPC synthase (PI (1-16:1, 2-18:1) ceramide-4 (C24)) 0 0.10904 0 0.000819621 -r_3498 IPC synthase (PI (1-18:0, 2-18:1) ceramide-4 (C24)) 0 0.108942 0 0.000819621 -r_3499 IPC synthase (PI (1-18:1, 2-18:1) ceramide-4 (C24)) 0 0.108905 0 0.000819621 -r_3500 IPC synthase (PI (1-16:0, 2-16:1) ceramide-4 (C26)) 0 0.109172 0 0.000819621 -r_3501 IPC synthase (PI (1-16:1, 2-16:1) ceramide-4 (C26)) 0 0.109182 0 0.000819621 -r_3502 IPC synthase (PI (1-18:0, 2-16:1) ceramide-4 (C26)) 0 0.10905 0 0.000819621 -r_3503 IPC synthase (PI (1-18:1, 2-16:1) ceramide-4 (C26)) 0 0.10904 0 0.000819621 -r_3504 IPC synthase (PI (1-16:0, 2-18:1) ceramide-4 (C26)) 0 0.109033 0 0.000819621 -r_3505 IPC synthase (PI (1-16:1, 2-18:1) ceramide-4 (C26)) 0 0.10904 0 0.000819621 -r_3506 IPC synthase (PI (1-18:0, 2-18:1) ceramide-4 (C26)) 0 0.108942 0 0.000819621 -r_3507 IPC synthase (PI (1-18:1, 2-18:1) ceramide-4 (C26)) 0 0.108905 0 0.000819621 -r_3508 laurate transport, cytoplasm-ER membrane 0 0.1089 0 0 -r_3509 myristate transport, cytoplasm-ER membrane -0.0738428 0.1089 0 -0.000200293 -r_3510 palmitate transport, cytoplasm-ER membrane -1000 1000 0 0 -r_3511 palmitoleate transport, cytoplasm-ER membrane -1000 1000 0 0 -r_3512 stearate transport, cytoplasm-ER membrane -1000 1000 0 -1.0875e-05 -r_3513 oleate transport, cytoplasm-ER membrane -1000 1000 0 0 -r_3514 malonyl-CoA transport, cytoplasm-ER membrane 0 0.0772564 0 0 -r_3515 lauroyl-CoA transport, cytoplasm-ER membrane -1000 1000 0 0 -r_3516 myristoyl-CoA transport, cytoplasm-ER membrane -1000 1000 0 -0.000188256 -r_3517 palmitoyl-CoA transport, cytoplasm-ER membrane -1000 1000 0.00897905 0.00830205 -r_3518 palmitoleoyl-CoA transport, cytoplasm-ER membrane -1000 1000 0 0 -r_3519 stearoyl-CoA transport, cytoplasm-ER membrane -1000 1000 0.0017246 0.0017246 -r_3520 oleoyl-CoA transport, cytoplasm-ER membrane -1000 1000 0 0 -r_3521 icosanoyl-CoA transport, cytoplasm-ER membrane -0.0440043 0 0 -0.00530899 -r_3522 docosanoyl-CoA transport, cytoplasm-ER membrane -0.027573 0 0 -0.00399729 -r_3523 tetracosanoyl-CoA transport, cytoplasm-ER membrane -1000 1000 0 0.0666067 -r_3524 hexacosanoyl-CoA transport, cytoplasm-ER membrane -1000 1000 0 0.0665217 -r_3525 H+ transport, cytoplasm-ER membrane -0.585749 0.303679 0 0 -r_3526 H2O transport, cytoplasm-ER membrane -0.124277 0.269311 0 0.103544 -r_3527 CO2 transport, cytoplasm-ER membrane -0.0772564 0 0 0 -r_3528 coenzyme A transport, cytoplasm-ER membrane -1000 999.994 0 -0.00873086 -r_3529 NADPH transport, cytoplasm-ER membrane 0 0.159588 0 0 -r_3530 NADP(+) transport, cytoplasm-ER membrane -0.159588 0 0 0 -r_3531 O2 transport, cytoplasm-ER membrane 0.0109206 0.0307251 0.0109206 0.0109206 -r_3532 NADH transport, cytoplasm-ER membrane 0.0206563 0.0404607 0.0206563 0.0206563 -r_3533 NAD transport, cytoplasm-ER membrane -0.0307251 -0.0109206 -0.0109206 -0.0109206 -r_3534 glycerol 3-phosphate transport, cytoplasm-ER membrane 0 0.0790193 0 0.00333835 -r_3535 dihydroxyacetone phosphate transport, cytoplasm-ER membrane 0 0.0729409 0 0 -r_3536 diphosphate transport, cytoplasm-ER membrane -1000 999.994 -8.9951e-05 0 -r_3537 phosphate transport, cytoplasm-ER membrane -0.291152 0 0 0 -r_3538 CTP transport, cytoplasm-ER membrane 0.00533863 0.295758 0.00535425 0.00534621 -r_3539 CDP transport, cytoplasm-ER membrane -0.290399 0 0 0 -r_3540 CMP transport, cytoplasm-ER membrane -0.139563 -0.00533863 -0.00538145 -0.00534621 -r_3541 CDP-ethanolamine transport, cytoplasm-ER membrane 0 0 0 0 -r_3542 CDP-choline transport, cytoplasm-ER membrane 0 0.1089 0 0 -r_3543 ATP transport, cytoplasm-ER membrane -999.999 999.995 0 0 -r_3544 AMP transport, cytoplasm-ER membrane -999.995 999.999 0 0 -r_3545 L-serine transport, cytoplasm-ER membrane 0.0045851 0.0202091 0.00459268 0.00472498 -r_3546 myo-inositol transport, cytoplasm-ER membrane 0.000702907 0.109936 0.000702965 0.000702907 -r_3547 S-adenosyl-L-methionine transport, cytoplasm-ER membrane 0.00895368 0.0558699 0.00899667 0.00899667 -r_3548 S-adenosyl-L-homocysteine transport, cytoplasm-ER membrane -0.0558699 -0.00895368 -0.00899667 -0.00899667 -r_3549 episterol transport, cytoplasm-ER membrane 0 0 0 0 -r_3550 fecosterol transport, cytoplasm-ER membrane 0 0 0 0 -r_3551 lanosterol transport, cytoplasm-ER membrane 0 0 0 0 -r_3552 ergosterol transport, cytoplasm-ER membrane -999.999 1000 0 0 -r_3553 zymosterol transport, cytoplasm-ER membrane 0 0.17424 0 0 -r_3554 diglyceride (1-16:0, 2-16:1) transport, cytoplasm-ER membrane -0.174993 0.17424 0 0 -r_3555 diglyceride (1-16:1, 2-16:1) transport, cytoplasm-ER membrane -0.174993 0.17424 0 -0.000656328 -r_3556 diglyceride (1-18:0, 2-16:1) transport, cytoplasm-ER membrane -0.174993 0.17424 0 0.000509938 -r_3557 diglyceride (1-18:1, 2-16:1) transport, cytoplasm-ER membrane -0.174993 0.17424 0 -0.000214622 -r_3558 diglyceride (1-16:0, 2-18:1) transport, cytoplasm-ER membrane -0.174993 0.17424 0 0.000149261 -r_3559 diglyceride (1-16:1, 2-18:1) transport, cytoplasm-ER membrane -0.174993 0.17424 0 -0.000335728 -r_3560 diglyceride (1-18:0, 2-18:1) transport, cytoplasm-ER membrane -0.174993 0.17424 0 -0.000211023 -r_3561 diglyceride (1-18:1, 2-18:1) transport, cytoplasm-ER membrane -0.174993 0.17424 0 -3.60469e-06 -r_3562 1-phosphatidyl-1D-myo-inositol (1-16:0, 2-16:1) transport, cytoplasm-ER membrane -0.000771502 0.290399 0 0 -r_3563 1-phosphatidyl-1D-myo-inositol (1-16:1, 2-16:1) transport, cytoplasm-ER membrane -0.00077343 0.290386 0 0 -r_3564 1-phosphatidyl-1D-myo-inositol (1-18:0, 2-16:1) transport, cytoplasm-ER membrane -0.000719566 0.290399 0 0 -r_3565 1-phosphatidyl-1D-myo-inositol (1-18:1, 2-16:1) transport, cytoplasm-ER membrane -0.000747431 0.290399 0 -1.23983e-05 -r_3566 1-phosphatidyl-1D-myo-inositol (1-16:0, 2-18:1) transport, cytoplasm-ER membrane -0.00074563 0.290399 0 0 -r_3567 1-phosphatidyl-1D-myo-inositol (1-16:1, 2-18:1) transport, cytoplasm-ER membrane -0.000747431 0.290399 0 -1.92222e-06 -r_3568 1-phosphatidyl-1D-myo-inositol (1-18:0, 2-18:1) transport, cytoplasm-ER membrane -0.000719542 0.290399 0 0 -r_3569 1-phosphatidyl-1D-myo-inositol (1-18:1, 2-18:1) transport, cytoplasm-ER membrane -0.00072312 0.290399 0 -1.85974e-06 -r_3570 sn-glycero-3-phosphocholine transport, ER membrane-cytoplasm 0 0.0486091 0 0 -r_3571 hexadecanoate (n-C16:0) transport, cytoplasm-lipid particle -1000 1000 0 0 -r_3572 hexadecenoate (n-C16:1) transport, cytoplasm-lipid particle -1000 1000 0 0 -r_3573 octadecanoate (n-C18:0) transport, cytoplasm-lipid particle -1000 1000 0 0 -r_3574 octadecenoate (n-C18:1) transport, cytoplasm-lipid particle -1000 1000 0 0 -r_3575 lauroyl-CoA transport, cytoplasm-lipid particle -1000 1000 0 0 -r_3576 myristoyl-CoA transport, cytoplasm-lipid particle -1000 1000 0 0.000194146 -r_3577 palmitoyl-CoA transport, cytoplasm-lipid particle -1000 1000 0 0 -r_3578 palmitoleoyl-CoA transport, cytoplasm-lipid particle -1000 1000 0 0 -r_3579 stearoyl-CoA transport, cytoplasm-lipid particle -1000 1000 0 0 -r_3580 oleoyl-CoA transport, cytoplasm-lipid particle -1000 1000 0 0 -r_3581 glycerol 3-phosphate transport, cytoplasm-lipid particle 0 0.0768498 0 0 -r_3582 dihydroxyacetone phosphate transport, cytoplasm-lipid particle 0 0.0709383 0 0 -r_3583 NADPH transport, cytoplasm-lipid particle 0 0.0709383 0 0 -r_3584 NADP(+) transport, cytoplasm-lipid particle -0.0709383 0 0 0 -r_3585 ATP transport, cytoplasm-lipid particle -1000 1000 0 1.13687e-13 -r_3586 AMP transport, cytoplasm-lipid particle -1000 1000 0 0 -r_3587 diphosphate transport, cytoplasm-lipid particle -1000 1000 0 -1.13687e-13 -r_3588 diglyceride (1-16:0, 2-16:1) transport, cytoplasm-lipid particle -0.17424 0.174993 0 -7.38163e-06 -r_3589 diglyceride (1-16:1, 2-16:1) transport, cytoplasm-lipid particle -0.17424 0.174993 0 -7.38163e-06 -r_3590 diglyceride (1-18:0, 2-16:1) transport, cytoplasm-lipid particle -0.17424 0.174993 0 0 -r_3591 diglyceride (1-18:1, 2-16:1) transport, cytoplasm-lipid particle -0.17424 0.174993 0 0.000214622 -r_3592 diglyceride (1-16:0, 2-18:1) transport, cytoplasm-lipid particle -0.17424 0.174993 0 -0.000149261 -r_3593 diglyceride (1-16:1, 2-18:1) transport, cytoplasm-lipid particle -0.17424 0.174993 0 -0.000255636 -r_3594 diglyceride (1-18:0, 2-18:1) transport, cytoplasm-lipid particle -0.17424 0.174993 0 0.000211023 -r_3595 diglyceride (1-18:1, 2-18:1) transport, cytoplasm-lipid particle -0.17424 0.174993 0 3.60469e-06 -r_3596 H2O transport, cytoplasm-lipid particle 0 0.17424 0 0 -r_3597 glycerol transport, lipid particle-cytoplasm 0 0.0729075 0 0 -r_3598 docosanoyl-CoA transport, lipid particle-cytoplasm 0 0 0 0 -r_3599 tetracosanoyl-CoA transport, lipid particle-cytoplasm -1000 1000 0 -0.0666067 -r_3600 hexacosanoyl-CoA transport, lipid particle-cytoplasm -1000 1000 0 -0.0665217 -r_3601 ATP transport, cytoplasm-cell envelope 0 0.290399 0 0.107696 -r_3602 ADP transport, cytoplasm-cell envelope -0.290399 0 0 0 -r_3603 H+ transport, cytoplasm-cell envelope -0.580799 0.290399 0 1.11774e-05 -r_3604 H2O transport, cytoplasm-cell envelope 0 0.290399 0 -39.1752 -r_3605 phosphate transport, cytoplasm-cell envelope -0.290399 0 0 -0.323087 -r_3606 sn-glycero-3-phosphocholine transport, cell envelope-cytoplasm 0 0.0483999 0 0.00281356 -r_3607 1-(sn-glycero-3-phospho)-1D-myo-inositol transport, cell envelope-cytoplasm 0 0.0141618 0 0.000819621 -r_3608 palmitate transport, cell envelope-cytoplasm 0 0.0483999 0 0 -r_3609 palmitoleate transport, cell envelope-cytoplasm 0 0.17424 0 -1.13687e-13 -r_3610 stearate transport, cell envelope-cytoplasm 0 0.0483999 0 0 -r_3611 oleate transport, cell envelope-cytoplasm 0 0.17424 0 -1.13687e-13 -r_3612 icosanoyl-CoA transport, cell envelope-cytoplasm 0 0 0 0 -r_3613 docosanoyl-CoA transport, cell envelope-cytoplasm 0 0 0 0 -r_3614 tetracosanoyl-CoA transport, cell envelope-cytoplasm -1000 1000 0 0.0666067 -r_3615 hexacosanoyl-CoA transport, cell envelope-cytoplasm -1000 1000 0 0.0665217 -r_3616 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-16:0, 2-16:1) transport, cell envelope-cytoplasm -0.1452 0.290399 0 -0.000718124 -r_3617 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-16:1, 2-16:1) transport, cell envelope-cytoplasm -0.1452 0.290399 0 0.107696 -r_3618 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-18:0, 2-16:1) transport, cell envelope-cytoplasm -0.1452 0.290399 0 0.107696 -r_3619 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-18:1, 2-16:1) transport, cell envelope-cytoplasm -0.1452 0.290399 0 -0.000718124 -r_3620 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-16:0, 2-18:1) transport, cell envelope-cytoplasm -0.1452 0.290399 0 -0.000718124 -r_3621 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-16:1, 2-18:1) transport, cell envelope-cytoplasm -0.1452 0.290399 0 -0.000718124 -r_3622 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-18:0, 2-18:1) transport, cell envelope-cytoplasm -0.1452 0.290399 0 -0.000718124 -r_3623 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-18:1, 2-18:1) transport, cell envelope-cytoplasm -0.1452 0.290399 0 0.107696 -r_3624 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-16:0, 2-16:1) transport, cell envelope-cytoplasm -0.290399 0.290399 0 0.0858544 -r_3625 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-16:1, 2-16:1) transport, cell envelope-cytoplasm -0.290399 0.290399 0 0.107682 -r_3626 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-18:0, 2-16:1) transport, cell envelope-cytoplasm -0.290399 0.290399 0 0.107696 -r_3627 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-18:1, 2-16:1) transport, cell envelope-cytoplasm -0.290399 0.290399 0 -0.107696 -r_3628 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-16:0, 2-18:1) transport, cell envelope-cytoplasm -0.290399 0.290399 0 -0.107696 -r_3629 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-16:1, 2-18:1) transport, cell envelope-cytoplasm -0.290399 0.290399 0 0.107696 -r_3630 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-18:0, 2-18:1) transport, cell envelope-cytoplasm -0.290399 0.290399 0 -0.107696 -r_3631 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-18:1, 2-18:1) transport, cell envelope-cytoplasm -0.290399 0.290399 0 -0.107696 -r_3632 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-16:0, 2-16:1) transport, nucleus-cytoplasm 0 0.1452 0 0.000718124 -r_3633 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-16:1, 2-16:1) transport, nucleus-cytoplasm 0 0.1452 0 0.000718124 -r_3634 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-18:0, 2-16:1) transport, nucleus-cytoplasm 0 0.1452 0 0.000718124 -r_3635 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-18:1, 2-16:1) transport, nucleus-cytoplasm 0 0.1452 0 0.000718124 -r_3636 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-16:0, 2-18:1) transport, nucleus-cytoplasm 0 0.1452 0 0.000718124 -r_3637 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-16:1, 2-18:1) transport, nucleus-cytoplasm 0 0.1452 0 0.000718124 -r_3638 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-18:0, 2-18:1) transport, nucleus-cytoplasm 0 0.1452 0 0.000718124 -r_3639 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-18:1, 2-18:1) transport, nucleus-cytoplasm 0 0.1452 0 0.000718124 -r_3640 diglyceride (1-16:0, 2-16:1) transport, nucleus-cytoplasm 0 0 0 0 -r_3641 diglyceride (1-16:1, 2-16:1) transport, nucleus-cytoplasm 0 0 0 0 -r_3642 diglyceride (1-18:0, 2-16:1) transport, nucleus-cytoplasm 0 0 0 0 -r_3643 diglyceride (1-18:1, 2-16:1) transport, nucleus-cytoplasm 0 0 0 0 -r_3644 diglyceride (1-16:0, 2-18:1) transport, nucleus-cytoplasm 0 0 0 0 -r_3645 diglyceride (1-16:1, 2-18:1) transport, nucleus-cytoplasm 0 0 0 0 -r_3646 diglyceride (1-18:0, 2-18:1) transport, nucleus-cytoplasm 0 0 0 0 -r_3647 diglyceride (1-18:1, 2-18:1) transport, nucleus-cytoplasm 0 0 0 0 -r_3648 H2O transport, cytoplasm-vacuolar membrane 0 0.290399 0 0 -r_3649 phosphate transport, cytoplasm-vacuolar membrane -0.290399 0 0 -0.107696 -r_3650 H+ transport, cytoplasm-vacuolar membrane -0.290399 0.290399 0 0.000117142 -r_3651 ATP transport, cytoplasm-vacuolar membrane 0 0.290399 0 0.000117142 -r_3652 ADP transport, cytoplasm-vacuolar membrane -0.290399 0 0 -0.000117142 -r_3653 carbon dioxide transport, cytoplasm-vacuolar membrane -0.0195047 0 0 0 -r_3654 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-16:0, 2-16:1) transport, vacuolar membrane-cytoplasm 0 0.1452 0 0 -r_3655 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-16:1, 2-16:1) transport, vacuolar membrane-cytoplasm 0 0.1452 0 0 -r_3656 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-18:0, 2-16:1) transport, vacuolar membrane-cytoplasm 0 0.1452 0 0 -r_3657 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-18:1, 2-16:1) transport, vacuolar membrane-cytoplasm 0 0.1452 0 0 -r_3658 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-16:0, 2-18:1) transport, vacuolar membrane-cytoplasm 0 0.1452 0 0 -r_3659 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-16:1, 2-18:1) transport, vacuolar membrane-cytoplasm 0 0.1452 0 0 -r_3660 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-18:0, 2-18:1) transport, vacuolar membrane-cytoplasm 0 0.1452 0 0 -r_3661 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-18:1, 2-18:1) transport, vacuolar membrane-cytoplasm 0 0.1452 0 0 -r_3662 H2O transport, cytoplasm-Golgi membrane 0 0.291152 0.00012129 0 -r_3663 phosphate transport, cytoplasm-Golgi membrane -0.291152 9.66338e-12 0 0 -r_3664 H+ transport, cytoplasm-Golgi membrane -0.582305 1.93268e-11 0 0 -r_3665 carbon dioxide transport, cytoplasm-Golgi membrane -0.0195047 0 0 0 -r_3666 ATP transport, cytoplasm-Golgi membrane 0 0.290399 0 0.000718124 -r_3667 ADP transport, cytoplasm-Golgi membrane -0.290399 0 0 -0.107696 -r_3668 H2O transport, cytoplasm-mitochondrial membrane 0 0.15881 0 0 -r_3669 carbon dioxide transport, cytoplasm-mitochondrial membrane -0.0195047 0 0 -0.0021239 -r_3670 palmitoleoyl-CoA transport, cytoplasm-mitochondrial membrane 0 0 0 0 -r_3671 oleoyl-CoA transport, cytoplasm-mitochondrial membrane 0 0 0 0 -r_3672 diglyceride (1-16:0, 2-16:1) transport, mitochondrial membrane-cytoplasm 0 0.0793977 0 0 -r_3673 diglyceride (1-16:1, 2-16:1) transport, mitochondrial membrane-cytoplasm 0 0.0794052 0 0 -r_3674 diglyceride (1-18:0, 2-16:1) transport, mitochondrial membrane-cytoplasm 0 0.0793094 0 0 -r_3675 diglyceride (1-18:1, 2-16:1) transport, mitochondrial membrane-cytoplasm 0 0.0793018 0 0 -r_3676 diglyceride (1-16:0, 2-18:1) transport, mitochondrial membrane-cytoplasm 0 0.0792968 0 0 -r_3677 diglyceride (1-16:1, 2-18:1) transport, mitochondrial membrane-cytoplasm 0 0.0793018 0 0 -r_3678 palmitate transport, mitochondrial membrane-cytoplasm -8.29914e-12 0 0 0 -r_3679 stearate transport, mitochondrial membrane-cytoplasm 0 0 0 0 -r_3680 coenzyme A transport, mitochondrial membrane-cytoplasm 0 0 0 0 -r_3681 laurate transport, ER membrane-lipid particle -1000 1000 0 0 -r_3682 myristate transport, ER membrane-lipid particle -1000 1000 0 0 -r_3683 lignoceric acid transport, ER membrane-lipid particle -1000 1000 0 0.0665217 -r_3684 cerotic acid transport, ER membrane-lipid particle -1000 1000 0 0.0646174 -r_3685 TAG (1-16:0, 2-16:1, 3-16:0) transport, ER membrane-lipid particle -0.000769091 0.17424 0 0 -r_3686 TAG (1-16:0, 2-16:1, 3-16:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 0 -r_3687 TAG (1-16:0, 2-16:1, 3-18:0) transport, ER membrane-lipid particle -0.000719527 0.17424 0 0 -r_3688 TAG (1-16:0, 2-16:1, 3-18:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 0.000645373 -r_3689 TAG (1-16:1, 2-16:1, 3-16:0) transport, ER membrane-lipid particle -0.000771023 0.17424 0 0.000309645 -r_3690 TAG (1-16:1, 2-16:1, 3-16:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 9.48508e-05 -r_3691 TAG (1-16:1, 2-16:1, 3-18:0) transport, ER membrane-lipid particle -0.00071953 0.17424 0 7.38163e-06 -r_3692 TAG (1-16:1, 2-16:1, 3-18:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 0 -r_3693 TAG (1-18:0, 2-16:1, 3-16:0) transport, ER membrane-lipid particle -0.000719527 0.17424 0 -0.000701047 -r_3694 TAG (1-18:0, 2-16:1, 3-16:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 0 -r_3695 TAG (1-18:0, 2-16:1, 3-18:0) transport, ER membrane-lipid particle -0.000359765 0.17424 0 -0.000211023 -r_3696 TAG (1-18:0, 2-16:1, 3-18:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 0.000256824 -r_3697 TAG (1-18:1, 2-16:1, 3-16:0) transport, ER membrane-lipid particle -0.000744963 0.17424 0 -0.000725831 -r_3698 TAG (1-18:1, 2-16:1, 3-16:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 -0.000753069 -r_3699 TAG (1-18:1, 2-16:1, 3-18:0) transport, ER membrane-lipid particle -0.00071948 0.17424 0 -0.000436796 -r_3700 TAG (1-18:1, 2-16:1, 3-18:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 0.00015091 -r_3701 TAG (1-16:0, 2-18:1, 3-16:0) transport, ER membrane-lipid particle -0.000743158 0.17424 0 -0.000724075 -r_3702 TAG (1-16:0, 2-18:1, 3-16:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 -0.00430055 -r_3703 TAG (1-16:0, 2-18:1, 3-18:0) transport, ER membrane-lipid particle -0.000718909 0.17424 0 0 -r_3704 TAG (1-16:0, 2-18:1, 3-18:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 -0.00180656 -r_3705 TAG (1-16:1, 2-18:1, 3-16:0) transport, ER membrane-lipid particle -0.000744963 0.17424 0 -0.000725831 -r_3706 TAG (1-16:1, 2-18:1, 3-16:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 0.000513994 -r_3707 TAG (1-16:1, 2-18:1, 3-18:0) transport, ER membrane-lipid particle -0.00071948 0.17424 0 0.000255636 -r_3708 TAG (1-16:1, 2-18:1, 3-18:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 0.000645373 -r_3709 TAG (1-18:0, 2-18:1, 3-16:0) transport, ER membrane-lipid particle -0.000718909 0.17424 0 0 -r_3710 TAG (1-18:0, 2-18:1, 3-16:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 -0.00189017 -r_3711 TAG (1-18:0, 2-18:1, 3-18:0) transport, ER membrane-lipid particle -0.000359753 0.17424 0 -0.000211023 -r_3712 TAG (1-18:0, 2-18:1, 3-18:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 0.00432853 -r_3713 TAG (1-18:1, 2-18:1, 3-16:0) transport, ER membrane-lipid particle -0.000720599 0.17424 0 -0.000702137 -r_3714 TAG (1-18:1, 2-18:1, 3-16:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 0 -r_3715 TAG (1-18:1, 2-18:1, 3-18:0) transport, ER membrane-lipid particle -0.000554626 0.17424 0 -0.000389245 -r_3716 TAG (1-18:1, 2-18:1, 3-18:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 -0.00180656 -r_3717 episterol transport, ER membrane-lipid particle -0.17424 0 0 0 -r_3718 fecosterol transport, ER membrane-lipid particle -0.17424 0 0 0 -r_3719 lanosterol transport, ER membrane-lipid particle -0.17424 0 0 0 -r_3720 zymosterol transport, ER membrane-lipid particle -0.17424 0 0 0 -r_3721 ergosteryl palmitoleate transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3722 ergosteryl oleate transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3723 episteryl palmitoleate transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3724 episteryl oleate transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3725 fecosteryl palmitoleate transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3726 fecosteryl oleate transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3727 lanosteryl palmitoleate transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3728 lanosteryl oleate transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3729 zymosteryl palmitoleate transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3730 zymosteryl oleate transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3731 phosphatidylcholine (1-16:0, 2-16:1) transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3732 phosphatidylcholine (1-16:1, 2-16:1) transport, ER membrane-lipid particle 0 0.17424 0.00532093 0 -r_3733 phosphatidylcholine (1-18:0, 2-16:1) transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3734 phosphatidylcholine (1-18:1, 2-16:1) transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3735 phosphatidylcholine (1-16:0, 2-18:1) transport, ER membrane-lipid particle 0 0.17424 0.000256824 0 -r_3736 phosphatidylcholine (1-16:1, 2-18:1) transport, ER membrane-lipid particle 0 0.17424 0.000645373 0 -r_3737 phosphatidylcholine (1-18:0, 2-18:1) transport, ER membrane-lipid particle 0 0.17424 0.000645373 0 -r_3738 phosphatidylcholine (1-18:1, 2-18:1) transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3739 phosphatidylethanolamine (1-16:0, 2-16:1) transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3740 phosphatidylethanolamine (1-16:1, 2-16:1) transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3741 phosphatidylethanolamine (1-18:0, 2-16:1) transport, ER membrane-lipid particle 0 0.17424 0 0 -r_3742 phosphatidylethanolamine (1-18:1, 2-16:1) transport, ER membrane-lipid particle 0 0.17424 0 0.0059663 -r_3743 phosphatidylethanolamine (1-16:0, 2-18:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 -7.39457e-06 -r_3744 phosphatidylethanolamine (1-16:1, 2-18:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 -2.94228e-06 -r_3745 phosphatidylethanolamine (1-18:0, 2-18:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 0.00535082 -r_3746 phosphatidylethanolamine (1-18:1, 2-18:1) transport, ER membrane-lipid particle -0.174993 0.17424 0 -0.000752719 -r_3747 1-acylglycerophosphocholine (16:0) transport, ER membrane-lipid particle -0.17424 0 0 0 -r_3748 1-acylglycerophosphocholine (16:1) transport, ER membrane-lipid particle -0.17424 0 0 0 -r_3749 1-acylglycerophosphocholine (18:0) transport, ER membrane-lipid particle -0.17424 0 0 0 -r_3750 1-acylglycerophosphocholine (18:1) transport, ER membrane-lipid particle -0.17424 0 0 0 -r_3751 1-acylglycerophosphoethanolamine (16:0) transport, ER membrane-lipid particle -0.17424 0.174993 0 -0.00040449 -r_3752 1-acylglycerophosphoethanolamine (16:1) transport, ER membrane-lipid particle -0.17424 0.174993 0 0 -r_3753 1-acylglycerophosphoethanolamine (18:0) transport, ER membrane-lipid particle -0.17424 0.174993 0 0.000640544 -r_3754 1-acylglycerophosphoethanolamine (18:1) transport, ER membrane-lipid particle -0.17424 0.174993 0 -0.000851655 -r_3755 phosphatidate (1-16:0, 2-18:1) transport, lipid particle-ER membrane 0 0.0752789 0 0 -r_3756 phosphatidate (1-16:1, 2-18:1) transport, lipid particle-ER membrane 0 0.0759071 0 0 -r_3757 phosphatidate (1-18:0, 2-18:1) transport, lipid particle-ER membrane 0 0.0736085 0 0 -r_3758 phosphatidate (1-18:1, 2-18:1) transport, lipid particle-ER membrane 0 0.0737432 0 0 -r_3759 phosphatidate (1-16:0, 2-16:1) transport, ER membrane-mitochondrial membrane 0 0.0793977 0 0.0295694 -r_3760 phosphatidate (1-16:1, 2-16:1) transport, ER membrane-mitochondrial membrane 0 0.0794052 0 0.000161448 -r_3761 phosphatidate (1-18:0, 2-16:1) transport, ER membrane-mitochondrial membrane 0 0.0793094 0 0.0288239 -r_3762 phosphatidate (1-18:1, 2-16:1) transport, ER membrane-mitochondrial membrane 0 0.0793018 0 0.0294736 -r_3763 phosphatidate (1-16:0, 2-18:1) transport, ER membrane-mitochondrial membrane 0 0.0792968 0 0.0294686 -r_3764 phosphatidate (1-16:1, 2-18:1) transport, ER membrane-mitochondrial membrane 0 0.0793018 0 0.000119904 -r_3765 phosphatidyl-L-serine (1-16:0, 2-16:1) transport, ER membrane-mitochondrial membrane 0 0.0194057 0 0 -r_3766 phosphatidyl-L-serine (1-16:1, 2-16:1) transport, ER membrane-mitochondrial membrane 0 0.01949 0.00358103 0 -r_3767 phosphatidyl-L-serine (1-18:0, 2-16:1) transport, ER membrane-mitochondrial membrane 0 0.019078 0 0 -r_3768 phosphatidyl-L-serine (1-18:1, 2-16:1) transport, ER membrane-mitochondrial membrane 0 0.0192519 0 0 -r_3769 phosphatidyl-L-serine (1-16:0, 2-18:1) transport, ER membrane-mitochondrial membrane 0 0.0193389 0 0 -r_3770 phosphatidyl-L-serine (1-16:1, 2-18:1) transport, ER membrane-mitochondrial membrane -2.18279e-11 0.0193724 0 0 -r_3771 phosphatidyl-L-serine (1-18:0, 2-18:1) transport, ER membrane-mitochondrial membrane 0 0.0190756 0 0 -r_3772 phosphatidyl-L-serine (1-18:1, 2-18:1) transport, ER membrane-mitochondrial membrane 0 0.0192175 0 0 -r_3773 phosphatidylethanolamine (1-16:0, 2-16:1) transport, mitochondrial membrane-ER membrane 0 0.0194057 0 0 -r_3774 phosphatidylethanolamine (1-16:1, 2-16:1) transport, mitochondrial membrane-ER membrane 0 0.01949 0.00358103 0 -r_3775 phosphatidylethanolamine (1-18:0, 2-16:1) transport, mitochondrial membrane-ER membrane 0 0.019078 0 0 -r_3776 phosphatidylethanolamine (1-18:1, 2-16:1) transport, mitochondrial membrane-ER membrane 0 0.0192519 0 0 -r_3777 phosphatidylethanolamine (1-16:0, 2-18:1) transport, mitochondrial membrane-ER membrane 0 0.0193389 0 0 -r_3778 phosphatidylethanolamine (1-16:1, 2-18:1) transport, mitochondrial membrane-ER membrane -2.18279e-11 0.0193724 0 0 -r_3779 phosphatidylethanolamine (1-18:0, 2-18:1) transport, mitochondrial membrane-ER membrane 0 0.0190756 0 0 -r_3780 phosphatidylethanolamine (1-18:1, 2-18:1) transport, mitochondrial membrane-ER membrane 0 0.0192175 0 0 -r_3781 phosphatidylcholine (1-16:0, 2-16:1) transport, ER membrane-mitochondrial membrane -1000 1000 0 0 -r_3782 phosphatidylcholine (1-16:1, 2-16:1) transport, ER membrane-mitochondrial membrane -1000 1000 0 0 -r_3783 phosphatidylcholine (1-18:0, 2-16:1) transport, ER membrane-mitochondrial membrane -1000 1000 0 0 -r_3784 phosphatidylcholine (1-18:1, 2-16:1) transport, ER membrane-mitochondrial membrane -1000 1000 0 0 -r_3785 phosphatidylcholine (1-16:0, 2-18:1) transport, ER membrane-mitochondrial membrane -1000 1000 0 0 -r_3786 phosphatidylcholine (1-16:1, 2-18:1) transport, ER membrane-mitochondrial membrane -1000 1000 0 0 -r_3787 phosphatidylcholine (1-18:0, 2-18:1) transport, ER membrane-mitochondrial membrane -1000 1000 0 0 -r_3788 phosphatidylcholine (1-18:1, 2-18:1) transport, ER membrane-mitochondrial membrane -1000 1000 0 0 -r_3789 diglyceride (1-16:0, 2-16:1) transport, ER membrane-Golgi membrane -0.291125 0 0 0 -r_3790 diglyceride (1-16:1, 2-16:1) transport, ER membrane-Golgi membrane -0.291152 6.48015e-12 0 0 -r_3791 diglyceride (1-18:0, 2-16:1) transport, ER membrane-Golgi membrane -0.290801 0 0 0 -r_3792 diglyceride (1-18:1, 2-16:1) transport, ER membrane-Golgi membrane -0.290773 1.13687e-12 0 0 -r_3793 diglyceride (1-16:0, 2-18:1) transport, ER membrane-Golgi membrane -0.290755 0 0 0 -r_3794 diglyceride (1-16:1, 2-18:1) transport, ER membrane-Golgi membrane -0.290773 0 0 0 -r_3795 diglyceride (1-18:0, 2-18:1) transport, ER membrane-Golgi membrane -0.290511 0 0 0 -r_3796 diglyceride (1-18:1, 2-18:1) transport, ER membrane-Golgi membrane -0.290412 9.66338e-12 0 0 -r_3797 phosphatidate (1-16:0, 2-16:1) transport, ER membrane-Golgi membrane 0 0.291125 0 0 -r_3798 phosphatidate (1-16:1, 2-16:1) transport, ER membrane-Golgi membrane 0 0.291152 0 0 -r_3799 phosphatidate (1-18:0, 2-16:1) transport, ER membrane-Golgi membrane 0 0.290801 0 0.108098 -r_3800 phosphatidate (1-18:1, 2-16:1) transport, ER membrane-Golgi membrane 0 0.290773 0 1.32858e-05 -r_3801 phosphatidate (1-16:0, 2-18:1) transport, ER membrane-Golgi membrane 0 0.290755 0 7.10495e-05 -r_3802 phosphatidate (1-16:1, 2-18:1) transport, ER membrane-Golgi membrane 0 0.290773 0 3.31548e-06 -r_3803 phosphatidate (1-18:0, 2-18:1) transport, ER membrane-Golgi membrane 0 0.290511 0 0 -r_3804 phosphatidate (1-18:1, 2-18:1) transport, ER membrane-Golgi membrane 0 0.290412 0 1.95143e-05 -r_3805 1-phosphatidyl-1D-myo-inositol (1-16:0, 2-16:1) transport, ER membrane-Golgi membrane -0.290399 0.109172 0 0 -r_3806 1-phosphatidyl-1D-myo-inositol (1-16:1, 2-16:1) transport, ER membrane-Golgi membrane -0.290399 0.109182 0 0 -r_3807 1-phosphatidyl-1D-myo-inositol (1-18:0, 2-16:1) transport, ER membrane-Golgi membrane -0.290399 0.10905 0 0 -r_3808 1-phosphatidyl-1D-myo-inositol (1-18:1, 2-16:1) transport, ER membrane-Golgi membrane -0.290399 0.10904 0 0 -r_3809 1-phosphatidyl-1D-myo-inositol (1-16:0, 2-18:1) transport, ER membrane-Golgi membrane -0.290399 0.109033 0 0 -r_3810 1-phosphatidyl-1D-myo-inositol (1-16:1, 2-18:1) transport, ER membrane-Golgi membrane -0.290399 0.10904 0 0 -r_3811 1-phosphatidyl-1D-myo-inositol (1-18:0, 2-18:1) transport, ER membrane-Golgi membrane -0.290399 0.108942 0 0 -r_3812 1-phosphatidyl-1D-myo-inositol (1-18:1, 2-18:1) transport, ER membrane-Golgi membrane -0.290399 0.108905 0 0 -r_3813 phosphatidyl-L-serine (1-16:0, 2-16:1) transport, ER membrane-Golgi membrane 0 0.0194057 0 0.00115647 -r_3814 phosphatidyl-L-serine (1-16:1, 2-16:1) transport, ER membrane-Golgi membrane 0 0.01949 0 0.00400557 -r_3815 phosphatidyl-L-serine (1-18:0, 2-16:1) transport, ER membrane-Golgi membrane 0 0.019078 0 0.00382023 -r_3816 phosphatidyl-L-serine (1-18:1, 2-16:1) transport, ER membrane-Golgi membrane 0 0.0192519 0 0 -r_3817 phosphatidyl-L-serine (1-16:0, 2-18:1) transport, ER membrane-Golgi membrane 0 0.0193389 0 -0.0393421 -r_3818 phosphatidyl-L-serine (1-16:1, 2-18:1) transport, ER membrane-Golgi membrane 0 0.0193724 0 0.00400557 -r_3819 phosphatidyl-L-serine (1-18:0, 2-18:1) transport, ER membrane-Golgi membrane 0 0.0190756 0 0.00382023 -r_3820 phosphatidyl-L-serine (1-18:1, 2-18:1) transport, ER membrane-Golgi membrane 0 0.0192175 0 0.00397084 -r_3821 phosphatidylethanolamine (1-16:0, 2-16:1) transport, Golgi membrane-ER membrane 0 0.0194057 0 0.00400298 -r_3822 phosphatidylethanolamine (1-16:1, 2-16:1) transport, Golgi membrane-ER membrane 0 0.01949 0 0.00400557 -r_3823 phosphatidylethanolamine (1-18:0, 2-16:1) transport, Golgi membrane-ER membrane 0 0.019078 0 0.00382023 -r_3824 phosphatidylethanolamine (1-18:1, 2-16:1) transport, Golgi membrane-ER membrane 0 0.0192519 0 0.00397084 -r_3825 phosphatidylethanolamine (1-16:0, 2-18:1) transport, Golgi membrane-ER membrane 0 0.0193389 0 0.00400298 -r_3826 phosphatidylethanolamine (1-16:1, 2-18:1) transport, Golgi membrane-ER membrane 0 0.0193724 0 0.00400557 -r_3827 phosphatidylethanolamine (1-18:0, 2-18:1) transport, Golgi membrane-ER membrane 0 0.0190756 0 0.00382023 -r_3828 phosphatidylethanolamine (1-18:1, 2-18:1) transport, Golgi membrane-ER membrane 0 0.0192175 0 0.00397084 -r_3829 phosphatidate (1-16:0, 2-16:1) transport, ER membrane-vacuolar membrane 0 0 0 0 -r_3830 phosphatidate (1-16:1, 2-16:1) transport, ER membrane-vacuolar membrane 0 0 0 0 -r_3831 phosphatidate (1-18:0, 2-16:1) transport, ER membrane-vacuolar membrane 0 0 0 0 -r_3832 phosphatidate (1-18:1, 2-16:1) transport, ER membrane-vacuolar membrane 0 0 0 0 -r_3833 phosphatidate (1-16:0, 2-18:1) transport, ER membrane-vacuolar membrane 0 0 0 0 -r_3834 phosphatidate (1-16:1, 2-18:1) transport, ER membrane-vacuolar membrane 0 0 0 0 -r_3835 phosphatidate (1-18:0, 2-18:1) transport, ER membrane-vacuolar membrane 0 0 0 0 -r_3836 phosphatidate (1-18:1, 2-18:1) transport, ER membrane-vacuolar membrane 0 0 0 0 -r_3837 1-phosphatidyl-1D-myo-inositol (1-16:0, 2-16:1) transport, ER membrane-vacuolar membrane 0 0.290399 0 0 -r_3838 1-phosphatidyl-1D-myo-inositol (1-16:1, 2-16:1) transport, ER membrane-vacuolar membrane 0 0.290399 0 0 -r_3839 1-phosphatidyl-1D-myo-inositol (1-18:0, 2-16:1) transport, ER membrane-vacuolar membrane 0 0.290399 0 0 -r_3840 1-phosphatidyl-1D-myo-inositol (1-18:1, 2-16:1) transport, ER membrane-vacuolar membrane 0 0.290399 0 0 -r_3841 1-phosphatidyl-1D-myo-inositol (1-16:0, 2-18:1) transport, ER membrane-vacuolar membrane 0 0.290399 0 0 -r_3842 1-phosphatidyl-1D-myo-inositol (1-16:1, 2-18:1) transport, ER membrane-vacuolar membrane 0 0.290399 0 0 -r_3843 1-phosphatidyl-1D-myo-inositol (1-18:0, 2-18:1) transport, ER membrane-vacuolar membrane 0 0.290399 0 0 -r_3844 1-phosphatidyl-1D-myo-inositol (1-18:1, 2-18:1) transport, ER membrane-vacuolar membrane 0 0.290399 0 0 -r_3845 phosphatidyl-L-serine (1-16:0, 2-16:1) transport, ER membrane-vacuolar membrane 0 0.0194057 0 0 -r_3846 phosphatidyl-L-serine (1-16:1, 2-16:1) transport, ER membrane-vacuolar membrane 0 0.01949 0 0 -r_3847 phosphatidyl-L-serine (1-18:0, 2-16:1) transport, ER membrane-vacuolar membrane 0 0.019078 0 0 -r_3848 phosphatidyl-L-serine (1-18:1, 2-16:1) transport, ER membrane-vacuolar membrane 0 0.0192519 0 0 -r_3849 phosphatidyl-L-serine (1-16:0, 2-18:1) transport, ER membrane-vacuolar membrane 0 0.0193389 0 0 -r_3850 phosphatidyl-L-serine (1-16:1, 2-18:1) transport, ER membrane-vacuolar membrane 0 0.0193724 0 0 -r_3851 phosphatidyl-L-serine (1-18:0, 2-18:1) transport, ER membrane-vacuolar membrane 0 0.0190756 0 0 -r_3852 phosphatidyl-L-serine (1-18:1, 2-18:1) transport, ER membrane-vacuolar membrane 0 0.0192175 0 0 -r_3853 phosphatidylethanolamine (1-16:0, 2-16:1) transport, vacuolar membrane-ER membrane 0 0.0194057 0 0 -r_3854 phosphatidylethanolamine (1-16:1, 2-16:1) transport, vacuolar membrane-ER membrane 0 0.01949 0 0 -r_3855 phosphatidylethanolamine (1-18:0, 2-16:1) transport, vacuolar membrane-ER membrane 0 0.019078 0 0 -r_3856 phosphatidylethanolamine (1-18:1, 2-16:1) transport, vacuolar membrane-ER membrane 0 0.0192519 0 0 -r_3857 phosphatidylethanolamine (1-16:0, 2-18:1) transport, vacuolar membrane-ER membrane 0 0.0193389 0 0 -r_3858 phosphatidylethanolamine (1-16:1, 2-18:1) transport, vacuolar membrane-ER membrane 0 0.0193724 0 0 -r_3859 phosphatidylethanolamine (1-18:0, 2-18:1) transport, vacuolar membrane-ER membrane 0 0.0190756 0 0 -r_3860 phosphatidylethanolamine (1-18:1, 2-18:1) transport, vacuolar membrane-ER membrane 0 0.0192175 0 0 -r_3861 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-16:0, 2-16:1) transport, vacuolar membrane-ER membrane 0 0.290399 0 0 -r_3862 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-16:1, 2-16:1) transport, vacuolar membrane-ER membrane 0 0.290399 0 0 -r_3863 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-18:0, 2-16:1) transport, vacuolar membrane-ER membrane 0 0.290399 0 0 -r_3864 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-18:1, 2-16:1) transport, vacuolar membrane-ER membrane 0 0.290399 0 0 -r_3865 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-16:0, 2-18:1) transport, vacuolar membrane-ER membrane 0 0.290399 0 0 -r_3866 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-16:1, 2-18:1) transport, vacuolar membrane-ER membrane 0 0.290399 0 0 -r_3867 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-18:0, 2-18:1) transport, vacuolar membrane-ER membrane 0 0.290399 0 0 -r_3868 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-18:1, 2-18:1) transport, vacuolar membrane-ER membrane 0 0.290399 0 0 -r_3869 1-phosphatidyl-1D-myo-inositol (1-16:0, 2-16:1) transport, ER membrane-cell envelope -0.1452 0.290399 0 0 -r_3870 1-phosphatidyl-1D-myo-inositol (1-16:1, 2-16:1) transport, ER membrane-cell envelope -0.1452 0.290399 0 8.89576e-05 -r_3871 1-phosphatidyl-1D-myo-inositol (1-18:0, 2-16:1) transport, ER membrane-cell envelope -0.1452 0.290399 0 -0.000117137 -r_3872 1-phosphatidyl-1D-myo-inositol (1-18:1, 2-16:1) transport, ER membrane-cell envelope -0.1452 0.290399 0 -0.000117137 -r_3873 1-phosphatidyl-1D-myo-inositol (1-16:0, 2-18:1) transport, ER membrane-cell envelope -0.1452 0.290399 0 4.12301e-06 -r_3874 1-phosphatidyl-1D-myo-inositol (1-16:1, 2-18:1) transport, ER membrane-cell envelope -0.1452 0.290399 0 0.000128412 -r_3875 1-phosphatidyl-1D-myo-inositol (1-18:0, 2-18:1) transport, ER membrane-cell envelope -0.1452 0.290399 0 -0.000117137 -r_3876 1-phosphatidyl-1D-myo-inositol (1-18:1, 2-18:1) transport, ER membrane-cell envelope -0.1452 0.290399 0 -0.000117137 -r_3877 phosphatidylcholine (1-16:0, 2-16:1) transport, ER membrane-cell envelope 0 0.1089 0 0 -r_3878 phosphatidylcholine (1-16:1, 2-16:1) transport, ER membrane-cell envelope 0 0.1089 0 0 -r_3879 phosphatidylcholine (1-18:0, 2-16:1) transport, ER membrane-cell envelope 0 0.1089 0 0 -r_3880 phosphatidylcholine (1-18:1, 2-16:1) transport, ER membrane-cell envelope 0 0.1089 0 0 -r_3881 phosphatidylcholine (1-16:0, 2-18:1) transport, ER membrane-cell envelope 0 0.1089 0 0 -r_3882 phosphatidylcholine (1-16:1, 2-18:1) transport, ER membrane-cell envelope 0 0.1089 0 0 -r_3883 phosphatidylcholine (1-18:0, 2-18:1) transport, ER membrane-cell envelope 0 0.1089 0 0 -r_3884 phosphatidylcholine (1-18:1, 2-18:1) transport, ER membrane-cell envelope 0 0.1089 0 0 -r_3885 phosphatidylethanolamine (1-16:0, 2-16:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3886 phosphatidylethanolamine (1-16:1, 2-16:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3887 phosphatidylethanolamine (1-18:0, 2-16:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3888 phosphatidylethanolamine (1-18:1, 2-16:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3889 phosphatidylethanolamine (1-16:0, 2-18:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3890 phosphatidylethanolamine (1-16:1, 2-18:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3891 phosphatidylethanolamine (1-18:0, 2-18:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3892 phosphatidylethanolamine (1-18:1, 2-18:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3893 phosphatidyl-L-serine (1-16:0, 2-16:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3894 phosphatidyl-L-serine (1-16:1, 2-16:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3895 phosphatidyl-L-serine (1-18:0, 2-16:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3896 phosphatidyl-L-serine (1-18:1, 2-16:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3897 phosphatidyl-L-serine (1-16:0, 2-18:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3898 phosphatidyl-L-serine (1-16:1, 2-18:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3899 phosphatidyl-L-serine (1-18:0, 2-18:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3900 phosphatidyl-L-serine (1-18:1, 2-18:1) transport, ER membrane-cell envelope 0 0 0 0 -r_3901 lignoceric acid transport, cell envelope-ER membrane -1000 1000 0 -0.0666067 -r_3902 cerotic acid transport, cell envelope-ER membrane -1000 1000 0 0.0666067 -r_3903 phosphatidate (1-16:0, 2-16:1) transport, cell envelope-ER membrane 0 0.1089 0 0 -r_3904 phosphatidate (1-16:1, 2-16:1) transport, cell envelope-ER membrane 0 0.1089 0 0 -r_3905 phosphatidate (1-18:0, 2-16:1) transport, cell envelope-ER membrane 0 0.1089 0 0 -r_3906 phosphatidate (1-18:1, 2-16:1) transport, cell envelope-ER membrane 0 0.1089 0 0 -r_3907 phosphatidate (1-16:0, 2-18:1) transport, cell envelope-ER membrane 0 0.1089 0 0 -r_3908 phosphatidate (1-16:1, 2-18:1) transport, cell envelope-ER membrane 0 0.1089 0 0 -r_3909 phosphatidate (1-18:0, 2-18:1) transport, cell envelope-ER membrane 0 0.1089 0 0 -r_3910 phosphatidate (1-18:1, 2-18:1) transport, cell envelope-ER membrane 0 0.1089 0 0 -r_3911 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-16:0, 2-16:1) transport, cell envelope-ER membrane -0.290399 0.290399 0 0.0218412 -r_3912 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-16:1, 2-16:1) transport, cell envelope-ER membrane -0.290399 0.290399 0 0.107696 -r_3913 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-18:0, 2-16:1) transport, cell envelope-ER membrane -0.290399 0.290399 0 0.107696 -r_3914 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-18:1, 2-16:1) transport, cell envelope-ER membrane -0.290399 0.290399 0 0.107696 -r_3915 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-16:0, 2-18:1) transport, cell envelope-ER membrane -0.290399 0.290399 0 -0.107696 -r_3916 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-16:1, 2-18:1) transport, cell envelope-ER membrane -0.290399 0.290399 0 -0.107696 -r_3917 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-18:0, 2-18:1) transport, cell envelope-ER membrane -0.290399 0.290399 0 -0.107696 -r_3918 1-phosphatidyl-1D-myo-inositol 4-phosphate (1-18:1, 2-18:1) transport, cell envelope-ER membrane -0.290399 0.290399 0 0.107696 -r_3919 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-16:0, 2-16:1) transport, cell envelope-ER membrane 0 0.290399 0 0 -r_3920 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-16:1, 2-16:1) transport, cell envelope-ER membrane 0 0.290399 0 0 -r_3921 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-18:0, 2-16:1) transport, cell envelope-ER membrane 0 0.290399 0 0 -r_3922 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-18:1, 2-16:1) transport, cell envelope-ER membrane 0 0.290399 0 0 -r_3923 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-16:0, 2-18:1) transport, cell envelope-ER membrane 0 0.290399 0 0 -r_3924 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-16:1, 2-18:1) transport, cell envelope-ER membrane 0 0.290399 0 0 -r_3925 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-18:0, 2-18:1) transport, cell envelope-ER membrane 0 0.290399 0 0 -r_3926 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate (1-18:1, 2-18:1) transport, cell envelope-ER membrane 0 0.290399 0 0 -r_3927 zymosteryl palmitoleate transport, ER membrane-cell envelope 0 0.17424 0 0 -r_3928 zymosteryl oleate transport, ER membrane-cell envelope 0 0.17424 0 0 -r_3929 1-phosphatidyl-1D-myo-inositol (1-16:0, 2-16:1) transport, ER membrane-nucleus 0 0.1452 0 0 -r_3930 1-phosphatidyl-1D-myo-inositol (1-16:1, 2-16:1) transport, ER membrane-nucleus 0 0.1452 0 0 -r_3931 1-phosphatidyl-1D-myo-inositol (1-18:0, 2-16:1) transport, ER membrane-nucleus 0 0.1452 0 0 -r_3932 1-phosphatidyl-1D-myo-inositol (1-18:1, 2-16:1) transport, ER membrane-nucleus 0 0.1452 0 0 -r_3933 1-phosphatidyl-1D-myo-inositol (1-16:0, 2-18:1) transport, ER membrane-nucleus 0 0.1452 0 0 -r_3934 1-phosphatidyl-1D-myo-inositol (1-16:1, 2-18:1) transport, ER membrane-nucleus 0 0.1452 0 0 -r_3935 1-phosphatidyl-1D-myo-inositol (1-18:0, 2-18:1) transport, ER membrane-nucleus 0 0.1452 0 0 -r_3936 1-phosphatidyl-1D-myo-inositol (1-18:1, 2-18:1) transport, ER membrane-nucleus 0 0.1452 0 0.000718124 -r_3937 lignoceric acid transport, ER membrane-ER -0.17424 0 0 -0.0426516 -r_3938 cerotic acid transport, ER membrane-ER -0.17424 0 0 -0.0646174 -r_3939 ergosterol transport, ER-ER membrane -999.997 1000 0.00324521 0 -r_3940 phosphate transport, ER-ER membrane 0 0.290399 0 0.107696 -r_3941 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-16:0, 2-16:1) transport, vacuolar membrane-Golgi membrane 0 0.290399 0 0 -r_3942 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-16:1, 2-16:1) transport, vacuolar membrane-Golgi membrane 0 0.290399 0 0 -r_3943 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-18:0, 2-16:1) transport, vacuolar membrane-Golgi membrane 0 0.290399 0 0 -r_3944 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-18:1, 2-16:1) transport, vacuolar membrane-Golgi membrane 0 0.290399 0 0 -r_3945 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-16:0, 2-18:1) transport, vacuolar membrane-Golgi membrane 0 0.290399 0 0 -r_3946 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-16:1, 2-18:1) transport, vacuolar membrane-Golgi membrane 0 0.290399 0 0 -r_3947 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-18:0, 2-18:1) transport, vacuolar membrane-Golgi membrane 0 0.290399 0 0 -r_3948 1-phosphatidyl-1D-myo-inositol 3-phosphate (1-18:1, 2-18:1) transport, vacuolar membrane-Golgi membrane 0 0.290399 0 0 -r_3949 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-16:0, 2-16:1) transport, vacuolar membrane-cell envelope 0 0.1452 0 0 -r_3950 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-16:1, 2-16:1) transport, vacuolar membrane-cell envelope 0 0.1452 0 0 -r_3951 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-18:0, 2-16:1) transport, vacuolar membrane-cell envelope 0 0.1452 0 0 -r_3952 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-18:1, 2-16:1) transport, vacuolar membrane-cell envelope 0 0.1452 0 0 -r_3953 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-16:0, 2-18:1) transport, vacuolar membrane-cell envelope 0 0.1452 0 0 -r_3954 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-16:1, 2-18:1) transport, vacuolar membrane-cell envelope 0 0.1452 0 0 -r_3955 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-18:0, 2-18:1) transport, vacuolar membrane-cell envelope 0 0.1452 0 0 -r_3956 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate (1-18:1, 2-18:1) transport, vacuolar membrane-cell envelope 0 0.1452 0 0 -r_3957 H+ transport, mitochondrion-mitochondrial membrane -0.238216 4.88853e-12 0 -0.0887308 -r_3958 glycerol 3-phosphate transport, mitochondrion-mitochondrial membrane -6.0254e-12 5.91172e-12 0 -1.13687e-13 -r_3959 CMP transport, mitochondrion-mitochondrial membrane -0.0794052 0 0 -0.0295769 -r_3960 CTP transport, mitochondrion-mitochondrial membrane 0 0.0794052 0 0.0295769 -r_3961 phosphate transport, mitochondrion-mitochondrial membrane -0.0794052 0 0 -1.11022e-16 -r_3962 diphosphate transport, mitochondrion-mitochondrial membrane -0.0794052 0 0 1.13687e-13 -r_3963 1-phosphatidyl-1D-myo-inositol (1-16:0, 2-16:1) [cytoplasm] SLIME rxn 0 0.000771502 0 0.000757437 -r_3964 1-phosphatidyl-1D-myo-inositol (1-16:1, 2-16:1) [cytoplasm] SLIME rxn 0 0.00077343 0 0.000759329 -r_3965 1-phosphatidyl-1D-myo-inositol (1-18:0, 2-16:1) [cytoplasm] SLIME rxn 0 0.000719566 0 0.000706445 -r_3966 1-phosphatidyl-1D-myo-inositol (1-18:1, 2-16:1) [cytoplasm] SLIME rxn -6.43966e-12 0.000747431 0 0.00073382 -r_3967 1-phosphatidyl-1D-myo-inositol (1-16:0, 2-18:1) [cytoplasm] SLIME rxn 0 0.00074563 0 0.000732053 -r_3968 1-phosphatidyl-1D-myo-inositol (1-16:1, 2-18:1) [cytoplasm] SLIME rxn 0 0.000747431 0 0.00073382 -r_3969 1-phosphatidyl-1D-myo-inositol (1-18:0, 2-18:1) [cytoplasm] SLIME rxn 0 0.000719542 0 0.000706445 -r_3970 1-phosphatidyl-1D-myo-inositol (1-18:1, 2-18:1) [cytoplasm] SLIME rxn 0 0.00072312 0 0.000709969 -r_3971 ergosteryl palmitoleate [endoplasmic reticulum membrane] SLIME rxn 0 0.000970229 -1.65212e-12 0.000588797 -r_3972 ergosteryl oleate [endoplasmic reticulum membrane] SLIME rxn 0 0.000929852 0.000342107 0.000912894 -r_3973 ergosterol ester transport, ER membrane-cytoplasm 0.00059891 0.000614733 0.00059891 0.00059891 -r_3975 palmitate [cytoplasm] SLIME rxn 0 0.000523409 0 0.000513864 -r_3976 palmitoleate [cytoplasm] SLIME rxn 0 0.000527574 0 0.000517952 -r_3977 stearate [cytoplasm] SLIME rxn 0 0.00047159 0 0.00046301 -r_3978 oleate [cytoplasm] SLIME rxn 0 0.000474966 0 0.000466326 -r_3979 phosphatidyl-L-serine (1-16:0, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.00073233 0 0.000718975 -r_3980 phosphatidyl-L-serine (1-16:1, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000734349 0 0.000720956 -r_3981 phosphatidyl-L-serine (1-18:0, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000705363 0 0.000692506 -r_3982 phosphatidyl-L-serine (1-18:1, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.00070722 0 0.000694343 -r_3983 phosphatidyl-L-serine (1-16:0, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000705347 0 0.000692506 -r_3984 phosphatidyl-L-serine (1-16:1, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.00070722 0 0.000694343 -r_3985 phosphatidyl-L-serine (1-18:0, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000680298 0 0.000667917 -r_3986 phosphatidyl-L-serine (1-18:1, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000682024 0 0.000669625 -r_3987 phosphatidyl-L-serine transport, ER membrane-cytoplasm 0.00052367 0.000537505 0.00052367 0.00052367 -r_3988 phosphatidylcholine (1-16:0, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.00284801 0 0.00279622 -r_3989 phosphatidylcholine (1-16:1, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.00318987 0 0.00311629 -r_3990 phosphatidylcholine (1-18:0, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000719513 0 0.000706445 -r_3991 phosphatidylcholine (1-18:1, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.00192096 0 0.00158671 -r_3992 phosphatidylcholine (1-16:0, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.00253966 0 0.00237037 -r_3993 phosphatidylcholine (1-16:1, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.00252354 0 0.00237037 -r_3994 phosphatidylcholine (1-18:0, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000719513 0 0.000706445 -r_3995 phosphatidylcholine (1-18:1, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.00138465 0 0.00114286 -r_3996 phosphatidylcholine transport, ER membrane-cytoplasm 0.0022689 0.00232885 0.0022689 0.0022689 -r_3997 phosphatidylethanolamine (1-16:0, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000907142 0 0.0008906 -r_3998 phosphatidylethanolamine (1-16:1, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000909803 0 0.000893209 -r_3999 phosphatidylethanolamine (1-18:0, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000719559 0 0.000706445 -r_4000 phosphatidylethanolamine (1-18:1, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000874125 0 0.000858212 -r_4001 phosphatidylethanolamine (1-16:0, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000871669 0 0.000855803 -r_4002 phosphatidylethanolamine (1-16:1, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000874125 0 0.000858212 -r_4003 phosphatidylethanolamine (1-18:0, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000719534 0 0.000706445 -r_4004 phosphatidylethanolamine (1-18:1, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000841137 0 0.000825854 -r_4005 phosphatidylethanolamine transport, ER membrane-cytoplasm 0.000609778 0.000625888 0.000609778 0.000609778 -r_4006 triglyceride (1-16:0, 2-16:1, 3-16:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.000769091 0 0.000755067 -r_4007 triglyceride (1-16:0, 2-18:1, 3-16:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.000743158 0 0.00072965 -r_4008 triglyceride (1-16:1, 2-16:1, 3-16:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.000771023 0 0.000756962 -r_4009 triglyceride (1-16:1, 2-18:1, 3-16:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.000744963 0 0.000731419 -r_4010 triglyceride (1-18:0, 2-16:1, 3-16:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.000719527 0 0.000706445 -r_4011 triglyceride (1-18:0, 2-18:1, 3-16:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.000718909 0 0.000705887 -r_4012 triglyceride (1-18:1, 2-16:1, 3-16:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.000744963 0 0.000731419 -r_4013 triglyceride (1-18:1, 2-18:1, 3-16:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.000720599 0 0.000707543 -r_4014 triglyceride (1-16:0, 2-16:1, 3-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000771023 0 0.000756962 -r_4015 triglyceride (1-16:0, 2-18:1, 3-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000744963 0 0.000731419 -r_4016 triglyceride (1-16:1, 2-16:1, 3-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000772964 0 0.000758867 -r_4017 triglyceride (1-16:1, 2-18:1, 3-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000746776 0 0.000733197 -r_4018 triglyceride (1-18:0, 2-16:1, 3-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.00071953 0 0.000706445 -r_4019 triglyceride (1-18:0, 2-18:1, 3-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.00071948 0 0.000706445 -r_4020 triglyceride (1-18:1, 2-16:1, 3-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000746776 0 0.000733197 -r_4021 triglyceride (1-18:1, 2-18:1, 3-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000722296 0 0.000709207 -r_4022 triglyceride (1-16:0, 2-16:1, 3-18:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.000719527 0 0.000706445 -r_4023 triglyceride (1-16:0, 2-18:1, 3-18:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.000718909 0 0.000705887 -r_4024 triglyceride (1-16:1, 2-16:1, 3-18:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.00071953 0 0.000706445 -r_4025 triglyceride (1-16:1, 2-18:1, 3-18:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.00071948 0 0.000706445 -r_4026 triglyceride (1-18:0, 2-16:1, 3-18:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.000359765 0 0.000353222 -r_4027 triglyceride (1-18:0, 2-18:1, 3-18:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.000359753 0 0.000353222 -r_4028 triglyceride (1-18:1, 2-16:1, 3-18:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.00071948 0 0.000706445 -r_4029 triglyceride (1-18:1, 2-18:1, 3-18:0) [endoplasmic reticulum membrane] SLIME rxn 0 0.000554626 0 0.00052323 -r_4030 triglyceride (1-16:0, 2-16:1, 3-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000744963 0 0.000731419 -r_4031 triglyceride (1-16:0, 2-18:1, 3-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000720599 0 0.000707543 -r_4032 triglyceride (1-16:1, 2-16:1, 3-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000746776 0 0.000733197 -r_4033 triglyceride (1-16:1, 2-18:1, 3-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000722296 0 0.000709207 -r_4034 triglyceride (1-18:0, 2-16:1, 3-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.00071948 0 0.000706445 -r_4035 triglyceride (1-18:0, 2-18:1, 3-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000554626 0 0.00052323 -r_4036 triglyceride (1-18:1, 2-16:1, 3-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000722296 0 0.000709207 -r_4037 triglyceride (1-18:1, 2-18:1, 3-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0.000559848 0 0.000528134 -r_4038 triglyceride transport, ER membrane-cytoplasm 0.000603425 0.000619367 0.000603425 0.000603425 -r_4039 succinyl-CoA:acetate CoA transferase -0.429383 0.290399 0 -0.0233803 -r_4040 heme a transport 8.8e-08 9.03249e-08 8.8e-08 8.8e-08 -r_4041 biomass pseudoreaction 0.088 0.0903249 0.088 0.0886775 -r_4042 raffinose invertase 0 0 0 0 -r_4043 raffinose exchange 0 0 0 0 -r_4044 melibiose exchange 0 0 0 0 -r_4045 uridine hydrolase 0 0.290399 0 0.107696 -r_4046 non-growth associated maintenance reaction 0.7 0.7 0.7 0.7 -r_4047 protein pseudoreaction 0.088 0.0903249 0.088 0.0886775 -r_4048 carbohydrate pseudoreaction 0.088 0.0903249 0.088 0.0886775 -r_4049 RNA pseudoreaction 0.088 0.0903249 0.088 0.0886775 -r_4050 DNA pseudoreaction 0.088 0.0903249 0.088 0.0886775 -r_4051 ceramide transport 0 0 0 0 -r_4052 inositol phosphomannosylinositol phosphoceramide transport 0 0 0 0 -r_4053 inositol-P-ceramide transport 0 0 0 0 -r_4054 mannosylinositol phosphorylceramide transport 0 0 0 0 -r_4055 long-chain base transport 0 0 0 0 -r_4056 long-chain base phosphate transport 0 0 0 0 -r_4057 phosphatidate transport 0 0 0 0 -r_4058 diglyceride transport 0 0 0 0 -r_4059 sn-2-acyl-1-lysophosphatidylinositol transport 0 0 0 0 -r_4060 phosphatidylglycerol transport 0 0 0 0 -r_4061 cardiolipin transport 0 0 0 0 -r_4062 lipid backbone exchange 0 0 0 0 -r_4063 lipid backbone pseudoreaction 0.088 0.0903249 0.088 0.0886775 -r_4064 lipid chain exchange 0 0 0 0 -r_4065 lipid chain pseudoreaction 0.088 0.0903249 0.088 0.0886775 -r_4066 ceramide-1 (C24) [Golgi] SLIME rxn 0 0 0 0 -r_4067 ceramide-1 (C26) [Golgi] SLIME rxn 0 0 0 0 -r_4068 ceramide-2 (C24) [Golgi] SLIME rxn 0 0 0 0 -r_4069 ceramide-2 (C26) [Golgi] SLIME rxn 0 0 0 0 -r_4070 ceramide-2' (C24) [Golgi] SLIME rxn 0 0 0 0 -r_4071 ceramide-2' (C26) [Golgi] SLIME rxn 0 0 0 0 -r_4072 ceramide-3 (C24) [Golgi] SLIME rxn 0 0 0 0 -r_4073 ceramide-3 (C26) [Golgi] SLIME rxn 0 0 0 0 -r_4074 ceramide-4 (C24) [Golgi] SLIME rxn 0 0 0 0 -r_4075 ceramide-4 (C26) [Golgi] SLIME rxn 0 0 0 0 -r_4076 phytosphingosine [endoplasmic reticulum] SLIME rxn 0 0 0 0 -r_4077 phytosphingosine 1-phosphate [endoplasmic reticulum] SLIME rxn 0 0 0 0 -r_4078 sphinganine [endoplasmic reticulum] SLIME rxn 0 0 0 0 -r_4079 sphinganine 1-phosphate [endoplasmic reticulum] SLIME rxn 0 0 0 0 -r_4080 phosphatidate (1-16:0, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4081 phosphatidate (1-16:0, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4082 phosphatidate (1-16:1, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4083 phosphatidate (1-16:1, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4084 phosphatidate (1-18:0, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4085 phosphatidate (1-18:0, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4086 phosphatidate (1-18:1, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4087 phosphatidate (1-18:1, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4088 diglyceride (1-16:0, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4089 diglyceride (1-16:0, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4090 diglyceride (1-16:1, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4091 diglyceride (1-16:1, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4092 diglyceride (1-18:0, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4093 diglyceride (1-18:0, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4094 diglyceride (1-18:1, 2-16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4095 diglyceride (1-18:1, 2-18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4096 sn-2-acyl-1-lysophosphatidylinositol (16:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4097 sn-2-acyl-1-lysophosphatidylinositol (18:1) [endoplasmic reticulum membrane] SLIME rxn 0 0 0 0 -r_4098 phosphatidylglycerol (1-16:0, 2-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4099 phosphatidylglycerol (1-16:1, 2-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4100 phosphatidylglycerol (1-18:0, 2-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4101 phosphatidylglycerol (1-18:1, 2-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4102 phosphatidylglycerol (1-16:0, 2-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4103 phosphatidylglycerol (1-16:1, 2-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4104 cardiolipin (1-16:0, 2-16:1, 3-16:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4105 cardiolipin (1-16:0, 2-16:1, 3-16:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4106 cardiolipin (1-16:0, 2-16:1, 3-18:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4107 cardiolipin (1-16:0, 2-16:1, 3-18:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4108 cardiolipin (1-16:0, 2-16:1, 3-16:0, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4109 cardiolipin (1-16:0, 2-16:1, 3-16:1, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4110 cardiolipin (1-16:1, 2-16:1, 3-16:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4111 cardiolipin (1-16:1, 2-16:1, 3-16:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4112 cardiolipin (1-16:1, 2-16:1, 3-18:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4113 cardiolipin (1-16:1, 2-16:1, 3-18:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4114 cardiolipin (1-16:1, 2-16:1, 3-16:0, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4115 cardiolipin (1-16:1, 2-16:1, 3-16:1, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4116 cardiolipin (1-18:0, 2-16:1, 3-16:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4117 cardiolipin (1-18:0, 2-16:1, 3-16:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4118 cardiolipin (1-18:0, 2-16:1, 3-18:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4119 cardiolipin (1-18:0, 2-16:1, 3-18:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4120 cardiolipin (1-18:0, 2-16:1, 3-16:0, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4121 cardiolipin (1-18:0, 2-16:1, 3-16:1, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4122 cardiolipin (1-18:1, 2-16:1, 3-16:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4123 cardiolipin (1-18:1, 2-16:1, 3-16:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4124 cardiolipin (1-18:1, 2-16:1, 3-18:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4125 cardiolipin (1-18:1, 2-16:1, 3-18:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4126 cardiolipin (1-18:1, 2-16:1, 3-16:0, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4127 cardiolipin (1-18:1, 2-16:1, 3-16:1, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4128 cardiolipin (1-16:0, 2-18:1, 3-16:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4129 cardiolipin (1-16:0, 2-18:1, 3-16:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4130 cardiolipin (1-16:0, 2-18:1, 3-18:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4131 cardiolipin (1-16:0, 2-18:1, 3-18:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4132 cardiolipin (1-16:0, 2-18:1, 3-16:0, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4133 cardiolipin (1-16:0, 2-18:1, 3-16:1, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4134 cardiolipin (1-16:1, 2-18:1, 3-16:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4135 cardiolipin (1-16:1, 2-18:1, 3-16:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4136 cardiolipin (1-16:1, 2-18:1, 3-18:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4137 cardiolipin (1-16:1, 2-18:1, 3-18:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4138 cardiolipin (1-16:1, 2-18:1, 3-16:0, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4139 cardiolipin (1-16:1, 2-18:1, 3-16:1, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4140 cardiolipin (1-18:1, 2-18:1, 3-16:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4141 cardiolipin (1-18:1, 2-18:1, 3-16:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4142 cardiolipin (1-18:1, 2-18:1, 3-18:0, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4143 cardiolipin (1-18:1, 2-18:1, 3-18:1, 4-16:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4144 cardiolipin (1-18:1, 2-18:1, 3-16:0, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4145 cardiolipin (1-18:1, 2-18:1, 3-16:1, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4146 cardiolipin (1-16:0, 2-16:1, 3-18:1, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4147 cardiolipin (1-16:1, 2-16:1, 3-18:1, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4148 cardiolipin (1-18:0, 2-16:1, 3-18:1, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4149 cardiolipin (1-18:1, 2-16:1, 3-18:1, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4150 cardiolipin (1-16:0, 2-18:1, 3-18:1, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4151 cardiolipin (1-16:1, 2-18:1, 3-18:1, 4-18:1) [mitochondrial membrane] SLIME rxn 0 0 0 0 -r_4152 Cytochrome c apocytochrome-c-lyase 0 0 0 0 -r_4153 (R)-Acetoin:NAD+ oxidoreductase 0 0 0 0 -r_4154 Probable diacetyl reductase [(R)-acetoin forming] 2 (EC 1.1.1.303) 0 0 0 0 -r_4155 Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-) (Cytochrome c oxidase assembly factor PET112) 0 0 0 0 -r_4156 Methionine aminopeptidase 2 (MAP 2) (MetAP 2) (EC 3.4.11.18) (Peptidase M) -0.0139613 0 0 -0.00653786 -r_4157 ADP-ribose 1''-phosphate phosphatase (EC 3.1.3.84) (EC 3.2.2.-) ([Protein ADP-ribosylglutamate] hydrolase) 0 0 0 0 -r_4158 NADPH2:quinone oxidoreductase 0 0 0 0 -r_4159 UDP-N-acetylglucosamine transferase subunit ALG14 (Asparagine-linked glycosylation protein 14) 0 0 0 0 -r_4160 ADP-ribose pyrophosphatase (EC 3.6.1.13) (ADP-ribose diphosphatase) (ADP-ribose phosphohydrolase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase) 0 0 0 0 -r_4161 Probable vacuolar amino acid transporter YPQ3 (PQ-loop repeat-containing protein 3) (Protein RTC2) (Restriction of telomere capping protein 2) 0 1000 0 30.2127 -r_4162 Probable vacuolar amino acid transporter YPQ3 (PQ-loop repeat-containing protein 3) (Protein RTC2) (Restriction of telomere capping protein 2) 0 1000 0 11.4835 -r_4163 Probable vacuolar amino acid transporter YPQ3 (PQ-loop repeat-containing protein 3) (Protein RTC2) (Restriction of telomere capping protein 2) 0 1000 0 30.844 -r_4164 oxalate:CoA ligase (AMP-forming) 0 0 0 0 -r_4165 Glucosidase 2 subunit alpha (EC 3.2.1.84) (Alpha-glucosidase II subunit alpha) (Glucosidase II subunit alpha) (Reversal of TOR2 lethality protein 2) 0 0 0 0 -r_4166 Glucosidase 2 subunit alpha (EC 3.2.1.84) (Alpha-glucosidase II subunit alpha) (Glucosidase II subunit alpha) (Reversal of TOR2 lethality protein 2) 0 0 0 0 -r_4167 Vacuolar cation-chloride cotransporter 1 (Vacuolar homolog of CCC family protein 1) 0 0 0 0 -r_4168 Probable metabolite transport protein YBR241C 0 0 0 0 -r_4169 Probable metabolite transport protein YBR241C 0 0 0 0 -r_4170 UDP-N-acetyl-D-glucosamine:dolichyl-phosphate N-acetyl-D-glucosamine phosphotransferase 0 0 0 0 -r_4171 (5-glutamyl)-peptide:amino-acid 5-glutamyltransferase 0 0.1452 0 0.0538478 -r_4172 P-type cation-transporting ATPase (EC 3.6.3.3) (Cadmium resistance protein 2) (Cadmium-translocating P-type ATPase) (Cd(2+)-exporting ATPase) 0 0 0 0 -r_4173 L-cysteine:sulfur-acceptor sulfurtransferase 0 0 0 0 -r_4174 Probable ATP-dependent permease 0 0 0 0 -r_4175 Putative aryl-alcohol dehydrogenase AAD3 (EC 1.1.1.-) 0 0 0 0 -r_4176 Putative aryl-alcohol dehydrogenase AAD3 (EC 1.1.1.-) 0 0 0 0 -r_4177 Putative aryl-alcohol dehydrogenase AAD3 (EC 1.1.1.-) 0 0 0 0 -r_4178 Putative aryl-alcohol dehydrogenase AAD3 (EC 1.1.1.-) 0 0 0 0 -r_4179 Putative aryl-alcohol dehydrogenase AAD3 (EC 1.1.1.-) 0 0 0 0 -r_4180 Benzyl alcohol:NAD+ oxidoreductase 0 0 0 0 -r_4181 Manganese-transporting ATPase 1 (EC 3.6.3.-) 0 0 0 0 -r_4183 D-Mannitol:NAD+ 2-oxidoreductase 0 0 0 0 -r_4184 4-hydroxy-4-methyl-2-oxoglutarate pyruvate-lyase (pyruvate-forming) 0 0 0 0 -r_4185 oxaloacetate carboxy-lyase (pyruvate-forming) 0 0.290399 0 0.0023247 -r_4186 L-methionine:thioredoxin-disulfide S-oxidoreductase 0 0 0 0 -r_4187 L-proline:tRNA(Pro) ligase (AMP-forming) 0 0 0 0 -r_4188 Glutathione-specific gamma-glutamylcyclotransferase (Gamma-GCG) (EC 4.3.2.-) 0 0.0967998 0 5.7258e-05 -r_4189 4a-hydroxytetrahydrobiopterin hydro-lyase 0 0 0 0 -r_4190 superoxide:superoxide oxidoreductase 0 0 0 0 -r_4191 2-Deoxy-D-glucose 6-phosphate phosphohydrolase 0 0 0 0 -r_4192 Cytochrome c lysine N-methyltransferase 1 (EC 2.1.1.59) 0 0 0 0 -r_4193 S-Adenosyl-L-methionine:histone-L-lysine N6-methyltransferase 0 0 0 0 -r_4194 Zinc transporter YKE4 0 0 0 0 -r_4195 Zinc transporter YKE4 0 0 0 0.0337081 -r_4196 NADH:ferricytochrome-b5 oxidoreductase 0.00973564 0.013263 0 0.0195198 -r_4197 NADH-cytochrome b5 reductase 1 (EC 1.6.2.2) (Microsomal cytochrome b reductase) (P35) 0 0 0 3.33067e-16 -r_4198 Benzil reductase ((S)-benzoin forming) IRC24 (EC 1.1.1.320) (Increased recombination centers protein 24) 0 0 0 0 -r_4199 Glutathione S-transferase 1 (EC 2.5.1.18) (GST-I) 0 0 0 0 -r_4200 Glutathione S-transferase 1 (EC 2.5.1.18) (GST-I) 0 0 0 0 -r_4201 Glutathione S-transferase 1 (EC 2.5.1.18) (GST-I) 0 0 0 0 -r_4202 L-methionine:oxidized-thioredoxin S-oxidoreductase 0 0.019394 0 0.00444544 -r_4203 Vacuolar aminopeptidase 1 (EC 3.4.11.22) (Aminopeptidase yscI) (Leucine aminopeptidase IV) (LAPIV) (Lysosomal aminopeptidase III) (Polypeptidase) (Vacuolar aminopeptidase I) -0.0317844 0 0 0 -r_4204 Vacuolar aminopeptidase 1 (EC 3.4.11.22) (Aminopeptidase yscI) (Leucine aminopeptidase IV) (LAPIV) (Lysosomal aminopeptidase III) (Polypeptidase) (Vacuolar aminopeptidase I) -0.01627 0 0 -0.01627 -r_4205 5-oxo-L-proline amidohydrolase (ATP-hydrolysing) 0 0.0967998 0 5.7258e-05 -r_4206 threo-3-hydroxy-L-aspartate ammonia-lyase 0 0 0 0 -r_4207 Glutathione S-transferase omega-like 2 (EC 2.5.1.18) (Extracellular mutant protein 4) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) 0 0 0 0 -r_4208 glutathione:dehydroascorbate oxidoreductase 0 0 0 0 -r_4209 Glutathione S-transferase omega-like 2 (EC 2.5.1.18) (Extracellular mutant protein 4) (Glutathione-dependent dehydroascorbate reductase) (EC 1.8.5.1) 0 0 0 0 -r_4210 urea hydro-lyase (cyanamide-forming) 0 0 0 0 -r_4211 D-ribose 5-phosphate,D-glyceraldehyde 3-phosphate pyridoxal 5-phosphate-lyase (glutamine-hydrolyzing) 0 0 0 0 -r_4212 D-ribulose 5-phosphate,D-glyceraldehyde 3-phosphate pyridoxal 5-phosphate-lyase 0 0 0 0 -r_4214 L-cysteinylglycine dipeptidase 0 0.1452 0 0.0499282 -r_4215 Cys-Gly metallodipeptidase DUG1 (EC 3.4.13.-) (Deficient in utilization of glutathione protein 1) (GSH degradosomal complex subunit DUG1) 0 0 0 0 -r_4216 riboflavin-5-phosphate phosphohydrolase -9.03249e-07 0.290398 0 -8.8e-07 -r_4217 Fe(II):oxygen oxidoreductase; Fe2+:oxygen oxidoreductase 0 0 0 0 -r_4218 D-aminoacyl-tRNA deacylase (DTD) (EC 3.1.1.96) (D-tyrosyl-tRNA(Tyr) deacylase) (Gly-tRNA(Ala) deacylase) (EC 3.1.1.-) 0 0 0 0 -r_4219 D-aminoacyl-tRNA deacylase (DTD) (EC 3.1.1.96) (D-tyrosyl-tRNA(Tyr) deacylase) (Gly-tRNA(Ala) deacylase) (EC 3.1.1.-) 0 0 0 0 -r_4220 4-nitrophenyl phosphate phosphohydrolase 0 0 0 0 -r_4221 D-Iditol:NAD+ 2-oxidoreductase 0 0 0 0 -r_4222 ATP:alpha-D-galactose 1-phosphotransferase 0 0 0 0 -r_4223 3-Hydroxy-2-methylpropanoyl-CoA hydrolase 0 0 0 0 -r_4224 Sodium transport ATPase 5 (EC 3.6.3.7) 0 0.410359 0 0.160198 -r_4225 Broad-range acid phosphatase DET1 (EC 3.1.3.-) (Decreased ergosterol transport protein 1) 0 0 0 0 -r_4226 L-Alanine:2-oxoglutarate aminotransferase -1000 1000 0 -2.27726 -r_4227 2-phenylacetamide amidohydrolase 0 0 0 0 -r_4228 Indole-3-acetamide amidohydrolase 0 0 0 0 -r_4230 Probable amidase (EC 3.5.1.4) 0 0 0 0 -r_4231 Acylamide aminohydrolase 0 0 0 0 -r_4232 ATP:D-Gluconate 6-phosphotransferase 0 0.290399 0 0.107696 -r_4233 S-Adenosyl-L-methionine:protein-C-terminal-S-farnesyl-L-cysteine O-methyltransferase 0 0 0 0 -r_4234 Phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI19 (GPI-GlcNAc transferase complex subunit GPI19) (GPI-GnT subunit GPI19) (EC 2.4.1.198) 0 0 0 0 -r_4236 (R)-lactate hydro-lyase -0.146425 1000 0 9.61626 -r_4237 Calcium-transporting ATPase 2 (EC 3.6.3.8) (Vacuolar Ca(2+)-ATPase) 0 0 0 0 -r_4238 Calcium-transporting ATPase 2 (EC 3.6.3.8) (Golgi Ca(2+)-ATPase) 0 0 0 0 -r_4239 L-arginyl-tRNA(Arg):protein arginyltransferase 0 0 0 0 -r_4240 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 (Oligosaccharyl transferase subunit STT3) (EC 2.4.99.18) 0 0 0 0 -r_4241 Mannosyl-oligosaccharide glucosidase (EC 3.2.1.106) (Processing A-glucosidase I) (Glucosidase I) 0 0 0 0 -r_4242 Initiation-specific alpha-1,6-mannosyltransferase (EC 2.4.1.232) (Outer chain elongation protein 1) 0 0 0 0 -r_4243 Alpha-1,3/1,6-mannosyltransferase ALG2 (EC 2.4.1.132) (EC 2.4.1.257) (Asparagine-linked glycosylation protein 2) (GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase) (GDP-Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase) (GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase) 0 0 0 0 -r_4244 GDP-D-mannose:D-Man-alpha-(1->3)-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-6-mannosyltransferase 0 0 0 0 -r_4245 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate 6-phosphomannohydrolase 0 0 0 0 -r_4246 Alpha-mannosidase (EC 3.2.1.24) (Alpha-D-mannoside mannohydrolase) 0 0 0 0 -r_4247 ATP:L-threonyl,bicarbonate adenylyltransferase 0 0 0 0 -r_4248 D-serine ammonia-lyase 0 0 0 0 -r_4249 O3-acetyl-L-serine:hydrogen-sulfide 2-amino-2-carboxyethyltransferase; O3-acetyl-L-serine acetate-lyase (adding hydrogen sulfide) -0.345647 0.1089 0 -0.0981159 -r_4250 Dolichyl-diphosphate phosphohydrolase 0 0 0 0 -r_4251 CTP:phosphatidate cytidyltransferase 0 0 0 0 -r_4252 Thiamine thiazole synthase (Thiazole biosynthetic enzyme) 0 0 0 0 -r_4253 dolichyl beta-D-glucosyl phosphate:D-Glc-alpha-(1->3)-D-Glc-alpha-(1->3)-D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->6)]-D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,2-glucosyltransferase 0 0 0 0 -r_4254 nitric oxide, NADH2:oxygen oxidoreductase 0 0 0 0 -r_4255 nitric oxide, NADPH2:oxygen oxidoreductase 0 0 0 0 -r_4256 Putative lipoate-protein ligase A (EC 6.3.1.20) (Altered inheritance rate of mitochondria protein 22) 0 0 0 0 -r_4258 [lipoyl-carrier protein]-L-lysine:lipoate ligase (AMP-forming) 0 0 0 0 -r_4260 Deaminated glutathione amidase (dGSH amidase) (EC 3.5.1.-) (Nitrilase homolog 1) 0 0 0 0 -r_4261 Deaminated glutathione amidase (dGSH amidase) (EC 3.5.1.-) (Nitrilase homolog 1) 0 0 0 0 -r_4262 citrate hydroxymutase -1000 1000 0 1.29249 -r_4263 Anion/proton exchange transporter GEF1 (CLC protein GEF1) (ClC-A) (ClC-Y1) (Voltage-gated chloride channel) [Cleaved into: GEF1 N-terminal; GEF1 C-terminal] 0 0 0 0 -r_4264 succinate:NAD+ oxidoreductase 0 4.9607 0 0.601021 -r_4265 nucleoside-triphosphate diphosphohydrolase 0 0 0 0 -r_4266 Inosine triphosphate pyrophosphatase (ITPase) (Inosine triphosphatase) (EC 3.6.1.9) (Hydroxylaminopurine sensitivity protein 1) (Non-canonical purine NTP pyrophosphatase) (Non-standard purine NTP pyrophosphatase) (Nucleoside-triphosphate diphosphatase) (Nucleoside-triphosphate pyrophosphatase) (NTPase) 0 0.17424 0 0.0646174 -r_4267 2'-Deoxyguanosine 5'-triphosphate diphosphohydrolase 0 0.17424 0 0.0646174 -r_4268 dTTP diphosphohydrolase 0 0.17424 0 0.0646174 -r_4269 Inosine triphosphate pyrophosphatase (ITPase) (Inosine triphosphatase) (EC 3.6.1.9) (Hydroxylaminopurine sensitivity protein 1) (Non-canonical purine NTP pyrophosphatase) (Non-standard purine NTP pyrophosphatase) (Nucleoside-triphosphate diphosphatase) (Nucleoside-triphosphate pyrophosphatase) (NTPase) 0 0 0 0 -r_4270 superoxide:superoxide oxidoreductase 0 0 0 0 -r_4271 Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Man(9)-alpha-mannosidase) 0 0 0 0 -r_4272 alpha 1,2-mannosyloligosaccharide alpha-D-mannohydrolase 0 0 0 0 -r_4273 ethylnitronate:oxygen 2-oxidoreductase (nitrite-forming) 0 0 0 0 -r_4274 O-Succinyl-L-homoserine succinate-lyase (deaminating; 2-oxobutanoate-forming) 0 0.0654197 0 0.0177818 -r_4275 Fe(II):NADP+ oxidoreductase 0 0 0 0 -r_4276 Fe(II):NADP+ oxidoreductase 0 0 0 0 -r_4277 acyl-CoA:sn-glycerol-3-phosphate 1-O-acyltransferase 0 0 0 0 -r_4278 diphthine:ammonia ligase (AMP-forming) 0 0 0 0 -r_4279 8-oxo-dGTP diphosphohydrolase 0 0 0 0 -r_4280 octanoyl-[acp]:protein N6-octanoyltransferase -1000 1000 0 1.67483e-12 -r_4281 lipoyl-[acp]:protein N6-lipoyltransferase -1000 1000 0 0 -r_4282 ATP:D-fructose-6-phosphate 2-phosphotransferase 0 0 0 0 -r_4283 ATP:D-fructose 6-phosphotransferase 0 0 0 0 -r_4284 ATP:beta-D-glucose 6-phosphotransferase 0 0 0 0 -r_4285 ATP:alpha-D-glucose 6-phosphotransferase 0 0 0 0 -r_4286 ATP:D-glucosamine 6-phosphotransferase 0 0 0 0 -r_4287 ATP:D-fructose 6-phosphotransferase 0 0 0 0 -r_4288 alpha-D-Glucose 6-phosphate ketol-isomerase 0 0 0 0 -r_4291 D-Glyceraldehyde:NAD+ oxidoreductase 0 0 0 0 -r_4292 4-Aminobutyraldehyde:NAD+ oxidoreductase -0.871198 0 0 -0.323087 -r_4293 4-aminobutanal:NAD+ 1-oxidoreductase; 4-aminobutyraldehyde:NAD+ oxidoreductase 0 0.871198 0 0.323087 -r_4294 Indole-3-acetaldehyde:NAD+ oxidoreductase 0 0 0 0 -r_4295 2-Propyn-1-al:NAD+ oxidoreductase 0 0 0 0 -r_4296 D-Glucuronolactone:NAD+ oxidoreductase 0 0 0 0 -r_4297 4-Trimethylammoniobutanal:NAD+ 1-oxidoreductase; 4-Trimethylammoniobutanal:NAD+ oxidoreductase 0 0 0 0 -r_4298 (S)-Methylmalonate semialdehyde:NAD+ oxidoreductase 0 0 0 0 -r_4299 Imidazole acetaldehyde:NAD+ oxidoreductase 0 0 0 0 -r_4300 3alpha,7alpha-Dihydroxy-5beta-cholestan-26-al:NAD+ oxidoreductase 0 0 0 0 -r_4301 5-Hydroxyindoleacetaldehyde:NAD+ oxidoreductase 0 0 0 0 -r_4302 N4-Acetylaminobutanal:NAD+ oxidoreductase 0 0 0 0 -r_4303 Fatty aldehyde dehydrogenase HFD1 (EC 1.2.1.3) 0 0 0 0 -r_4304 Fatty aldehyde dehydrogenase HFD1 (EC 1.2.1.3) 0 0 0 0 -r_4305 Chloroacetaldehyde:NAD+ oxidoreductase 0 0 0 0 -r_4306 Aldehyde:NAD+ oxidoreductase 0 0 0 0 -r_4307 farnesal:NAD+ oxidoreductase 0 0 0 0 -r_4308 Probable phospholipid-transporting ATPase DNF3 (EC 3.6.3.1) (Aminophospholipid translocase) (APT) (Phospholipid translocase) (PLT) 0 0 0 0 -r_4309 Putative esterase YMR210W (EC 3.1.1.-) 0 0 0 0 -r_4310 GDP-mannose:glycolipid 1,2-alpha-D-mannosyltransferase 0 0 0 0 -r_4311 GDP-mannose:glycolipid 1,2-alpha-D-mannosyltransferase 0 0 0 0 -r_4312 S-adenosyl-L-methionine:carnosine N-methyltransferase 0 0 0 0 -r_4313 Alpha-1,2-mannosyltransferase ALG9 (EC 2.4.1.259) (EC 2.4.1.261) (Asparagine-linked glycosylation protein 9) (Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase) (Dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase) 0 0 0 0 -r_4314 Alpha-1,2-mannosyltransferase ALG9 (EC 2.4.1.259) (EC 2.4.1.261) (Asparagine-linked glycosylation protein 9) (Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase) (Dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase) 0 0 0 0 -r_4315 Glycolate:NAD+ oxidoreductase 0 0 0 0 -r_4316 Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase (EC 2.4.1.260) (Asparagine-linked glycosylation protein 12) (Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl-alpha-1,6-mannosyltransferase) (Extracellular mutant protein 39) (Mannosyltransferase ALG12) 0 0 0 0 -r_4317 sucrose glucohydrolase 0 0 0 0 -r_4318 Isomaltose 6-alpha-D-glucanohydrolase 0 0 0 0 -r_4319 Dextrin 6-alpha-D-glucanohydrolase 0 0 0 0 -r_4320 dolichyl beta-D-glucosyl phosphate:D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->6)]-D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,3-glucosyltransferase 0 0 0 0 -r_4321 dolichyl beta-D-glucosyl phosphate:D-Glc-alpha-(1->3)-D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->6)]-D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,3-glucosyltransferase 0 0 0 0 -r_4322 GPI mannosyltransferase 4 (EC 2.4.1.-) (GPI mannosyltransferase IV) (GPI-MT-IV) 0 0 0 0 -r_4323 protein N6-(octanoyl)lysine:sulfur sulfurtransferase -1000 1000 0 1.67483e-12 -r_4324 octanoyl-[acp]:sulfur sulfurtransferase -1000 1000 0 -1.67483e-12 -r_4325 Iron sulfur cluster assembly protein 2, mitochondrial (Iron sulfur cluster scaffold protein 2) 0 0 0 0 -r_4326 thiosulfate:cyanide sulfurtranserase 0 0 0 0 -r_4327 Magnesium transporter MRS2, mitochondrial (RNA-splicing protein MRS2) 0 0 0 0 -r_4328 UDPglucose:dolichyl-phosphate beta-D-glucosyltransferase 0 0 0 0 -r_4329 Putative sulfate transporter YPR003C 0 0 0 0 -r_4330 Pyridoxine:NADP+ 4-oxidoreductase -0.181575 0 0 0 -r_4331 [1,4-(N-Acetyl-beta-D-glucosaminyl)]n glycanohydrolase 0 0 0 4.33681e-19 -r_4332 Protein PNS1 (pH nine-sensitive protein 1) 0 0.637856 0 0.323087 -r_4333 Polyphosphate phosphohydrolase 0 0 0 0 -r_4334 Copper-transporting ATPase (EC 3.6.3.54) (Cu(2+)-ATPase) 0 0 0 0 -r_4335 Endopolyphosphatase (EC 3.6.1.10) (Deoxyadenosine triphosphate phosphohydrolase) (dATP phosphohydrolase) (EC 3.6.1.-) (Exopolyphosphatase) (EC 3.6.1.11) (Phosphate metabolism protein 5) 0 0.290399 0 0.00712031 -r_4336 Monoamide of a dicarboxylic acid amidohydrolase 0 0 0 0 -r_4337 Iron-sulfur clusters transporter ATM1, mitochondrial 0 0 0 0 -r_4338 Oligo-1,6-glucosidase IMA2 (EC 3.2.1.10) (Alpha-glucosidase) (Isomaltase 2) 0 0 0 0 -r_4339 UDP-N-acetylglucosamine transporter YEA4 0 0 0 0 -r_4340 D-amino-acid N-acetyltransferase HPA3 (DNT) (EC 2.3.1.36) (EC 2.3.1.48) (Histone and other protein acetyltransferase 3) 0 0 0 0 -r_4341 glycerol 2-phosphate(2-) transport 0 0 0 0 -r_4342 Glycerol-2-phosphate phosphohydrolase 0 0 0 0 -r_4343 L-Threonine phosphate transport in via proton symport 0 0 0 0 -r_4344 acid phosphatase / phosphotransferase 0 0 0 0 -r_4345 alkaline phosphatase 0 0 0 0 -r_4346 Guanosine transport via proton symport 0 0 0 0 -r_4347 Guanosine 3'-phosphate phosphohydrolase 0 0 0 0 -r_4348 Guanosine transport via proton symport(for 3'-GMP) 0 0 0 0 -r_4349 2-Phosphoglycolate transport in/out via proton symport 0 0 0 0 -r_4350 2-phosphoglycolate phosphohydrolase 0 0 0 0 -r_4351 alkaline phosphatase 0 0 0 0 -r_4352 cysteamine S-phosphate transport via proton symport 0 0 0 0 -r_4353 Cysteamine:oxygen oxidoreductase 0 0 0 0 -r_4354 hypotaurine:NAD+ oxidoreductase 0 0 0 0 -r_4355 2-aminobutanoate:2-oxoglutarate aminotransferase 0 0.035631 0 0.0353428 -r_4356 2-aminobutyrate transport -0.035631 0 0 0 -r_4357 alkaline phosphatase 0 0 0 0 -r_4358 Uridine 2'-phosphate transport in via proton symport 0 0 0 0 -r_4359 Uridine 3'-monophosphate phosphohydrolase 0 0 0 0 -r_4360 3'-UMP transport in via proton symport 0 0 0 0 -r_4361 Gly-Met transport via proton symport 0 0 0 0 -r_4362 dipeptidase 0 0 0 0 -r_4363 R07420 0 0 0 0 -r_4364 N-phosphocreatine transport 0 0 0 0 -r_4365 creatinine transport 0 0 0 0 -r_4366 ATP:L-arginine Nomega-phosphotransferase -0.0202403 0 0 0 -r_4367 L-arginine phosphate transport in/out via proton symport -0.0202403 0 0 0 -r_4368 acid phosphatase / phosphotransferase 0 0 0 0 -r_4369 Tripolyphosphate transport in via proton symport 0 0 0 0 -r_4370 alkaline phosphatase 0 0 0 0 -r_4371 Cytidine- 2'- Monophosphate transport in via proton symport 0 0 0 0 -r_4372 cyclic phosphodiesterase 0 0 0 0 -r_4373 2',3'-Cyclic UMP transport in via proton symport 0 0 0 0 -r_4374 3-Sulfino-L-alanine 4-carboxy-lyase 0 0 0 0 -r_4375 3-Sulfino-L-alanine transport via proton antiport 0 0 0 0 -r_4376 adenosine 3'-phosphate phosphohydrolase 0 0 0 0 -r_4377 3AMP transport via diffusion (extracellular to periplasm) 0 0 0 0 -r_4378 alpha-glucosidase 0 0 0 0 -r_4379 Palatinose transport in via proton symport 0 0 0 0 -r_4380 Amino-Acid N-Acetyltransferase -0.0230241 0 0 -0.0230241 -r_4381 Acetylcysteine transport via proton symport -0.0230241 0 0 0 -r_4382 thiosulfate:ferricytochrome-c oxidoreductase 0 0 0 0 -r_4383 etrathionate transport via diffusion 0 0 0 0 -r_4384 D-Gluconate:NADP+ 5-oxidoreductase 0 0 0 0 -r_4385 5-Dehydro-D-gluconate transport via proton symport 0 0 0 0 -r_4386 dipeptidase 0 0 0 0 -r_4387 ala-L-asp-L transport via proton symport 0 0 0 0 -r_4388 cyclic phosphodiesterase 0 0 0 0 -r_4389 2',3'-Cyclic CMP transport in via proton symport 0 0 0 0 -r_4390 beta-glucosidase (methyl-alpha-D-glucoside) 0 0 0 0 -r_4391 Methanol diffusion 0 0 0 0 -r_4392 alpha-Methyl-D-glucoside transport via proton symport 0 0 0 0 -r_4393 ATP:D-tagatose 6-phosphotransferase 0 0 0 0 -r_4394 D-tagatose 6-phosphate 4-epimerase 0 0 0 0 -r_4395 D-tagatose uptake via diffusion 0 0 0 0.00302287 -r_4396 Acetoacetate:CoA ligase (AMP-forming) 0 0.0354813 0 0.000284804 -r_4397 N-Acyl-Aliphatic-L-Amino Acid Amidohydrolase -0.01526 0 0 -0.00889088 -r_4398 Ala-Gln transport via proton symport 0 0 0 0 -r_4399 L-alanyl-L-glutamate transport in via proton symport 0 0 0 0 -r_4400 Maltodextrin glucosidase (maltotriose) 0 0 0 0 -r_4401 Ala-Thr transport via proton symport 0 0 0 0 -r_4402 Ala-Thr transport via proton symport (extracellular to cytosol) 0 0 0 0 -r_4403 Triphosphate phosphohydrolase 0 0 0 0 -r_4404 Gly-Asn transport via proton symport (extracellular to cytosol) 0 0 0 0 -r_4405 glycerol 1-phosphate transport 0 0 0 0 -r_4406 D-O-Phosphoserine transport in/out via proton symport 0 0 0 0 -r_4407 D-O-Phosphoserine phosphohydrolase 0 0 0 0 -r_4408 L-alanyl-L-glutamate transport in via proton symport 0 0 0 0 -r_4409 L-alanyl-gamma-L-glutamate peptidase 0 0 0 0 -r_4410 3-oxalomalate glyoxylate-lyase (oxaloacetate-forming) -0.026487 0 0 -0.0241502 -r_4411 L-cysteate bisulfite-lyase (deaminating) 0 0 0 0 -r_4412 cyclic phosphodiesterase 0 0 0 0 -r_4413 deoxynucleotide 3'-phosphatase 0 0 0 0 -r_4414 cytosol nonspecific dipeptidase 0 0 0 0 -r_4415 Cytosol non-specific dipeptidase 0 0 0 0 -r_4416 Cytosol non-specific dipeptidase 0 0 0 0 -r_4417 Cytosol non-specific dipeptidase 0 0 0 0 -r_4418 Cytosol non-specific dipeptidase 0 0 0 0 -r_4419 L-Cysteate transport via proton symport 0 0 0 0 -r_4420 alpha-glucosidase 0 0 0 -346.949 -r_4421 2-Hydroxyethanesulfonate transport via proton symport 0 0 0 0 -r_4422 3-Oxalomalate transport via proton symport -0.026487 0 0 0 -r_4423 Gly-Met transport via proton symport 0 0 0 0 -r_4424 Gly-Gln transport via proton symport 0 0 0 0 -r_4425 Gly-Gln transport via proton symport 0 0 0 0 -r_4426 Ala-Gln transport via proton symport 0 0 0 0 -r_4427 N-Acetylmethionine transport via proton symport -0.01526 0 0 0 -r_4428 Phosphotyrosine transport via proton symport 0 0 0 0 -r_4429 Ala-His transport via proton symport 0 0 0 0 -r_4430 Ala-His transport via proton symport 0 0 0 0 -r_4431 ala-L-asp-L transport via proton symport 0 0 0 0 -r_4432 FMNH2-dependent alkanesulfonate monooxygenase 0 0 0 0 -r_4433 thymidine 3-monophosphate transport 0 0 0 0 -r_4434 thymidine 5-monophosphate transport 0 0 0 0 -r_4435 glycerol-1-phosphate phosphohydrolase 0 0 0 0 -r_4436 nucleotide-specific phosphatase (thymidine 5'-monophosphate) 0 0 0 0 -r_4437 Gly-Glu transport via proton symport (extracellular to cytosol) 0 0 0 0 -r_4438 Gly-Glu transport via proton symport (cytosol to vacuole) 0 0 0 0 -r_4439 cytosol nonspecific dipeptidase 0 0 0 0 -r_4440 L-methionine transport, vacuoluar 0 0.0139613 0 0.00889088 -r_4441 L-threonine transport, vacuoluar 0 0 0 0 -r_4442 cysteamine exchange 0 0 0 0 -r_4443 23cGMP transport via diffusion (extracellular to periplasm) 0 0 0 0 -r_4444 D-Glycerate 2-phosphate transport in/out via proton symport -0.0529739 0 0 0 -r_4445 3-Phospho-D-glycerate transport in/out via proton symport -0.0529739 0 0 0 -r_4446 D-glucose 1-phosphate transport via diffusion -0.025566 0 0 0 -r_4447 carbamoyl phosphate nuclear transport via diffusion -0.0791998 0 0 0 -r_4448 Met-Ala transport via proton symport (extracellular to cytosol) -0.0139613 0 0 -0.00889088 -r_4449 Met-Ala transport via proton symport (cytosol to vacuole) -0.0139613 0 0 -0.00889088 -r_4450 O-Phospho-L-serine transport in via proton symport -0.0529739 0 0 0 -r_4451 GMP transport via proton symport -0.0141605 0 0 0 -r_4452 myo-inositol phosphate transport via diffusion (extracellular to periplasm) 0 0 0 0 -r_4453 D-glucose 6-phosphate transport -0.025566 0 0 0 -r_4454 UMP transport -0.0167527 0 0 0 -r_4455 Phosphoenolpyruvate transport in via proton symport -0.0529739 0 0 0 -r_4456 Mannose 6-phosphate transport via diffusion (extracellular to periplasm) -0.025566 0 0 0 -r_4457 O-Phosphoryl-Ethanolamine transport in via proton symport 0 0 0 0 -r_4458 6-Phospho-D-gluconate transport in/out via proton symport -0.026487 0 0 0 -r_4459 MAN1P transport in/out via proton symport -0.025988 0 0 0 -r_4460 Pyrophosphate transport in via proton symport -0.992177 0 -0.351536 -0.191338 -r_4461 Choline phosphate intracellular transport -0.0149683 0 0 0 -r_4462 thiosulfate transport 0 0 0 0 -r_4463 AMP transport in/out via proton symport -0.0141863 0 0 0 -r_4464 23cAMP transport via diffusion (extracellular to periplasm) 0 0 0 0 -r_4465 Adenosine- 2'-Monophosphate transport in via proton symport 0 0 0 0 -r_4466 CMP transport in/out via proton symport -0.0157944 0 0 0 -r_4467 D-glucosamine transport via diffusion (extracellular to periplasm) 0 0 0 0 -r_4468 2-deoxy-D-ribose transport 0 0 0 0 -r_4469 L-Citrulline transport in via proton symport -0.0232266 0 0 -0.00360413 -r_4470 Dihydroxyacetone transport via facilitated diffusion -0.051132 0 0 0 -r_4471 Ala-Leu transport via proton symport (extracellular to cytosol) -0.01627 0 0 -0.01627 -r_4472 Ala-Leu transport via proton symport (cytosol to vacuole) -0.01627 0 0 -0.01627 -r_4473 L-alanylglycine transport via proton antiport -0.0317844 0 0 -0.0635687 -r_4474 L-alanylglycine transport via proton antiport -0.0317844 0 0 0 -r_4475 N-acetyl-L-glutamate transport -0.0227031 0 0 0 -r_4476 N-acetyl-L-glutamate transport -0.0227031 0 0 0 -r_4477 Lipoamide transport via proton symport 0 0 0 0 -r_4478 L-methionine S-oxide transport via diffusion (extracellular) -0.019394 0 0 0 -r_4479 Gly-Asn transport via proton symport 0 0 0 0 -r_4480 Cysteamine transport via proton antiport 0 0 0 0 -r_4481 Hydrogen sulfide oxidation 0 0.0345823 0 0.0345823 -r_4482 L-alanine transport in via proton symport 0 0.0317844 0 0.00128924 -r_4483 Glycine transport (vacuole) 0 0.0317844 0 0 -r_4484 O4-succinyl-L-homoserine:hydrogen sulfide S-(3-amino-3-carboxypropyl)transferase; O-succinyl-L-homoserine succinate-lyase (adding hydrogen sulfide) -0.351828 0.222924 0 -0.144854 -r_4485 4-Hydroxyphenylpyruvate:oxygen oxidoreductase (hydroxylating,decarboxylating) 0 0.0354813 0 0.000284804 -r_4486 Homogentisate:oxygen 1,2-oxidoreductase (decyclizing) 0 0.0354813 0 0.000284804 -r_4487 4-Maleylacetoacetate cis-trans-isomerase 0 0.0354813 0 0.000284804 -r_4488 4-fumarylacetoacetate fumarylhydrolase 0 0.0354813 0 0.000284804 -r_4489 L-arabinitol:NAD+ 4-oxidoreductase (L-xylulose-forming) 0 0 0 0 -r_4490 Xylitol:NADP+ 4-oxidoreductase (L-xylulose-forming) 0 0 0 0 -r_4491 arabinose reductase (D-arabinose) 0 0 0 0 -r_4492 D-arabinitol:NAT 4-oxidoreductase 0 0 0 0 -r_4493 Acetoacetate transport via diffusion -0.0243519 0 0 0 -r_4494 methanol exchange 0 0 0 0 -r_4495 alkaline phosphatase 0 0 0 0 -r_4496 Ala-Gly exchange 0 0.0317844 0 0.0317844 -r_4497 3-oxalomalate(3-) exchange 0 0.026487 0 0.0241502 -r_4498 6-O-alpha-D-glucopyranosyl-D-fructofuranose exchange 0 0 0 0 -r_4499 5-dehydro-D-gluconate exchange 0 0 0 0 -r_4500 D-tagatose exchange 0 0 0 0 -r_4501 turanose exchange 0 0 0 0 -r_4502 D-glucose 6-phosphate exchange 0 0.025566 0 0.025566 -r_4503 alpha-maltotriose exchange 0 0 0 0 -r_4504 D-glucose 1-phosphate exchange 0 0.025566 0 0.025566 -r_4505 methyl alpha-D-glucopyranoside exchange 0 0 0 0 -r_4506 D-Glucosamine exchange 0 0 0 0 -r_4507 glycerone exchange 0 0.051132 0 0.00640275 -r_4508 Ala-Gln exchange 0 0 0 0 -r_4509 Ala-Leu exchange 0 0.01627 0 0.01627 -r_4510 Gly-Gln exchange 0 0 0 0 -r_4511 Ala-His exchange 0 0 0 0 -r_4512 Gly-Asn exchange 0 0 0 0 -r_4513 Ala-Glu exchange 0 0 0 0 -r_4514 Gly-Met exchange 0 0 0 0 -r_4515 Ala-Asp exchange 0 0 0 0 -r_4516 Gly-Glu exchange 0 0 0 0 -r_4517 Ala-Thr exchange 0 0 0 0 -r_4518 Met-Ala exchange 0 0.0139613 0 0.00889088 -r_4519 L-citrulline exchange 0 0.0232266 0 0.00360413 -r_4520 2-aminobutanoate exchange 0 0.035631 0 0.0353428 -r_4521 choline phosphate exchange 0 0.0149683 0 0.000111964 -r_4522 glycerol 1-phosphate exchange 0 0 0 0 -r_4523 2-phospho-D-glyceric acid exchange 0 0.0529739 0 0.0529739 -r_4524 GMP exchange 0 0.0141605 0 0.00329827 -r_4525 3-phospho-serine exchange 0 0.0529739 0 0.0341209 -r_4526 O-phosphonatooxy-D-serine(2-) exchange 0 0 0 0 -r_4527 diphosphate exchange 0 0.992177 0.191338 0.682965 -r_4528 triphosphate exchange 0 0 0 0 -r_4529 phosphoenolpyruvate exchange 0 0.0529739 0 0.0529739 -r_4530 N(omega)-phospho-L-arginine exchange 0 0.0202403 0 0.00360413 -r_4531 carbamoyl phosphate exchange 0 0.0791998 0 0.0293715 -r_4532 O-phosphoethanolamine exchange 0 0 0 0 -r_4533 cysteamine S-phosphate exchange 0 0 0 0 -r_4534 guanosine 2'-monophosphate exchange 0 0 0 0 -r_4535 glycerol 2-phosphate(2-) exchange 0 0 0 0 -r_4536 3'-GMP exchange 0 0 0 0 -r_4537 2-phosphoglycolate exchange 0 0 0 0 -r_4538 6-phospho-D-gluconate exchange 0 0.026487 0 0.026487 -r_4539 D-mannose 6-phosphate exchange 0 0.025566 0 0.025566 -r_4540 2',3'-cyclic GMP exchange 0 0 0 0 -r_4541 O(4)-phospho-L-tyrosine exchange 0 0 0 0 -r_4542 O-phospho-L-threonine exchange 0 0 0 0 -r_4543 3-phosphonato-D-glycerate(3-) exchange 0 0.0529739 0 0.0529739 -r_4544 adenosine 2'-phosphate exchange 0 0 0 0 -r_4545 3'-AMP exchange 0 0 0 0 -r_4546 2',3'-cyclic AMP exchange 0 0 0 0 -r_4547 D-mannose 1-phosphate exchange 0 0.025988 0 0.025988 -r_4548 AMP exchange 0 0.0141863 0 0.00665195 -r_4549 N(alpha)-acetyl-L-methionine exchange 0 0.01526 0 0.00889088 -r_4550 L-Methionine S-oxide exchange 0 0.019394 0 0.00889088 -r_4551 3-sulfino-L-alanine exchange 0 0 0 0 -r_4552 N-acetyl-L-cysteine exchange 0 0.0230241 0 0.0230241 -r_4553 L-cysteate exchange 0 0 0 0 -r_4554 2-hydroxyethane-1-sulfonate exchange 0 0 0 0 -r_4555 acetoacetate exchange 0 0.0243519 0 0.000284804 -r_4556 N-acetyl-L-glutamate exchange 0 0.0227031 0 0.0227031 -r_4557 UMP exchange 0 0.0167527 0 0.00475135 -r_4558 CMP exchange 0 0.0157944 0 0.00475135 -r_4559 thymidine 5'-monophosphate exchange 0 0 0 0 -r_4560 thymidine 3'-monophosphate exchange 0 0 0 0 -r_4561 cytidine 2'-phosphate exchange 0 0 0 0 -r_4562 uridine 2'-phosphate exchange 0 0 0 0 -r_4563 3'-UMP exchange 0 0 0 0 -r_4564 2',3'-cyclic CMP exchange 0 0 0 0 -r_4565 2',3'-cyclic UMP exchange 0 0 0 0 -r_4567 6-phosphogluconate phosphatase 0 0.290399 0 0.107696 -r_4568 R06790 0 0 0 0 -r_4569 Carboxylic ester hydrolases 0 0 0 0 -r_4570 phosphoglycerate dehydrogenase -0.0883167 0 0 0.21682 -r_4571 seed:rxn00681 0 0.0883167 0 0.0676238 -r_4572 beta-alanine:2-oxoglutarate aminotransferase 0 0.0401343 0 0.000144153 -r_4573 3-Oxopropanoate:NAD+ oxidoreductase (decarboxylating, CoA-acetylating) 0 0.0383668 0 0.000144153 -r_4574 3-Oxopropanoate:NADP+ oxidoreductase (decarboxylating, CoA-acetylating) 0 0.0401343 0 0.000144153 -r_4575 3-oxopropanoate carboxy-lyase 0 0.0326205 0 0.000144153 -r_4581 (2R,3S)-3-methylmalate:NAD+ oxidoreductase 0 0.0883166 0 0.0676181 -r_4582 malate/beta-methylmalate synthase 0 0.0883166 0 0.0676181 -r_4583 palmitoyl-CoA hydrolase 0 0.17424 0 0.0646174 -r_4584 long-chain-fatty-acid---CoA ligase 0 0.17424 0 0.0646599 -r_4585 a-galactosidase (stachyose) 0 0 0 0 -r_4586 stachyose synthase 0 0 0 0 -r_4587 Ca(2+) transport 1.9096e-05 1.96005e-05 1.9096e-05 1.9243e-05 -r_4588 chloride transport 0.00011352 0.000116519 0.00011352 0.000114394 -r_4589 Cu2(+) transport 5.7992e-05 5.95241e-05 5.7992e-05 5.84385e-05 -r_4590 Mn(2+) transport 0.00024024 0.000246587 0.00024024 0.00024209 -r_4591 Zn(2+) transport 6.5824e-05 6.7563e-05 0 0.000132155 -r_4592 Mg(2+) transport 0.000109344 0.000112233 0 0.000220371 -r_4593 chloride exchange -0.000116519 -0.00011352 -0.000114394 -0.00011352 -r_4594 Cu2(+) exchange -5.95241e-05 -5.7992e-05 -5.84385e-05 -5.7992e-05 -r_4595 Mn(2+) exchange -0.000246587 -0.00024024 -0.00024209 -0.00024024 -r_4596 Zn(2+) exchange -6.7563e-05 -6.5824e-05 -6.63308e-05 -6.5824e-05 -r_4597 Mg(2+) exchange -0.000112233 -0.000109344 -0.000110186 -0.000109344 -r_4598 cofactor pseudoreaction 0.088 0.0903249 0.088 0.0886775 -r_4599 ion pseudoreaction 0.088 0.0903249 0.088 0.0886775 -r_4600 Ca(2+) exchange -1.96005e-05 -1.9096e-05 -1.9243e-05 -1.9096e-05 -r_4601 3-(4-hydroxyphenyl)pyruvate transport 0 0 0 0 -r_4602 acetate transport 0 0 0 0 -r_4603 ADP-ribose transport 0 0 0 0 -r_4604 farnesyl diphosphate transport 0 0 0 0 -r_4605 nicotinate transport 0 0 0 0 -r_4606 O-phosphoethanolamine transport 0 0 0 0 -r_4607 phosphate transport -0.290399 0 0 0 -r_4608 propionyl-CoA transport 0 0.0490613 0 0.0190819 -r_4609 UDP transport 0 0.290399 0 0 -r_4610 UDP transport -0.294736 0 0 0 -r_4611 UMP transport -0.290399 0 0 0 -r_4612 TRX1 disulphide transport 0 0 0 0 -r_4613 oleate transport 0 0 0 0 -r_4614 (R)-acetoin transport 0 0 0 0 -r_4615 L-glutamine transport 0 0 0 0 -r_4616 UMP transport 0 0 0 0 -r_4617 S-adenosyl-L-methionine transport 0 0 0 0 -r_4618 glutathione transport 0 0 0 0 -r_4619 ATP transport 0 0 0 0 -r_4620 D-mannose 6-phosphate transport 0 0 0 0 -r_4621 O-acetyl-L-serine transport -0.345647 0.1089 0 0.00437391 -r_4622 hydrogen sulfide transport 0 0 0 0 -r_4623 L-cysteinylglycine transport 0 0 0 0 -r_4624 ATP transport 0 0 0 0 -r_4625 thiosulfate transport 0 0 0 0 -r_4626 sulphite transport 0 0 0 0 -r_4627 UDP-D-glucose transport 0 0 0 0 -r_4628 UDP-N-acetyl-alpha-D-glucosamine transport 0 0 0 0 -r_4629 alcohol acyltransferase (hexanoyl-CoA) 0 0.00912366 0 0.00560805 -r_4630 alcohol acyltransferase (octanoyl-CoA) 0 0.00788956 0 0.00513869 -r_4631 alcohol acyltransferase (butyryl-CoA) 0 0.0105262 0 0.00573448 -r_4632 alcohol acetyltransferase (hexanol) 0 0 0 0 -r_4633 alcohol acyltransferase (decanoyl-CoA) 0 0.00707446 0 0.0100003 -r_4634 ethyl hexanoate transport, mitochondrial 0 0.00912366 0 0 -r_4635 ethyl octanoate transport, mitochondrial 0 0.00788956 0 0 -r_4636 ethyl butanoate transport, mitochondrial 0 0.0105262 0 0 -r_4637 hexyl acetate transport, mitochondrial 0 0 0 0 -r_4638 ethyl decanoate transport, mitochondrial 0 0.00707446 0 0.00500016 -r_4639 ethyl hexanoate transport 0 0.00912366 0 0 -r_4640 ethyl octanoate transport 0 0.00788956 0 0 -r_4641 ethyl butanoate transport 0 0.0105262 0 0 -r_4642 hexyl acetate transport 0 0 0 0 -r_4643 ethyl decanoate transport 0 0.00707446 0 0.00500016 -r_4644 ethyl hexanoate exchange 0 0.00912366 0 0.00560805 -r_4645 ethyl octanoate exchange 0 0.00788956 0 0.00513869 -r_4646 ethyl butanoate exchange 0 0.0105262 0 0.00573448 -r_4647 hexyl acetate exchange 0 0 0 0 -r_4648 ethyl decanoate exchange 0 0.00707446 0 0.00500016 -r_4649 mitochondrial ethanol O-acetyltransferase 0 0.35847 0 0.106603 -r_4650 ethyl acetate transport, mitochondrial 0 0.35847 0 0.106603 -r_4651 pyruvate decarboxylase (aldedyde-forming) 0 0.0688378 0 0.0987607 -r_4652 aldehyde dehydrogenase (1-propanol, NAD) 0 0.0364562 0 0.0357939 -r_4653 aldehyde dehydrogenase (1-propanol, NAD) 0 0 0 0 -r_4654 aldehyde dehydrogenase (1-propanol, NADP) 0 0.035631 0 0.0353428 -r_4655 1-propyl alcohol transport, mitochondrial 0 0 0 0 -r_4656 propanal transport, cytosol 0 0.0399718 0 0 -r_4657 1-propyl alcohol transport, cytosol 0 0.0364562 0 0 -r_4658 propanal exchange 0 0.0399718 0 0.0394612 -r_4659 propanol exchange 0 0.0364562 0 0.0357772 -r_4660 2-oxo acid decarboxylase 0 0.0142427 0 0 -r_4661 aldehyde dehydrogenase (methionol, NAD) 0 0.0137697 0 0.000321746 -r_4662 aldehyde dehydrogenase (methionol, NAD) 0 0 0 0 -r_4663 aldehyde dehydrogenase (methionol, NADP) 0 0.0136503 0 0.000160873 -r_4664 methionol transport, mitochondrial 0 0 0 0 -r_4665 methional transport, cytosol 0 0.0142427 0 0 -r_4666 methionol transport, cytosol 0 0.0137697 0 0 -r_4667 methional exchange 0 0.0142427 0 0.000160873 -r_4668 methionol exchange 0 0.0137697 0 0.000160873 -r_4669 pyruvate decarboxylase (hydroxy-phenyl) 0 0.017044 0 0.000854412 -r_4670 aldehyde dehydrogenase (tyrosol, NAD) 0 0.0163708 0 0.000569608 -r_4671 aldehyde dehydrogenase (tyrosol, NAD) 0 0 0 0 -r_4672 aldehyde dehydrogenase (tyrosol, NADP) 0 0.0162023 0 0.000284804 -r_4673 tyrosol transport, mitochondrial 0 0 0 0 -r_4674 (4-hydroxyphenyl)acetaldehyde transport, cytosol 0 0.017044 0 0 -r_4675 tyrosol transport, cytosol 0 0.0163708 0 0 -r_4676 (4-hydroxyphenyl)acetaldehyde exchange 0 0.017044 0 0.000284804 -r_4677 tyrosol exchange 0 0.0163708 0 0.000284804 -r_4678 aldehyde dehydrogenase -0.0312485 0.055975 0 12.8742 -r_4679 short-chain-fatty-acid-CoA ligase (propionate) -0.0312485 0.055975 0 -0.00711028 -r_4680 alcohol acyltransferase (propionyl-CoA) 0 0.0234692 0 0.0468299 -r_4681 propionyl-CoA transport, mitochondrial -0.0312485 0.055975 0 0 -r_4682 butyryl-CoA transport, mitochondrial 0 0.0105262 0 0.00573448 -r_4683 hexanoyl-CoA transport, mitochondrial 0 0.00912366 0 0 -r_4684 octanoyl-CoA transport, mitochondrial 0 0.00788956 0 0.00513869 -r_4685 decanoyl-CoA transport, mitochondrial 0 0.00707446 0 0.00500016 -r_4686 propionate transport, cytosol -0.055975 0.0312485 0 0 -r_4687 alcohol acetyltransferase (tyrosol) 0 0.0133012 0 0.000284804 -r_4688 tyrosyl acetate transport 0 0.0133012 0 0.000284804 -r_4689 tyrosyl acetate exchange 0 0.0133012 0 0.000284804 -r_4690 alcohol acetyltransferase (methionol) 0 0.011532 0 0.000160873 -r_4691 methionyl acetate transport 0 0.011532 0 0.000160873 -r_4692 methionyl acetate exchange 0 0.011532 0 0.000160873 -r_4693 alcohol acetyltransferase (propanol) 0 0.0240807 0 0.0240807 -r_4694 propyl acetate transport 0 0.0240807 0 0.0240807 -r_4695 propyl acetate exchange 0 0.0240807 0 0.0240807 -r_4697 ethyl propionate transport, mitochondrial 0 0.0234692 0 0 -r_4698 ethyl propionate transport 0 0.0234692 0 0.0234327 -r_4699 ethyl propionate exchange 0 0.0234692 0 0.0234149 -r_4700 hydrogen sulfide transport 0 0.0599126 0 0.0462448 -r_4701 L-cysteine hydrogen-sulfide-lyase (deaminating; pyruvate-forming) -0.345647 0.1089 0 -0.0981159 -r_4702 L-cysteine:2-oxoglutarate aminotransferase -0.139587 0.37393 0 0.0463097 -r_4703 3-mercaptopyruvate sulfurtransferase -0.139587 0.37393 0 0.0226831 -r_4704 alkanesulfonate transport 0 0 0 0 -r_4705 taurocholate transport 0 0 0 0 -r_4706 alkanesulfonate dioxygenase 0 0 0 0 -r_4707 trithionate thiosulfohydrolase 0 0 0 0 -r_4708 hydrogen sulfide exchange 0 0.0599126 0 0.0462448 -r_4709 alkanesulfonate exchange 0 0 0 0 -r_4710 taurocholate exchange 0 0 0 0 From d9b7cd5fcaaf45839f64363a129718a5b681fe98 Mon Sep 17 00:00:00 2001 From: edkerk Date: Tue, 27 Jun 2023 01:43:13 +0200 Subject: [PATCH 5/9] fix: getStandardKcat no standard gene in light-ec --- .../gather_kcats/getStandardKcat.html | 265 +++++++++--------- src/geckomat/gather_kcats/getStandardKcat.m | 13 +- 2 files changed, 138 insertions(+), 140 deletions(-) diff --git a/doc/src/geckomat/gather_kcats/getStandardKcat.html b/doc/src/geckomat/gather_kcats/getStandardKcat.html index 6cbfd1679..5eea311c9 100644 --- a/doc/src/geckomat/gather_kcats/getStandardKcat.html +++ b/doc/src/geckomat/gather_kcats/getStandardKcat.html @@ -247,140 +247,139 @@

    SOURCE CODE ^% Only add if not geckoLight & getStandardKcat was not run earlier 0152 if ~any(strcmp(model.mets,'prot_standard')) -0153 % Add a new gene to be consistent with ec field named standard -0154 proteinStdGenes.genes = 'standard'; -0155 if isfield(model,'geneShortNames') -0156 proteinStdGenes.geneShortNames = 'std'; -0157 end -0158 model = addGenesRaven(model, proteinStdGenes); -0159 -0160 if ~model.ec.geckoLight -0161 % Add a new metabolite named prot_standard -0162 proteinStdMets.mets = 'prot_standard'; -0163 proteinStdMets.metNames = proteinStdMets.mets; -0164 proteinStdMets.compartments = 'c'; -0165 if isfield(model,'metNotes') -0166 proteinStdMets.metNotes = 'Standard enzyme-usage pseudometabolite'; -0167 end -0168 model = addMets(model, proteinStdMets); -0169 -0170 % Add a protein usage reaction if not a light version -0171 proteinStdUsageRxn.rxns = {'usage_prot_standard'}; -0172 proteinStdUsageRxn.rxnNames = proteinStdUsageRxn.rxns; -0173 proteinStdUsageRxn.mets = {proteinStdMets.mets, 'prot_pool'}; -0174 proteinStdUsageRxn.stoichCoeffs = [-1, 1]; -0175 proteinStdUsageRxn.lb = -1000; -0176 proteinStdUsageRxn.ub = 0; -0177 proteinStdUsageRxn.grRules = proteinStdGenes.genes; -0178 -0179 model = addRxns(model, proteinStdUsageRxn); -0180 end -0181 % Update .ec structure in model -0182 model.ec.genes(end+1) = {'standard'}; -0183 model.ec.enzymes(end+1) = {'standard'}; -0184 model.ec.mw(end+1) = standardMW; -0185 model.ec.sequence(end+1) = {''}; -0186 % Additional info -0187 if isfield(model.ec,'concs') -0188 model.ec.concs(end+1) = nan(); -0189 end -0190 -0191 % Expand the enzyme rxns matrix -0192 model.ec.rxnEnzMat = [model.ec.rxnEnzMat, zeros(length(model.ec.rxns), 1)]; % 1 new enzyme -0193 model.ec.rxnEnzMat = [model.ec.rxnEnzMat; zeros(length(rxnsMissingGPR), length(model.ec.enzymes))]; % new rxns -0194 end -0195 numRxns = length(model.ec.rxns); -0196 stdMetIdx = find(strcmpi(model.ec.enzymes, 'standard')); -0197 -0198 % Remove previous standard kcat assignment -0199 oldStandardEnz = find(strcmp(model.ec.source,'standard')); -0200 if ~isempty(oldStandardEnz) -0201 model.ec.rxns(oldStandardEnz) = []; -0202 model.ec.kcat(oldStandardEnz) = []; -0203 model.ec.source(oldStandardEnz) = []; -0204 model.ec.notes(oldStandardEnz) = []; -0205 model.ec.eccodes(oldStandardEnz) = []; -0206 model.ec.rxnEnzMat(oldStandardEnz,:) = []; -0207 end -0208 -0209 for i = 1:numel(rxnsMissingGPR) -0210 rxnIdx = rxnsMissingGPR(i); -0211 -0212 % Update .ec structure in model -0213 if ~model.ec.geckoLight -0214 model.ec.rxns(end+1) = model.rxns(rxnIdx); -0215 % Add prefix in case is light version -0216 else -0217 model.ec.rxns{end+1} = ['001_' model.rxns{rxnIdx}]; -0218 end -0219 -0220 if ~standard -0221 kcatSubSystemIdx = strcmpi(enzSubSystem_names, model.subSystems{rxnIdx}(1)); -0222 if all(kcatSubSystemIdx) -0223 model.ec.kcat(end+1) = kcatSubSystem(kcatSubSystemIdx); -0224 else -0225 model.ec.kcat(end+1) = standardKcat; -0226 end -0227 else -0228 model.ec.kcat(end+1) = standardKcat; -0229 end -0230 -0231 model.ec.source(end+1) = {'standard'}; -0232 model.ec.notes(end+1) = {''}; -0233 model.ec.eccodes(end+1) = {''}; -0234 -0235 % Update the enzyme rxns matrix -0236 model.ec.rxnEnzMat(numRxns+i, stdMetIdx) = 1; -0237 end -0238 % Get the rxns identifiers of the updated rxns -0239 rxnsMissingGPR = model.rxns(rxnsMissingGPR); -0240 -0241 if fillZeroKcat -0242 zeroKcat = model.ec.kcat == 0 | isnan(model.ec.kcat); -0243 model.ec.kcat(zeroKcat) = standardKcat; -0244 model.ec.source(zeroKcat) = {'standard'}; -0245 rxnsNoKcat = model.ec.rxns(zeroKcat); -0246 else -0247 rxnsNoKcat = []; +0153 if ~model.ec.geckoLight +0154 % Add a new gene to be consistent with ec field named standard +0155 proteinStdGenes.genes = 'standard'; +0156 if isfield(model,'geneShortNames') +0157 proteinStdGenes.geneShortNames = 'std'; +0158 end +0159 model = addGenesRaven(model, proteinStdGenes); +0160 % Add a new metabolite named prot_standard +0161 proteinStdMets.mets = 'prot_standard'; +0162 proteinStdMets.metNames = proteinStdMets.mets; +0163 proteinStdMets.compartments = 'c'; +0164 if isfield(model,'metNotes') +0165 proteinStdMets.metNotes = 'Standard enzyme-usage pseudometabolite'; +0166 end +0167 model = addMets(model, proteinStdMets); +0168 +0169 % Add a protein usage reaction if not a light version +0170 proteinStdUsageRxn.rxns = {'usage_prot_standard'}; +0171 proteinStdUsageRxn.rxnNames = proteinStdUsageRxn.rxns; +0172 proteinStdUsageRxn.mets = {proteinStdMets.mets, 'prot_pool'}; +0173 proteinStdUsageRxn.stoichCoeffs = [-1, 1]; +0174 proteinStdUsageRxn.lb = -1000; +0175 proteinStdUsageRxn.ub = 0; +0176 proteinStdUsageRxn.grRules = proteinStdGenes.genes; +0177 +0178 model = addRxns(model, proteinStdUsageRxn); +0179 end +0180 % Update .ec structure in model +0181 model.ec.genes(end+1) = {'standard'}; +0182 model.ec.enzymes(end+1) = {'standard'}; +0183 model.ec.mw(end+1) = standardMW; +0184 model.ec.sequence(end+1) = {''}; +0185 % Additional info +0186 if isfield(model.ec,'concs') +0187 model.ec.concs(end+1) = nan(); +0188 end +0189 +0190 % Expand the enzyme rxns matrix +0191 model.ec.rxnEnzMat = [model.ec.rxnEnzMat, zeros(length(model.ec.rxns), 1)]; % 1 new enzyme +0192 model.ec.rxnEnzMat = [model.ec.rxnEnzMat; zeros(length(rxnsMissingGPR), length(model.ec.enzymes))]; % new rxns +0193 end +0194 numRxns = length(model.ec.rxns); +0195 stdMetIdx = find(strcmpi(model.ec.enzymes, 'standard')); +0196 +0197 % Remove previous standard kcat assignment +0198 oldStandardEnz = find(strcmp(model.ec.source,'standard')); +0199 if ~isempty(oldStandardEnz) +0200 model.ec.rxns(oldStandardEnz) = []; +0201 model.ec.kcat(oldStandardEnz) = []; +0202 model.ec.source(oldStandardEnz) = []; +0203 model.ec.notes(oldStandardEnz) = []; +0204 model.ec.eccodes(oldStandardEnz) = []; +0205 model.ec.rxnEnzMat(oldStandardEnz,:) = []; +0206 end +0207 +0208 for i = 1:numel(rxnsMissingGPR) +0209 rxnIdx = rxnsMissingGPR(i); +0210 +0211 % Update .ec structure in model +0212 if ~model.ec.geckoLight +0213 model.ec.rxns(end+1) = model.rxns(rxnIdx); +0214 % Add prefix in case is light version +0215 else +0216 model.ec.rxns{end+1} = ['001_' model.rxns{rxnIdx}]; +0217 end +0218 +0219 if ~standard +0220 kcatSubSystemIdx = strcmpi(enzSubSystem_names, model.subSystems{rxnIdx}(1)); +0221 if all(kcatSubSystemIdx) +0222 model.ec.kcat(end+1) = kcatSubSystem(kcatSubSystemIdx); +0223 else +0224 model.ec.kcat(end+1) = standardKcat; +0225 end +0226 else +0227 model.ec.kcat(end+1) = standardKcat; +0228 end +0229 +0230 model.ec.source(end+1) = {'standard'}; +0231 model.ec.notes(end+1) = {''}; +0232 model.ec.eccodes(end+1) = {''}; +0233 +0234 % Update the enzyme rxns matrix +0235 model.ec.rxnEnzMat(numRxns+i, stdMetIdx) = 1; +0236 end +0237 % Get the rxns identifiers of the updated rxns +0238 rxnsMissingGPR = model.rxns(rxnsMissingGPR); +0239 +0240 if fillZeroKcat +0241 zeroKcat = model.ec.kcat == 0 | isnan(model.ec.kcat); +0242 model.ec.kcat(zeroKcat) = standardKcat; +0243 model.ec.source(zeroKcat) = {'standard'}; +0244 rxnsNoKcat = model.ec.rxns(zeroKcat); +0245 else +0246 rxnsNoKcat = []; +0247 end 0248 end -0249 end -0250 -0251 function Cflat = flattenCell(C,strFlag) -0252 %FLATTENCELL Flatten a nested column cell array into a matrix cell array. -0253 % -0254 % CFLAT = FLATTENCELL(C) takes a column cell array in which one or more -0255 % entries is a nested cell array, and flattens it into a 2D matrix cell -0256 % array, where the nested entries are spread across new columns. -0257 % -0258 % CFLAT = FLATTENCELL(C,STRFLAG) if STRFLAG is TRUE, empty entries in the -0259 % resulting CFLAT will be replaced with empty strings {''}. Default = FALSE -0260 if nargin < 2 -0261 strFlag = false; -0262 end -0263 -0264 % determine which entries are cells -0265 cells = cellfun(@iscell,C); -0266 -0267 % determine number of elements in each nested cell -0268 cellsizes = cellfun(@numel,C); -0269 cellsizes(~cells) = 1; % ignore non-cell entries -0270 -0271 % flatten single-entry cells -0272 Cflat = C; -0273 Cflat(cells & (cellsizes == 1)) = cellfun(@(x) x{1},Cflat(cells & (cellsizes == 1)),'UniformOutput',false); -0274 -0275 % iterate through multi-entry cells -0276 multiCells = find(cellsizes > 1); -0277 for i = 1:length(multiCells) -0278 cellContents = Cflat{multiCells(i)}; -0279 Cflat(multiCells(i),1:length(cellContents)) = cellContents; -0280 end -0281 -0282 % change empty elements to strings, if specified -0283 if ( strFlag ) -0284 Cflat(cellfun(@isempty,Cflat)) = {''}; -0285 end -0286 end

    +0249 +0250 function Cflat = flattenCell(C,strFlag) +0251 %FLATTENCELL Flatten a nested column cell array into a matrix cell array. +0252 % +0253 % CFLAT = FLATTENCELL(C) takes a column cell array in which one or more +0254 % entries is a nested cell array, and flattens it into a 2D matrix cell +0255 % array, where the nested entries are spread across new columns. +0256 % +0257 % CFLAT = FLATTENCELL(C,STRFLAG) if STRFLAG is TRUE, empty entries in the +0258 % resulting CFLAT will be replaced with empty strings {''}. Default = FALSE +0259 if nargin < 2 +0260 strFlag = false; +0261 end +0262 +0263 % determine which entries are cells +0264 cells = cellfun(@iscell,C); +0265 +0266 % determine number of elements in each nested cell +0267 cellsizes = cellfun(@numel,C); +0268 cellsizes(~cells) = 1; % ignore non-cell entries +0269 +0270 % flatten single-entry cells +0271 Cflat = C; +0272 Cflat(cells & (cellsizes == 1)) = cellfun(@(x) x{1},Cflat(cells & (cellsizes == 1)),'UniformOutput',false); +0273 +0274 % iterate through multi-entry cells +0275 multiCells = find(cellsizes > 1); +0276 for i = 1:length(multiCells) +0277 cellContents = Cflat{multiCells(i)}; +0278 Cflat(multiCells(i),1:length(cellContents)) = cellContents; +0279 end +0280 +0281 % change empty elements to strings, if specified +0282 if ( strFlag ) +0283 Cflat(cellfun(@isempty,Cflat)) = {''}; +0284 end +0285 end

    Generated by m2html © 2005
    \ No newline at end of file diff --git a/src/geckomat/gather_kcats/getStandardKcat.m b/src/geckomat/gather_kcats/getStandardKcat.m index f5b5061c1..e08eae811 100644 --- a/src/geckomat/gather_kcats/getStandardKcat.m +++ b/src/geckomat/gather_kcats/getStandardKcat.m @@ -150,14 +150,13 @@ % Only add if not geckoLight & getStandardKcat was not run earlier if ~any(strcmp(model.mets,'prot_standard')) - % Add a new gene to be consistent with ec field named standard - proteinStdGenes.genes = 'standard'; - if isfield(model,'geneShortNames') - proteinStdGenes.geneShortNames = 'std'; - end - model = addGenesRaven(model, proteinStdGenes); - if ~model.ec.geckoLight + % Add a new gene to be consistent with ec field named standard + proteinStdGenes.genes = 'standard'; + if isfield(model,'geneShortNames') + proteinStdGenes.geneShortNames = 'std'; + end + model = addGenesRaven(model, proteinStdGenes); % Add a new metabolite named prot_standard proteinStdMets.mets = 'prot_standard'; proteinStdMets.metNames = proteinStdMets.mets; From e15762de4eff122ab19ba9ca0a3accaf8e8247e5 Mon Sep 17 00:00:00 2001 From: edkerk Date: Tue, 27 Jun 2023 01:44:00 +0200 Subject: [PATCH 6/9] fix: light_ecModel until step 29 --- tutorials/light_ecModel/protocol.m | 22 ++++++++++++++-------- 1 file changed, 14 insertions(+), 8 deletions(-) diff --git a/tutorials/light_ecModel/protocol.m b/tutorials/light_ecModel/protocol.m index 2bf69a8c5..27264c42f 100644 --- a/tutorials/light_ecModel/protocol.m +++ b/tutorials/light_ecModel/protocol.m @@ -105,7 +105,7 @@ printFluxes(ecModel,sol.x) saveEcModel(ecModel); -% STEP 16 +% STEP 15-18 % sensitivityTuning also works on light ecModels. However, in this tutorial % an ecModel for the generic Human-GEM model is generated. This model is % not directly suitable for simulations, as it does not represent a @@ -114,10 +114,10 @@ % cells, or otherwise the natural environment]), and what maximum growth % rate should be reached. -% STEP 18-21 +% STEP 19-22 % Proteomics integration is NOT possible with light ecModels. -% STEP 23 +% STEP 25 % Simulating fluxes in light ecModels would follow a similar strategy as % would be suitable for simulating full ecModels without proteomics % integration. E.g. first optimization of a "classical" objective function @@ -125,19 +125,25 @@ % uptake), constraining the ecModel with the objective value that was % reached, followed by a second optimization where the total enzyme usage % is minimized, yielding the most efficient enzyme allocation. +ecModel = loadEcModel(); ecModel = setParam(ecModel,'obj',adapter.params.bioRxn,1); sol = solveLP(ecModel) disp(['Growth rate reached: ' num2str(abs(sol.f))]) % Set growth lower bound to 99% of the previous value ecModel = setParam(ecModel,'lb',adapter.params.bioRxn,0.99*abs(sol.f)); -% Minimize protein pool usage. As protein pool exchange is defined in the -% reverse direction (with negative flux), minimization of protein pool -% usage is computationally represented by maximizing the prot_pool_exchange -% reaction. +% Minimize protein pool usage. ecModel = setParam(ecModel,'obj','prot_pool_exchange',1); sol = solveLP(ecModel) disp(['Minimum protein pool usage: ' num2str(abs(sol.f)) ' mg/gDCW']) +% STEP 26 +% Individual enzyme usages cannot be investigated in light ecModels, as +% these are not explicitly included in the S-matrix. -% TODO: LAST FEW STEPS +% STEP 27-28 +% Mapping fluxes to the conventional GEM works identical as for full +% ecModels. Due to enzymes not being explicitly included in the S-matrix, +% the enzUsageFlux only includes the protein pool exchange. +[mappedFlux, enzUsageFlux, usageEnz] = mapRxnsToConv(ecModel, model, sol.x); +% STEP 29 From 08ad72d5d446a994a2aa66d2972936acc5da45b7 Mon Sep 17 00:00:00 2001 From: edkerk Date: Tue, 27 Jun 2023 15:57:38 +0200 Subject: [PATCH 7/9] feat: getSubsetEcModel + tutorial --- doc/index.html | 33 +- .../geckomat/utilities/getSubsetEcModel.html | 116 + doc/src/geckomat/utilities/index.html | 2 +- src/geckomat/utilities/getSubsetEcModel.m | 55 + tutorials/light_ecModel/code/HT29_ftINIT.m | 46 + tutorials/light_ecModel/data/smilesDB.tsv | 1 + tutorials/light_ecModel/models/HT29-GEM.yml | 110396 +++++++++++++++ tutorials/light_ecModel/models/ecModel.yml | 5 +- tutorials/light_ecModel/protocol.m | 9 +- 9 files changed, 110641 insertions(+), 22 deletions(-) create mode 100644 doc/src/geckomat/utilities/getSubsetEcModel.html create mode 100644 src/geckomat/utilities/getSubsetEcModel.m create mode 100644 tutorials/light_ecModel/code/HT29_ftINIT.m create mode 100644 tutorials/light_ecModel/models/HT29-GEM.yml diff --git a/doc/index.html b/doc/index.html index 92420d4de..31d59f117 100644 --- a/doc/index.html +++ b/doc/index.html @@ -19,22 +19,23 @@

    Matlab Directories

    Matlab Files found in these Directories

    - - - - - - - - - - - - - - - -
    ModelAdapter ecFVA getKcatAcrossIsoenzymes reportEnzymeUsage
    ModelAdapterManager ecFlux_scanning getReactionsFromEnzyme runDLKcat
    abc_max enzymeUsage getStandardKcat run_ecFSEOF
    adapterTemplate fillProtConcs getcarbonnum saveEcModel
    addCarbonNum findECInDB getrSample selectKcatValue
    anaerobicModel findGECKOroot loadBRENDAdata sensitivityTuning
    applyComplexData findMaxValue loadConventionalGEM setKcatForReactions
    applyCustomKcats findMetSmiles loadDatabases setProtPoolSize
    applyKcatConstraints flexibilizeProtConcs loadEcModel sigmaFitter
    bayesianSensitivityTuning fuzzyKcatMatching loadFluxData startGECKOproject
    calculateFfactor getComplexData loadProtData truncateValues
    calculateMW getConcControlCoeffs makeEcModel updateGECKOdoc
    changeMedia getECfromDatabase mapRxnsToConv updateProtPool
    constrainFluxData getECfromGEM mergeDLKcatAndFuzzyKcats updateprior
    constrainProtConcs getECstring plotEcFVA writeDLKcatInput
    copyECtoGEM getFluxTarget readDLKcatOutput
    + ModelAdapter ecFlux_scanning getStandardKcat run_ecFSEOF + ModelAdapterManager enzymeUsage getSubsetEcModel saveEcModel + abc_max fillProtConcs getcarbonnum selectKcatValue + adapterTemplate findECInDB getrSample sensitivityTuning + addCarbonNum findGECKOroot loadBRENDAdata setKcatForReactions + anaerobicModel findMaxValue loadConventionalGEM setProtPoolSize + applyComplexData findMetSmiles loadDatabases sigmaFitter + applyCustomKcats flexibilizeProtConcs loadEcModel startGECKOproject + applyKcatConstraints fuzzyKcatMatching loadFluxData truncateValues + bayesianSensitivityTuning getComplexData loadProtData updateGECKOdoc + calculateFfactor getConcControlCoeffs makeEcModel updateProtPool + calculateMW getECfromDatabase mapRxnsToConv updateprior + changeMedia getECfromGEM mergeDLKcatAndFuzzyKcats writeDLKcatInput + constrainFluxData getECstring plotEcFVA + constrainProtConcs getFluxTarget readDLKcatOutput + copyECtoGEM getKcatAcrossIsoenzymes reportEnzymeUsage + ecFVA getReactionsFromEnzyme runDLKcat
    Generated by m2html © 2005
    diff --git a/doc/src/geckomat/utilities/getSubsetEcModel.html b/doc/src/geckomat/utilities/getSubsetEcModel.html new file mode 100644 index 000000000..86aa614ad --- /dev/null +++ b/doc/src/geckomat/utilities/getSubsetEcModel.html @@ -0,0 +1,116 @@ + + + + Description of getSubsetEcModel + + + + + + + + + +
    Home > src > geckomat > utilities > getSubsetEcModel.m
    + + + +

    getSubsetEcModel +

    + +

    PURPOSE ^

    +
    getSubset_ecModel
    + +

    SYNOPSIS ^

    +
    function smallEcModel = getSubsetEcModel(bigEcModel,smallGEM)
    + +

    DESCRIPTION ^

    +
     getSubset_ecModel
    +   Generate a context-specific ecModel (strain/cell-line/tissue) by
    +   mapping reactions and genes from a conventional context-specific GEM to
    +   a general ecModel (bigEcModel), to yield a context-specific ecModel.
    + 
    + Input:
    +   bigEcModel  enzyme-constrained version of conventional model of
    +                  metabolism for a given species
    +   smallGEM       Reduced model (subset of the general model) for a
    +                  specific strain (microbes) or cell-line/tissues (mammals)
    + 
    + Output:
    +   smallEcModel  Enzyme-constrained version of the context-specific model
    + 
    + Usage: smallEcModel = getSubsetEcModel(smallGEM,bigEcModel)
    + + +

    CROSS-REFERENCE INFORMATION ^

    +This function calls: +
      +
    +This function is called by: +
      +
    + + + + +

    SOURCE CODE ^

    +
    0001 function smallEcModel = getSubsetEcModel(bigEcModel,smallGEM)
    +0002 % getSubset_ecModel
    +0003 %   Generate a context-specific ecModel (strain/cell-line/tissue) by
    +0004 %   mapping reactions and genes from a conventional context-specific GEM to
    +0005 %   a general ecModel (bigEcModel), to yield a context-specific ecModel.
    +0006 %
    +0007 % Input:
    +0008 %   bigEcModel  enzyme-constrained version of conventional model of
    +0009 %                  metabolism for a given species
    +0010 %   smallGEM       Reduced model (subset of the general model) for a
    +0011 %                  specific strain (microbes) or cell-line/tissues (mammals)
    +0012 %
    +0013 % Output:
    +0014 %   smallEcModel  Enzyme-constrained version of the context-specific model
    +0015 %
    +0016 % Usage: smallEcModel = getSubsetEcModel(smallGEM,bigEcModel)
    +0017 
    +0018 % Check if original bigEcModel contains context-dependent protein constraints
    +0019 if any(bigEcModel.lb(startsWith(bigEcModel.rxns,'usage_prot_')) ~= -1000)
    +0020     disp(['The bigEcModel is constraint by protein concentrations that are ' ...
    +0021              'likely not relevant in the constructed smallEcModel.'])
    +0022 end
    +0023 
    +0024 % Remove genes (and associated reactions) that are absent in smallGEM
    +0025 genesToRemove  = setdiff(bigEcModel.genes,smallGEM.genes);
    +0026 smallEcModel = removeGenes(bigEcModel,genesToRemove,true,true,false);
    +0027 
    +0028 % Remove genes from ec-structure
    +0029 enzToRemove = ismember(smallEcModel.ec.genes,genesToRemove);
    +0030 smallEcModel.ec.genes(enzToRemove)       = [];
    +0031 smallEcModel.ec.enzymes(enzToRemove)     = [];
    +0032 smallEcModel.ec.concs(enzToRemove)       = [];
    +0033 smallEcModel.ec.mw(enzToRemove)          = [];
    +0034 smallEcModel.ec.sequence(enzToRemove)    = [];
    +0035 smallEcModel.ec.rxnEnzMat(:,enzToRemove) = [];
    +0036 
    +0037 % Remove any reaction (except prot_ associated) that is absent from smallGEM
    +0038 trimRxns = regexprep(smallEcModel.rxns,'_REV|_EXP_\d+','');
    +0039 protRxns = startsWith(smallEcModel.rxns,{'usage_prot_','prot_pool_exchange'});
    +0040 keepRxns = ismember(trimRxns,smallGEM.rxns) | protRxns;
    +0041 smallEcModel = removeReactions(smallEcModel,~keepRxns, true, true, true);
    +0042 
    +0043 % Remove reactions from ec-structure
    +0044 ecRxnsToRemove = ~ismember(smallEcModel.ec.rxns,smallEcModel.rxns);
    +0045 
    +0046 smallEcModel.ec.rxns(ecRxnsToRemove)        = [];
    +0047 smallEcModel.ec.kcat(ecRxnsToRemove)        = [];
    +0048 smallEcModel.ec.source(ecRxnsToRemove)      = [];
    +0049 smallEcModel.ec.notes(ecRxnsToRemove)       = [];
    +0050 smallEcModel.ec.eccodes(ecRxnsToRemove)     = [];
    +0051 smallEcModel.ec.rxnEnzMat(ecRxnsToRemove,:) = [];
    +0052 
    +0053 smallEcModel = removeReactions(smallEcModel,~keepRxns, true, true, true);
    +0054 end
    +0055
    +
    Generated by m2html © 2005
    + + \ No newline at end of file diff --git a/doc/src/geckomat/utilities/index.html b/doc/src/geckomat/utilities/index.html index de2fe64d4..fe07e76dc 100644 --- a/doc/src/geckomat/utilities/index.html +++ b/doc/src/geckomat/utilities/index.html @@ -19,7 +19,7 @@

    Index for src\geckomat\utilities

    Matlab files in this directory:

    -
     ecFVAecFVA
     enzymeUsageenzymeUsage
     findGECKOrootfindGECKOroot
     getFluxTargetgetFluxTarget
     loadConventionalGEMloadConventionalGEM
     loadEcModelloadEcModel
     loadFluxDataloadFluxData
     loadProtDataloadProtData
     mapRxnsToConvmapRxnsToConv
     plotEcFVAplotEcFVA
     reportEnzymeUsagereportEnzymeUsage
     saveEcModelsaveECmodel
     startGECKOprojectstartGECKOproject
     updateGECKOdocupdateGeckoDoc
    + ecFVAecFVA  enzymeUsageenzymeUsage  findGECKOrootfindGECKOroot  getFluxTargetgetFluxTarget  getSubsetEcModelgetSubset_ecModel  loadConventionalGEMloadConventionalGEM  loadEcModelloadEcModel  loadFluxDataloadFluxData  loadProtDataloadProtData  mapRxnsToConvmapRxnsToConv  plotEcFVAplotEcFVA  reportEnzymeUsagereportEnzymeUsage  saveEcModelsaveECmodel  startGECKOprojectstartGECKOproject  updateGECKOdocupdateGeckoDoc

    Subsequent directories:

    diff --git a/src/geckomat/utilities/getSubsetEcModel.m b/src/geckomat/utilities/getSubsetEcModel.m new file mode 100644 index 000000000..1e167471d --- /dev/null +++ b/src/geckomat/utilities/getSubsetEcModel.m @@ -0,0 +1,55 @@ +function smallEcModel = getSubsetEcModel(bigEcModel,smallGEM) +% getSubset_ecModel +% Generate a context-specific ecModel (strain/cell-line/tissue) by +% mapping reactions and genes from a conventional context-specific GEM to +% a general ecModel (bigEcModel), to yield a context-specific ecModel. +% +% Input: +% bigEcModel enzyme-constrained version of conventional model of +% metabolism for a given species +% smallGEM Reduced model (subset of the general model) for a +% specific strain (microbes) or cell-line/tissues (mammals) +% +% Output: +% smallEcModel Enzyme-constrained version of the context-specific model +% +% Usage: smallEcModel = getSubsetEcModel(smallGEM,bigEcModel) + +% Check if original bigEcModel contains context-dependent protein constraints +if any(bigEcModel.lb(startsWith(bigEcModel.rxns,'usage_prot_')) ~= -1000) + disp(['The bigEcModel is constraint by protein concentrations that are ' ... + 'likely not relevant in the constructed smallEcModel.']) +end + +% Remove genes (and associated reactions) that are absent in smallGEM +genesToRemove = setdiff(bigEcModel.genes,smallGEM.genes); +smallEcModel = removeGenes(bigEcModel,genesToRemove,true,true,false); + +% Remove genes from ec-structure +enzToRemove = ismember(smallEcModel.ec.genes,genesToRemove); +smallEcModel.ec.genes(enzToRemove) = []; +smallEcModel.ec.enzymes(enzToRemove) = []; +smallEcModel.ec.concs(enzToRemove) = []; +smallEcModel.ec.mw(enzToRemove) = []; +smallEcModel.ec.sequence(enzToRemove) = []; +smallEcModel.ec.rxnEnzMat(:,enzToRemove) = []; + +% Remove any reaction (except prot_ associated) that is absent from smallGEM +trimRxns = regexprep(smallEcModel.rxns,'_REV|_EXP_\d+',''); +protRxns = startsWith(smallEcModel.rxns,{'usage_prot_','prot_pool_exchange'}); +keepRxns = ismember(trimRxns,smallGEM.rxns) | protRxns; +smallEcModel = removeReactions(smallEcModel,~keepRxns, true, true, true); + +% Remove reactions from ec-structure +ecRxnsToRemove = ~ismember(smallEcModel.ec.rxns,smallEcModel.rxns); + +smallEcModel.ec.rxns(ecRxnsToRemove) = []; +smallEcModel.ec.kcat(ecRxnsToRemove) = []; +smallEcModel.ec.source(ecRxnsToRemove) = []; +smallEcModel.ec.notes(ecRxnsToRemove) = []; +smallEcModel.ec.eccodes(ecRxnsToRemove) = []; +smallEcModel.ec.rxnEnzMat(ecRxnsToRemove,:) = []; + +smallEcModel = removeReactions(smallEcModel,~keepRxns, true, true, true); +end + \ No newline at end of file diff --git a/tutorials/light_ecModel/code/HT29_ftINIT.m b/tutorials/light_ecModel/code/HT29_ftINIT.m new file mode 100644 index 000000000..22fb0308a --- /dev/null +++ b/tutorials/light_ecModel/code/HT29_ftINIT.m @@ -0,0 +1,46 @@ +% For reference, code is provided here that was used to make a cell-line +% specific (HT-29) model of human-GEM with the ftINIT function of RAVEN. +% This model, stored at tutorials/light_ecModel/models/HT-29-GEM.yml, is +% for demontration purposes only. The intention of the code in this file is +% not to routinely regenerate this model file, but merely as reference how +% the HT-29-GEM was constructed. + +% Have the Human-GEM repo at release 1.15.0, and added to the MATLAB path. +humanGEMroot = HumanGEMInstaller.getHumanGEMMainPath; +load(fullfile(humanGEMroot,'model','Human-GEM.mat'); +m = ihuman; +m.grRules = simplifyGrRules(m.grRules, true); + +prepDataHumanGEM = prepHumanModelForftINIT(m, true, ... + fullfile(humanGEMroot,'data','metabolicTasks','metabolicTasks_Essential.txt'), ... + fullfile(humanGEMroot,'model','reactions.tsv')); +save('prepDataHumanGEMGeneSymbols.mat','prepDataHumanGEM'); + +% Use RNA-seq data of cell line HT-29 (ACH-000552) from DepMap, downloaded +% from here: https://depmap.org/portal/download/all/. + +tbl = readtable('OmicsExpressionProteinCodingGenesTPMLogp1.csv'); +% Cell lines are per row, genes are columns. +sel = strcmp(tbl.Var1, 'ACH-000552'); +genes = tbl.Properties.VariableNames(2:end); +for x = 1:length(genes) + a = split(genes{x}, '_'); + genes{x} = a{1}; +end + +% Invert Logp1 +dataTmp = table2array(tbl(sel,2:end)); +data = 2.^dataTmp - 1; + +arrayData = struct(); +arrayData.genes = genes.'; +arrayData.levels = data.'; +arrayData.tissues = {'1'}; +arrayData.threshold = 1; +HT29 = ftINIT(prepDataHumanGEM,arrayData.tissues{1},[],[],arrayData,{},getHumanGEMINITSteps('1+1'),false,true,[]); + +% Restore ENSEMBL gene identifiers and remove unnecessary fields +[HT29.grRules,HT29.genes,HT29.rxnGeneMat] = translateGrRules(HT29.grRules,'ENSG','Symbol'); +HT29 = rmfield(HT29,{'geneShortNames','rxnReferences','rxnFrom','metFrom','rxnConfidenceScores','rxnNotes','metCharges','inchis','metFormulas','subSystems','eccodes'}); +HT29.name = 'GEM of HT-29 cell-line, for use in GECKO3 tutorial'; +writeYAMLmodel(HT29,fullfile('..','models','HT29-GEM.yml')); diff --git a/tutorials/light_ecModel/data/smilesDB.tsv b/tutorials/light_ecModel/data/smilesDB.tsv index 6c9b2dfbd..b796fed8e 100644 --- a/tutorials/light_ecModel/data/smilesDB.tsv +++ b/tutorials/light_ecModel/data/smilesDB.tsv @@ -3498,3 +3498,4 @@ ximenic acid CCCCCCCCC=CCCCCCCCCCCCCCCCC(=O)O xylitol C(C(C(C(CO)O)O)O)O zinc [Zn] zymosterol CC(CCC=C(C)C)C1CCC2C1(CCC3=C2CCC4C3(CCC(C4)O)C)C + diff --git a/tutorials/light_ecModel/models/HT29-GEM.yml b/tutorials/light_ecModel/models/HT29-GEM.yml new file mode 100644 index 000000000..b638c7e41 --- /dev/null +++ b/tutorials/light_ecModel/models/HT29-GEM.yml @@ -0,0 +1,110396 @@ +--- +!!omap +- metaData: + id: "Human-GEM" + name: "GEM of HT-29 cell-line, for use in GECKO3 tutorial" + version: "1.15.0" + date: "2023-06-27" + defaultLB: "-1000" + defaultUB: "1000" + taxonomy: "9606" + note: "Genome-scale metabolic models are valuable tools to study metabolism and provide a scaffold for the integrative analysis of omics data. This is the latest version of Human-GEM, which is a genome-scale metabolic model of a generic human cell. The objective of Human-GEM is to serve as a community model for enabling integrative and mechanistic studies of human metabolism." + sourceUrl: "https://github.com/SysBioChalmers/Human-GEM" +- metabolites: + - !!omap + - id: "MAM00001e" + - name: "(-)-trans-carveol" + - compartment: "e" + - !!omap + - id: "MAM00002e" + - name: "(+)-alpha-pinene" + - compartment: "e" + - !!omap + - id: "MAM00003c" + - name: "(10Z)-heptadecenoic acid" + - compartment: "c" + - !!omap + - id: "MAM00003l" + - name: "(10Z)-heptadecenoic acid" + - compartment: "l" + - !!omap + - id: "MAM00003r" + - name: "(10Z)-heptadecenoic acid" + - compartment: "r" + - !!omap + - id: "MAM00003e" + - name: "(10Z)-heptadecenoic acid" + - compartment: "e" + - !!omap + - id: "MAM00004c" + - name: "(10Z)-heptadecenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00004m" + - name: "(10Z)-heptadecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00004r" + - name: "(10Z)-heptadecenoyl-CoA" + - compartment: "r" + - !!omap + - id: "MAM00005c" + - name: "(11R)-HPETE" + - compartment: "c" + - !!omap + - id: "MAM00006c" + - name: "(11Z)-docosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00006m" + - name: "(11Z)-docosenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00006r" + - name: "(11Z)-docosenoyl-CoA" + - compartment: "r" + - !!omap + - id: "MAM00007c" + - name: "(11Z)-eicosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00007m" + - name: "(11Z)-eicosenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00007x" + - name: "(11Z)-eicosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00007r" + - name: "(11Z)-eicosenoyl-CoA" + - compartment: "r" + - !!omap + - id: "MAM00008c" + - name: "(11Z,14Z)-eicosadienoic acid" + - compartment: "c" + - !!omap + - id: "MAM00008l" + - name: "(11Z,14Z)-eicosadienoic acid" + - compartment: "l" + - !!omap + - id: "MAM00008r" + - name: "(11Z,14Z)-eicosadienoic acid" + - compartment: "r" + - !!omap + - id: "MAM00008e" + - name: "(11Z,14Z)-eicosadienoic acid" + - compartment: "e" + - !!omap + - id: "MAM00009c" + - name: "(11Z,14Z)-eicosadienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00009m" + - name: "(11Z,14Z)-eicosadienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00009r" + - name: "(11Z,14Z)-eicosadienoyl-CoA" + - compartment: "r" + - !!omap + - id: "MAM00010c" + - name: "(11Z,14Z,17Z)-eicosatrienoic acid" + - compartment: "c" + - !!omap + - id: "MAM00010l" + - name: "(11Z,14Z,17Z)-eicosatrienoic acid" + - compartment: "l" + - !!omap + - id: "MAM00010r" + - name: "(11Z,14Z,17Z)-eicosatrienoic acid" + - compartment: "r" + - !!omap + - id: "MAM00010e" + - name: "(11Z,14Z,17Z)-eicosatrienoic acid" + - compartment: "e" + - !!omap + - id: "MAM00011c" + - name: "(11Z,14Z,17Z)-eicosatrienoylcarnitine" + - compartment: "c" + - !!omap + - id: "MAM00011m" + - name: "(11Z,14Z,17Z)-eicosatrienoylcarnitine" + - compartment: "m" + - !!omap + - id: "MAM00011r" + - name: "(11Z,14Z,17Z)-eicosatrienoylcarnitine" + - compartment: "r" + - !!omap + - id: "MAM00012c" + - name: "(11Z,14Z,17Z)-eicosatrienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00012m" + - name: "(11Z,14Z,17Z)-eicosatrienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00012r" + - name: "(11Z,14Z,17Z)-eicosatrienoyl-CoA" + - compartment: "r" + - !!omap + - id: "MAM00013c" + - name: "(13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate" + - compartment: "c" + - !!omap + - id: "MAM00014x" + - name: "(13E)-tetranor-16-carboxy-LTE4" + - compartment: "x" + - !!omap + - id: "MAM00015x" + - name: "(13E)-tetranor-16-oxo-16-CoA-LTE4" + - compartment: "x" + - !!omap + - id: "MAM00016c" + - name: "(13Z)-docosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00016m" + - name: "(13Z)-docosenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00016x" + - name: "(13Z)-docosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00016r" + - name: "(13Z)-docosenoyl-CoA" + - compartment: "r" + - !!omap + - id: "MAM00017c" + - name: "(13Z)-eicosenoic acid" + - compartment: "c" + - !!omap + - id: "MAM00017l" + - name: "(13Z)-eicosenoic acid" + - compartment: "l" + - !!omap + - id: "MAM00017r" + - name: "(13Z)-eicosenoic acid" + - compartment: "r" + - !!omap + - id: "MAM00017e" + - name: "(13Z)-eicosenoic acid" + - compartment: "e" + - !!omap + - id: "MAM00018c" + - name: "(13Z)-eicosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00018m" + - name: "(13Z)-eicosenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00018x" + - name: "(13Z)-eicosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00018r" + - name: "(13Z)-eicosenoyl-CoA" + - compartment: "r" + - !!omap + - id: "MAM00019c" + - name: "(13Z)-octadecenoic acid" + - compartment: "c" + - !!omap + - id: "MAM00019l" + - name: "(13Z)-octadecenoic acid" + - compartment: "l" + - !!omap + - id: "MAM00019r" + - name: "(13Z)-octadecenoic acid" + - compartment: "r" + - !!omap + - id: "MAM00019e" + - name: "(13Z)-octadecenoic acid" + - compartment: "e" + - !!omap + - id: "MAM00020c" + - name: "(13Z)-octadecenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00020m" + - name: "(13Z)-octadecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00020r" + - name: "(13Z)-octadecenoyl-CoA" + - compartment: "r" + - !!omap + - id: "MAM00021c" + - name: "(13Z,16Z)-docosadienoic acid" + - compartment: "c" + - !!omap + - id: "MAM00021l" + - name: "(13Z,16Z)-docosadienoic acid" + - compartment: "l" + - !!omap + - id: "MAM00021r" + - name: "(13Z,16Z)-docosadienoic acid" + - compartment: "r" + - !!omap + - id: "MAM00021e" + - name: "(13Z,16Z)-docosadienoic acid" + - compartment: "e" + - !!omap + - id: "MAM00022c" + - name: "(13Z,16Z)-docosadienoylcarnitine" + - compartment: "c" + - !!omap + - id: "MAM00022m" + - name: "(13Z,16Z)-docosadienoylcarnitine" + - compartment: "m" + - !!omap + - id: "MAM00022r" + - name: "(13Z,16Z)-docosadienoylcarnitine" + - compartment: "r" + - !!omap + - id: "MAM00023c" + - name: "(13Z,16Z)-docosadienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00023m" + - name: "(13Z,16Z)-docosadienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00023r" + - name: "(13Z,16Z)-docosadienoyl-CoA" + - compartment: "r" + - !!omap + - id: "MAM00024c" + - name: "(15Z)-tetracosenoylcarnitine" + - compartment: "c" + - !!omap + - id: "MAM00024r" + - name: "(15Z)-tetracosenoylcarnitine" + - compartment: "r" + - !!omap + - id: "MAM00025c" + - name: "(15Z)-tetracosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00025x" + - name: "(15Z)-tetracosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00025r" + - name: "(15Z)-tetracosenoyl-CoA" + - compartment: "r" + - !!omap + - id: "MAM00026m" + - name: "(18E)-20-oxo-20-CoA-LTB4" + - compartment: "m" + - !!omap + - id: "MAM00026x" + - name: "(18E)-20-oxo-20-CoA-LTB4" + - compartment: "x" + - !!omap + - id: "MAM00027x" + - name: "(18E)-20-oxo-20-CoA-LTE4" + - compartment: "x" + - !!omap + - id: "MAM00028c" + - name: "(18R)-HEPE" + - compartment: "c" + - !!omap + - id: "MAM00029c" + - name: "(18R)-hydroxy-(5Z,8Z,11Z,14Z,16E)-eicosapentaenoic acid" + - compartment: "c" + - !!omap + - id: "MAM00030c" + - name: "(1aalpha,2beta,3alpha,11calpha)-1a,2,3,11c-tetrahydro-6,11-dimethylbenzo[6,7]phenanthro[3,4-b]oxirene-2,3-diol" + - compartment: "c" + - !!omap + - id: "MAM00031c" + - name: "(1R)-hydroxy-(2R)-glutathionyl-1,2-dihydronaphthalene" + - compartment: "c" + - !!omap + - id: "MAM00032c" + - name: "(1R,2S)-naphthalene 1,2-oxide" + - compartment: "c" + - !!omap + - id: "MAM00032e" + - name: "(1R,2S)-naphthalene 1,2-oxide" + - compartment: "e" + - !!omap + - id: "MAM00033c" + - name: "(1S)-hydroxy-(2S)-glutathionyl-1,2-dihydronaphthalene" + - compartment: "c" + - !!omap + - id: "MAM00034c" + - name: "(1S,2R)-naphthalene 1,2-oxide" + - compartment: "c" + - !!omap + - id: "MAM00035c" + - name: "(24R)-24,25-dihydroxycalciol" + - compartment: "c" + - !!omap + - id: "MAM00035m" + - name: "(24R)-24,25-dihydroxycalciol" + - compartment: "m" + - !!omap + - id: "MAM00035e" + - name: "(24R)-24,25-dihydroxycalciol" + - compartment: "e" + - !!omap + - id: "MAM00036m" + - name: "(24R,25R)3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00036x" + - name: "(24R,25R)3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00037x" + - name: "(24R,25R)3alpha,7alpha,24-trihydroxy-5beta-cholestanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00038c" + - name: "(2E)-decenoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00039m" + - name: "(2E)-decenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00039x" + - name: "(2E)-decenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00040c" + - name: "(2E)-docosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00040m" + - name: "(2E)-docosenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00040x" + - name: "(2E)-docosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00041c" + - name: "(2E)-dodecenoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00042m" + - name: "(2E)-dodecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00042x" + - name: "(2E)-dodecenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00043c" + - name: "(2E)-eicosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00043m" + - name: "(2E)-eicosenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00043x" + - name: "(2E)-eicosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00044c" + - name: "(2E)-heneicosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00044m" + - name: "(2E)-heneicosenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00045c" + - name: "(2E)-heptadecenoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00046m" + - name: "(2E)-heptadecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00047c" + - name: "(2E)-heptenoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00048m" + - name: "(2E)-heptenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00049c" + - name: "(2E)-hexacosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00049x" + - name: "(2E)-hexacosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00050c" + - name: "(2E)-hexadecenoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00051m" + - name: "(2E)-hexadecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00051x" + - name: "(2E)-hexadecenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00052c" + - name: "(2E)-hexenoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00053m" + - name: "(2E)-hexenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00053x" + - name: "(2E)-hexenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00054c" + - name: "(2E)-nonadecenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00054m" + - name: "(2E)-nonadecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00055c" + - name: "(2E)-nonenoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00056m" + - name: "(2E)-nonenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00057c" + - name: "(2E)-octadecenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00057m" + - name: "(2E)-octadecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00057x" + - name: "(2E)-octadecenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00058c" + - name: "(2E)-octenoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00059m" + - name: "(2E)-octenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00059x" + - name: "(2E)-octenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00060c" + - name: "(2E)-pentadecenoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00061m" + - name: "(2E)-pentadecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00062c" + - name: "(2E)-pentenoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00063m" + - name: "(2E)-pentenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00064c" + - name: "(2E)-tetracosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00064x" + - name: "(2E)-tetracosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00065c" + - name: "(2E)-tetradecenoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00066m" + - name: "(2E)-tetradecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00066x" + - name: "(2E)-tetradecenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00067c" + - name: "(2E)-tricosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00068c" + - name: "(2E)-tridecenoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00069m" + - name: "(2E)-tridecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00070c" + - name: "(2E)-undecenoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00071m" + - name: "(2E)-undecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00072m" + - name: "(2E,4Z,7Z,10Z)-hexadecatetraenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00073m" + - name: "(2E,6Z,9Z,12Z)-octadecatetraenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00074c" + - name: "(2E,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00075x" + - name: "(2R)-pristanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00076x" + - name: "(2R,6R,10R)-trimethyl-hendecanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00078x" + - name: "(2S)-pristanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00079x" + - name: "(2S,6R,10R)-trimethyl-(2E)-hendecenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00080x" + - name: "(2S,6R,10R)-trimethyl-hendecanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00081m" + - name: "(3S)-3-hydroxy-cis,cis-palmito-7,10-dienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00081x" + - name: "(3S)-3-hydroxy-cis,cis-palmito-7,10-dienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00082m" + - name: "(3S)-3-hydroxydodec-cis-6-enoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00082x" + - name: "(3S)-3-hydroxydodec-cis-6-enoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00083m" + - name: "(3S)-3-hydroxylinoleoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00083x" + - name: "(3S)-3-hydroxylinoleoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00085c" + - name: "(3S)-hydroxy-docasa-cis,cis-13,16-dienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00086c" + - name: "(3S)-hydroxy-eicosa-cis,cis,cis-11,14,17-trienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00087c" + - name: "(3S)-hydroxy-eicosa-cis,cis-11,14-dienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00088m" + - name: "(3Z)-dodecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00088x" + - name: "(3Z)-dodecenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00089m" + - name: "(3Z,7Z,10Z)-hexadecatrienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00090x" + - name: "(4R,8R,12R)-trimethyl-(2E)-tridecenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00091m" + - name: "(4Z,7Z,10Z)-hexadecatrienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00092c" + - name: "(4Z,7Z,10Z,13Z,16Z)-docosapentaenoylcarnitine" + - compartment: "c" + - !!omap + - id: "MAM00092m" + - name: "(4Z,7Z,10Z,13Z,16Z)-docosapentaenoylcarnitine" + - compartment: "m" + - !!omap + - id: "MAM00092r" + - name: "(4Z,7Z,10Z,13Z,16Z)-docosapentaenoylcarnitine" + - compartment: "r" + - !!omap + - id: "MAM00093c" + - name: "(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00093m" + - name: "(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00093x" + - name: "(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00093r" + - name: "(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA" + - compartment: "r" + - !!omap + - id: "MAM00094c" + - name: "(4Z,7Z,10Z,13Z,16Z)-DPA" + - compartment: "c" + - !!omap + - id: "MAM00094l" + - name: "(4Z,7Z,10Z,13Z,16Z)-DPA" + - compartment: "l" + - !!omap + 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"MAM00099m" + - name: "(5Z)-dodecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00099x" + - name: "(5Z)-dodecenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00100c" + - name: "(5Z,8Z,11Z)-eicosatrienoylcarnitine" + - compartment: "c" + - !!omap + - id: "MAM00100m" + - name: "(5Z,8Z,11Z)-eicosatrienoylcarnitine" + - compartment: "m" + - !!omap + - id: "MAM00100r" + - name: "(5Z,8Z,11Z)-eicosatrienoylcarnitine" + - compartment: "r" + - !!omap + - id: "MAM00101c" + - name: "(5Z,8Z,11Z)-eicosatrienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00101m" + - name: "(5Z,8Z,11Z)-eicosatrienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00101r" + - name: "(5Z,8Z,11Z)-eicosatrienoyl-CoA" + - compartment: "r" + - !!omap + - id: "MAM00102c" + - name: "(5Z,8Z,11Z,14Z,17Z)-eicosapentaenoylcarnitine" + - compartment: "c" + - !!omap + - id: "MAM00102m" + - name: "(5Z,8Z,11Z,14Z,17Z)-eicosapentaenoylcarnitine" + - compartment: "m" + - !!omap + - id: "MAM00102r" + - name: 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"20-oxo-LTB4" + - compartment: "c" + - !!omap + - id: "MAM00600m" + - name: "20-oxo-LTB4" + - compartment: "m" + - !!omap + - id: "MAM00600r" + - name: "20-oxo-LTB4" + - compartment: "r" + - !!omap + - id: "MAM00601x" + - name: "20-oxo-LTE4" + - compartment: "x" + - !!omap + - id: "MAM00602c" + - name: "20-trihydroxy-LTB4" + - compartment: "c" + - !!omap + - id: "MAM00604c" + - name: "21-hydroxyallopregnanolone" + - compartment: "c" + - !!omap + - id: "MAM00607c" + - name: "23S,25,26-trihydroxyvitamin D3" + - compartment: "c" + - !!omap + - id: "MAM00607m" + - name: "23S,25,26-trihydroxyvitamin D3" + - compartment: "m" + - !!omap + - id: "MAM00608c" + - name: "23s,25-dihydroxyvitamin D3" + - compartment: "c" + - !!omap + - id: "MAM00608m" + - name: "23s,25-dihydroxyvitamin D3" + - compartment: "m" + - !!omap + - id: "MAM00609c" + - name: "24,25-dihydrolanosterol" + - compartment: "c" + - !!omap + - id: "MAM00610c" + - name: "24-hydroxycholesterol" + - compartment: "c" + - !!omap + - id: "MAM00611c" + - name: "24-oxo-1alpha,23,25-trihydroxyvitamin D3" + - compartment: "c" + - !!omap + - id: "MAM00611m" + - name: "24-oxo-1alpha,23,25-trihydroxyvitamin D3" + - compartment: "m" + - !!omap + - id: "MAM00612c" + - name: "24-oxo-1alpha,25-dihydroxyvitamin D3" + - compartment: "c" + - !!omap + - id: "MAM00612m" + - name: "24-oxo-1alpha,25-dihydroxyvitamin D3" + - compartment: "m" + - !!omap + - id: "MAM00613c" + - name: "24R,25-dihyoxyvitamin D2" + - compartment: "c" + - !!omap + - id: "MAM00613m" + - name: "24R,25-dihyoxyvitamin D2" + - compartment: "m" + - !!omap + - id: "MAM00613e" + - name: "24R,25-dihyoxyvitamin D2" + - compartment: "e" + - !!omap + - id: "MAM00614c" + - name: "25(R)DHCA-CoA" + - compartment: "c" + - !!omap + - id: "MAM00614x" + - name: "25(R)DHCA-CoA" + - compartment: "x" + - !!omap + - id: "MAM00614r" + - name: "25(R)DHCA-CoA" + - compartment: "r" + - !!omap + - id: "MAM00616c" + - name: "25(R)THCA-CoA" + - compartment: "c" + - !!omap + - id: "MAM00616m" + - name: "25(R)THCA-CoA" + - compartment: "m" + - !!omap + - id: "MAM00616x" + - name: "25(R)THCA-CoA" + - compartment: "x" + - !!omap + - id: "MAM00616r" + - name: "25(R)THCA-CoA" + - compartment: "r" + - !!omap + - id: "MAM00617x" + - name: "25(S)DHCA-CoA" + - compartment: "x" + - !!omap + - id: "MAM00618m" + - name: "25(S)THCA-CoA" + - compartment: "m" + - !!omap + - id: "MAM00618x" + - name: "25(S)THCA-CoA" + - compartment: "x" + - !!omap + - id: "MAM00619r" + - name: "25-hydroxycholesterol" + - compartment: "r" + - !!omap + - id: "MAM00620c" + - name: "25-hydroxyvitamin D2" + - compartment: "c" + - !!omap + - id: "MAM00620m" + - name: "25-hydroxyvitamin D2" + - compartment: "m" + - !!omap + - id: "MAM00620e" + - name: "25-hydroxyvitamin D2" + - compartment: "e" + - !!omap + - id: "MAM00621c" + - name: "25-hydroxyvitamin D3-26,23-lactol" + - compartment: "c" + - !!omap + - id: "MAM00621m" + - name: "25-hydroxyvitamin D3-26,23-lactol" + - compartment: "m" + - !!omap + - id: "MAM00622c" + - name: "25-hydroxyvitamin D3-26,23-lactone" + - compartment: "c" + - !!omap + - id: "MAM00622m" + - name: "25-hydroxyvitamin D3-26,23-lactone" + - compartment: "m" + - !!omap + - id: "MAM00624c" + - name: "27alpha-hydroxy-7-dehydrocholesterol" + - compartment: "c" + - !!omap + - id: "MAM00626c" + - name: "2-acetyl-1-alkyl-sn-glycero-3-phosphocholine" + - compartment: "c" + - !!omap + - id: "MAM00626e" + - name: "2-acetyl-1-alkyl-sn-glycero-3-phosphocholine" + - compartment: "e" + - !!omap + - id: "MAM00628c" + - name: "2-acyl-1-alkyl-sn-glycero-3-phosphate" + - compartment: "c" + - !!omap + - id: "MAM00629c" + - name: "2-amino-3-carboxymuconate semialdehyde" + - compartment: "c" + - !!omap + - id: "MAM00630m" + - name: "2-amino-3-oxoadipate" + - compartment: "m" + - !!omap + - id: "MAM00631c" + - name: "2-aminoadipate 6-semialdehyde" + - compartment: "c" + - !!omap + - id: "MAM00631m" + - name: "2-aminoadipate 6-semialdehyde" + - compartment: "m" + - !!omap + - id: "MAM00635c" + - name: "2-arachidonoylglycerol" + - compartment: "c" + - !!omap + - id: "MAM00636c" + - name: "2-bromoacetaldehyde" + - compartment: "c" + - !!omap + - id: "MAM00637c" + - name: "2-bromophenol" + - compartment: "c" + - !!omap + - id: "MAM00638c" + - name: "2-carboxy-2,3-dihydro-5,6-dihydroxyindole" + - compartment: "c" + - !!omap + - id: "MAM00639c" + - name: "2-deoxy-D-ribose-1-phosphate" + - compartment: "c" + - !!omap + - id: "MAM00640c" + - name: "2-deoxy-D-ribose-5-phosphate" + - compartment: "c" + - !!omap + - id: "MAM00641c" + - name: "2-hydroxy-17beta-estradiol-1-S-glutathione" + - compartment: "c" + - !!omap + - id: "MAM00641m" + - name: "2-hydroxy-17beta-estradiol-1-S-glutathione" + - compartment: "m" + - !!omap + - id: "MAM00641x" + - name: "2-hydroxy-17beta-estradiol-1-S-glutathione" + - compartment: "x" + - !!omap + - id: "MAM00641r" + - name: "2-hydroxy-17beta-estradiol-1-S-glutathione" + - compartment: "r" + - !!omap + - id: "MAM00642c" + - name: "2-hydroxy-17beta-estradiol-4-S-glutathione" + - compartment: "c" + - !!omap + - id: "MAM00642m" + - name: "2-hydroxy-17beta-estradiol-4-S-glutathione" + - compartment: "m" + - !!omap + - id: "MAM00642x" + - name: "2-hydroxy-17beta-estradiol-4-S-glutathione" + - compartment: "x" + - !!omap + - id: "MAM00642r" + - name: "2-hydroxy-17beta-estradiol-4-S-glutathione" + - compartment: "r" + - !!omap + - id: "MAM00644c" + - name: "2-hydroxy-3-methoxy-17beta-estradiol" + - compartment: "c" + - !!omap + - id: "MAM00645c" + - name: "2-hydroxy-3-methoxyestrone" + - compartment: "c" + - !!omap + - id: "MAM00648c" + - name: "2-hydroxybutyrate" + - compartment: "c" + - !!omap + - id: "MAM00648e" + - name: "2-hydroxybutyrate" + - compartment: "e" + - !!omap + - id: "MAM00649c" + - name: "2-hydroxyestradiol-17beta" + - compartment: "c" + - !!omap + - id: "MAM00649l" + - name: "2-hydroxyestradiol-17beta" + - compartment: "l" + - !!omap + - id: "MAM00649r" + - name: "2-hydroxyestradiol-17beta" + - compartment: "r" + - !!omap + - id: "MAM00650c" + - name: "2-hydroxyestrone" + - compartment: "c" + - !!omap + - id: "MAM00650r" + - name: "2-hydroxyestrone" + - compartment: "r" + - !!omap + - id: "MAM00651c" + - name: "2-hydroxyestrone-1-S-glutathione" + - compartment: "c" + - !!omap + - id: "MAM00651m" + - name: "2-hydroxyestrone-1-S-glutathione" + - compartment: "m" + - !!omap + - id: "MAM00651x" + - name: "2-hydroxyestrone-1-S-glutathione" + - compartment: "x" + - !!omap + - id: "MAM00651r" + - name: "2-hydroxyestrone-1-S-glutathione" + - compartment: "r" + - !!omap + - id: "MAM00652c" + - name: "2-hydroxyestrone-4-S-glutathione" + - compartment: "c" + - !!omap + - id: "MAM00652m" + - name: "2-hydroxyestrone-4-S-glutathione" + - compartment: "m" + - !!omap + - id: "MAM00652x" + - name: "2-hydroxyestrone-4-S-glutathione" + - compartment: "x" + - !!omap + - id: "MAM00652r" + - name: "2-hydroxyestrone-4-S-glutathione" + - compartment: "r" + - !!omap + - id: "MAM00654c" + - name: "2-hydroxyphenylacetate" + - compartment: "c" + - !!omap + - id: "MAM00655x" + - name: "2-hydroxyphytanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00656c" + - name: "2-lysolecithin pool" + - compartment: "c" + - !!omap + - id: "MAM00656l" + - name: "2-lysolecithin pool" + - compartment: "l" + - !!omap + - id: "MAM00656r" + - name: "2-lysolecithin pool" + - compartment: "r" + - !!omap + - id: "MAM00657m" + - name: "2-methoxy-6-(all-trans-decaprenyl)phenol" + - compartment: "m" + - !!omap + - id: "MAM00658m" + - name: "2-methoxy-6-all trans-decaprenyl-2-methoxy-1,4-benzoquinol" + - compartment: "m" + - !!omap + - id: "MAM00659c" + - name: "2-methoxyestradiol-17beta" + - compartment: "c" + - !!omap + - id: "MAM00660c" + - name: "2-methoxyestrone" + - compartment: "c" + - !!omap + - id: "MAM00660r" + - name: "2-methoxyestrone" + - compartment: "r" + - !!omap + - id: "MAM00661c" + - name: "2-methyl-3-oxopropanoate" + - compartment: "c" + - !!omap + - id: "MAM00661m" + - name: "2-methyl-3-oxopropanoate" + - compartment: "m" + - !!omap + - id: "MAM00662m" + - name: "2-methylacetoacetyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00663m" + - name: "2-methylbutyryl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00665e" + - name: "2-methylcitrate" + - compartment: "e" + - !!omap + - id: "MAM00668c" + - name: "2-naphthol" + - compartment: "c" + - !!omap + - id: "MAM00669c" + - name: "2-oxo-3-methylvalerate" + - compartment: "c" + - !!omap + - id: "MAM00669m" + - name: "2-oxo-3-methylvalerate" + - compartment: "m" + - !!omap + - id: "MAM00670c" + - name: "2-oxoadipate" + - compartment: "c" + - !!omap + - id: "MAM00670m" + - name: "2-oxoadipate" + - compartment: "m" + - !!omap + - id: "MAM00671c" + - name: "2-oxobutyrate" + - compartment: "c" + - !!omap + - id: "MAM00671m" + - name: "2-oxobutyrate" + - compartment: "m" + - !!omap + - id: "MAM00672c" + - name: "2-oxoglutaramate" + - compartment: "c" + - !!omap + - id: "MAM00672m" + - name: "2-oxoglutaramate" + - compartment: "m" + - !!omap + - id: "MAM00673c" + - name: "2-phenylacetamide" + - compartment: "c" + - !!omap + - id: "MAM00674c" + - name: "2-phospho-D-glycerate" + - compartment: "c" + - !!omap + - id: "MAM00678m" + - name: "2-trans-4-cis-decadienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00678x" + - name: "2-trans-4-cis-decadienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00679c" + - name: "2-trans-7,10,13,16,19-all-cis-docosahexaenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00680c" + - name: "2-trans-9,12,15,18,21-all-cis-tetracosahexaenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00681c" + - name: "2-trans-9,12,15,18-all-cis-tetracosapentaenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00685x" + - name: "3(R)-hydroxy-(2S,6R,10)-trimethyl-hendecanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00686x" + - name: "3(R)-hydroxy-(4R,8R,12R)-trimethyl-tridecanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00687m" + - name: "3(S),10(R)-OH-octadeca-6-trans-4,12-cis-trienoate" + - compartment: "m" + - !!omap + - id: "MAM00687x" + - name: "3(S),10(R)-OH-octadeca-6-trans-4,12-cis-trienoate" + - compartment: "x" + - !!omap + - id: "MAM00688m" + - name: "3(S),10(R)-OH-octadeca-6-trans-4,12-cis-trienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00688x" + - name: "3(S),10(R)-OH-octadeca-6-trans-4,12-cis-trienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00689m" + - name: "3(S),12(R)-dihydroxy-5-oxo-eicosa-(8E,10E,14Z)-trienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00689x" + - name: "3(S),12(R)-dihydroxy-5-oxo-eicosa-(8E,10E,14Z)-trienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00690m" + - name: "3(S),12(S)-dihydroxy-5-oxo-eicosa-(8E,10E,14Z)-trienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00690x" + - name: "3(S),12(S)-dihydroxy-5-oxo-eicosa-(8E,10E,14Z)-trienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00691m" + - name: "3(S),5(S),12(R)-trihydroxy-eicosa-8-trans-6,14-cis-trienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00691x" + - name: "3(S),5(S),12(R)-trihydroxy-eicosa-8-trans-6,14-cis-trienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00692m" + - name: "3(S),6(R)-dihydroxy-tetradec-(8Z)-enoate" + - compartment: "m" + - !!omap + - id: "MAM00693m" + - name: "3(S),6(S)-dihydroxy-tetradec-(8Z)-enoate" + - compartment: "m" + - !!omap + - id: "MAM00694m" + - name: "3(S),8(R)-dihydroxy-(6E,10Z)-hexadecadienoate" + - compartment: "m" + - !!omap + - id: "MAM00695m" + - name: "3(S),8(S)-dihydroxy-(6E,10Z)-hexadecadienoate" + - compartment: "m" + - !!omap + - id: "MAM00696m" + - name: "3(S)-hydroxy-(5Z,8Z)-tetradecadienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00696x" + - name: "3(S)-hydroxy-(5Z,8Z)-tetradecadienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00697m" + - name: "3(S)-hydroxy-(6Z,9Z,12Z)-octadecatrienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00698c" + - name: "3(S)-hydroxy-10,13,16-all-cis-docosatrienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00699c" + - name: "3(S)-hydroxy-11-cis-docosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00700c" + - name: "3(S)-hydroxy-11-cis-eicosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00700m" + - name: "3(S)-hydroxy-11-cis-eicosenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00700x" + - name: "3(S)-hydroxy-11-cis-eicosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00701c" + - name: "3(S)-hydroxy-13-cis-docosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00701m" + - name: "3(S)-hydroxy-13-cis-docosenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00701x" + - name: "3(S)-hydroxy-13-cis-docosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00702c" + - name: "3(S)-hydroxy-13-cis-eicosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00702m" + - name: "3(S)-hydroxy-13-cis-eicosenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00702x" + - name: "3(S)-hydroxy-13-cis-eicosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00703m" + - name: "3(S)-hydroxy-2(S),6-dimethyl-heptanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00704c" + - name: "3(S)-hydroxy-3-oxo-eicosadienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00705m" + - name: "3(S)-hydroxy-4(R),8-dimethyl-nonanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00706m" + - name: "3(S)-hydroxy-4-methyl-pentanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00707c" + - name: "3(S)-hydroxy-9-cis-eicosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00708c" + - name: "3(S)-hydroxy-all-cis-8,11,14,17-eicosatetraenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00709c" + - name: "3(S)-hydroxy-cis-15-tetracosaenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00709x" + - name: "3(S)-hydroxy-cis-15-tetracosaenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00710c" + - name: "3(S)-hydroxy-dihomo-gamma-linolenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00711c" + - name: "3(S)-hydroxy-docosa-10,13,16,19-all-cis-tetraenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00712c" + - name: "3(S)-hydroxy-docosa-13,16,19-all-cis-trienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00713c" + - name: "3(S)-hydroxy-docosa-7,10,13,16,19-all-cis-pentaenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00714c" + - name: "3(S)-hydroxy-docosa-7,10,13,16-all-cis-tetraenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00715c" + - name: "3(S)-hydroxy-hexacosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00715x" + - name: "3(S)-hydroxy-hexacosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00716c" + - name: "3(S)-hydroxy-tetracosa-12,15,18,21-all-cis-tetraenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00717x" + - name: "3(S)-hydroxy-tetracosa-6,9,12,15,18-all-cis-pentaenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00718c" + - name: "3(S)-hydroxy-tetracosa-9,12,15,18,21-all-cis-pentaenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00720c" + - name: "3,3-diiodo-L-thyronine" + - compartment: "c" + - !!omap + - id: "MAM00721c" + - name: "3,3-diiodo-L-thyronine-4-O-sulfate" + - compartment: "c" + - !!omap + - id: "MAM00724c" + - name: "3,4-dihydro-3-hydroxy-4-S-glutathionyl bromobenzene" + - compartment: "c" + - !!omap + - id: "MAM00725m" + - name: "3,4-dihydroxy-5-all-trans-decaprenylbenzoate" + - compartment: "m" + - !!omap + - id: "MAM00726c" + - name: "3,4-dihydroxymandelaldehyde" + - compartment: "c" + - !!omap + - id: "MAM00727c" + - name: "3,4-dihydroxymandelate" + - compartment: "c" + - !!omap + - id: "MAM00728c" + - name: "3,4-dihydroxyphenylacetaldehyde" + - compartment: "c" + - !!omap + - id: "MAM00729c" + - name: "3,4-dihydroxyphenylacetate" + - compartment: "c" + - !!omap + - id: "MAM00730c" + - name: "3,4-dihydroxyphenylethyleneglycol" + - compartment: "c" + - !!omap + - id: "MAM00730e" + - name: "3,4-dihydroxyphenylethyleneglycol" + - compartment: "e" + - !!omap + - id: "MAM00731c" + - name: "3,4-epoxynonanal" + - compartment: "c" + - !!omap + - id: "MAM00734c" + - name: "3,5,3-triiodothyronine-4-sulfate" + - compartment: "c" + - !!omap + - id: "MAM00734e" + - name: "3,5,3-triiodothyronine-4-sulfate" + - compartment: "e" + - !!omap + - id: "MAM00736r" + - name: "3,5-diiodo-L-thyronine" + - compartment: "r" + - !!omap + - id: "MAM00739c" + - name: "3,5-diiodo-L-tyrosine" + - compartment: "c" + - !!omap + - id: "MAM00740m" + - name: "3,5-dioxo-12(R)-hydroxy-eicosa-(8E,10E,14Z)-trienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00740x" + - name: "3,5-dioxo-12(R)-hydroxy-eicosa-(8E,10E,14Z)-trienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00741m" + - name: "3,5-dioxo-12(S)-hydroxy-eicosa-(8E,10E,14Z)-trienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00741x" + - name: "3,5-dioxo-12(S)-hydroxy-eicosa-(8E,10E,14Z)-trienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00742c" + - name: "3,7,24THCA" + - compartment: "c" + - !!omap + - id: "MAM00742m" + - name: "3,7,24THCA" + - compartment: "m" + - !!omap + - id: "MAM00743c" + - name: "3,7,24THCA-CoA" + - compartment: "c" + - !!omap + - id: "MAM00743x" + - name: "3,7,24THCA-CoA" + - compartment: "x" + - !!omap + - id: "MAM00744e" + - name: "3,8-LD1" + - compartment: "e" + - !!omap + - id: "MAM00745c" + - name: "3alpha,12alpha-dihydroxy-5beta-cholanate" + - compartment: "c" + - !!omap + - id: "MAM00745r" + - name: "3alpha,12alpha-dihydroxy-5beta-cholanate" + - compartment: "r" + - !!omap + - id: "MAM00747r" + - name: "3alpha,7alpha,12alpha,25-tetrahydroxy-5beta-cholestane-24-one" + - compartment: "r" + - !!omap + - id: "MAM00748m" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-24-oxocholestanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00748x" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-24-oxocholestanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00749m" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00749x" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00751m" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-27-al" + - compartment: "m" + - !!omap + - id: "MAM00752c" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanate" + - compartment: "c" + - !!omap + - id: "MAM00752m" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanate" + - compartment: "m" + - !!omap + - id: "MAM00752x" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanate" + - compartment: "x" + - !!omap + - id: "MAM00752r" + - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanate" + - compartment: "r" + - !!omap + - id: "MAM00753m" + - name: "3alpha,7alpha,24(S)-trihydroxy-5beta-cholestan-27-al" + - compartment: "m" + - !!omap + - id: "MAM00754x" + - name: "3alpha,7alpha-dihydroxy-24-oxo-5beta-cholestanoyl 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compartment: "g" + - !!omap + - id: "MAM00765m" + - name: "3-carboxy-1-hydroxypropyl-ThPP" + - compartment: "m" + - !!omap + - id: "MAM00766c" + - name: "3-carboxy-alpha-chromanol" + - compartment: "c" + - !!omap + - id: "MAM00766m" + - name: "3-carboxy-alpha-chromanol" + - compartment: "m" + - !!omap + - id: "MAM00767m" + - name: "3-decaprenyl-4-hydroxybenzoate" + - compartment: "m" + - !!omap + - id: "MAM00768c" + - name: "3-dehydro-L-gulonate" + - compartment: "c" + - !!omap + - id: "MAM00769c" + - name: "3-dehydrosphinganine" + - compartment: "c" + - !!omap + - id: "MAM00770m" + - name: "3-demethylubiquinol-10" + - compartment: "m" + - !!omap + - id: "MAM00771c" + - name: "3-deoxy-D-glycero-D-galacto-2-nonulosonic acid" + - compartment: "c" + - !!omap + - id: "MAM00771e" + - name: "3-deoxy-D-glycero-D-galacto-2-nonulosonic acid" + - compartment: "e" + - !!omap + - id: "MAM00772c" + - name: "3-deoxy-D-glycero-D-galacto-2-nonulosonic acid-9-phosphate" + - compartment: "c" + - !!omap + - id: "MAM00775c" + - name: "3-hydroxyanthranilate" + - compartment: "c" + - !!omap + - id: "MAM00776c" + - name: "3-hydroxydocosanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00776m" + - name: "3-hydroxydocosanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00776x" + - name: "3-hydroxydocosanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00777c" + - name: "3-hydroxyeicosanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00777m" + - name: "3-hydroxyeicosanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00777x" + - name: "3-hydroxyeicosanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00778c" + - name: "3-hydroxyheneicosanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00778m" + - name: "3-hydroxyheneicosanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00779c" + - name: "3-hydroxyheptadecanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00780m" + - name: "3-hydroxyheptadecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00781c" + - name: "3-hydroxyheptanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00782m" + - name: "3-hydroxyheptanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00783c" + - name: "3-hydroxyhexacosanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00783x" + - name: "3-hydroxyhexacosanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00784m" + - name: "3-hydroxyisobutyrate" + - compartment: "m" + - !!omap + - id: "MAM00785m" + - name: "3-hydroxyisobutyryl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00786c" + - name: "3-hydroxykynurenamine" + - compartment: "c" + - !!omap + - id: "MAM00787c" + - name: "3-hydroxykynurenine-O-beta-D-glucoside" + - compartment: "c" + - !!omap + - id: "MAM00788c" + - name: "3-hydroxy-L-kynurenine" + - compartment: "c" + - !!omap + - id: "MAM00789c" + - name: "3-hydroxy-N6,N6,N6-trimethyl-L-lysine" + - compartment: "c" + - !!omap + - id: "MAM00790c" + - name: "3-hydroxynonadecanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00790m" + - name: "3-hydroxynonadecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00791c" + - name: "3-hydroxynonanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00792m" + - name: "3-hydroxynonanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00793c" + - name: "3-hydroxyoctadecanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00793m" + - name: "3-hydroxyoctadecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00793x" + - name: "3-hydroxyoctadecanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00794c" + - name: "3-hydroxypentadecanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00795m" + - name: "3-hydroxypentadecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00796c" + - name: "3-hydroxypentanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00797m" + - name: "3-hydroxypentanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00798x" + - name: "3-hydroxypristanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00799m" + - name: "3-hydroxypropionyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00800c" + - name: "3-hydroxytetracosanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00800x" + - name: "3-hydroxytetracosanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00801x" + - name: "3-hydroxy-THA-CoA" + - compartment: "x" + - !!omap + - id: "MAM00802c" + - name: "3-hydroxytricosanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00803c" + - name: "3-hydroxytridecanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00804m" + - name: "3-hydroxytridecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00805c" + - name: "3-hydroxyundecanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00806m" + - name: "3-hydroxyundecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00807c" + - name: "3-iodo-L-tyrosine" + - compartment: "c" + - !!omap + - id: "MAM00809c" + - name: "3-keto-4-methylzymosterol" + - compartment: "c" + - !!omap + - id: "MAM00810e" + - name: "3-keto-beta-D-galactose" + - compartment: "e" + - !!omap + - id: "MAM00811c" + - name: "3-keto-eicosa-8,11,14,17-all-cis-tetraenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00812e" + - name: "3-ketolactose" + - compartment: "e" + - !!omap + - id: "MAM00813x" + - name: "3-ketopristanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00814x" + - name: "3-keto-THA-CoA" + - compartment: "x" + - !!omap + - id: "MAM00815c" + - name: "3-mercaptolactate" + - compartment: "c" + - !!omap + - id: "MAM00816c" + - name: "3-mercaptolactate-cysteine-disulfide" + - compartment: "c" + - !!omap + - id: "MAM00816e" + - name: "3-mercaptolactate-cysteine-disulfide" + - compartment: "e" + - !!omap + - id: "MAM00817m" + - name: "3-methoxy-4-hydroxy-5-all-trans-decaprenylbenzoate" + - compartment: "m" + - !!omap + - id: "MAM00818c" + - name: "3-methoxy-4-hydroxyphenylacetaldehyde" + - compartment: "c" + - !!omap + - id: "MAM00820c" + - name: "3-methoxy-4-hydroxyphenylglycolaldehyde" + - compartment: "c" + - !!omap + - id: "MAM00821c" + - name: "3-methoxytyramine" + - compartment: "c" + - !!omap + - id: "MAM00824c" + - name: "3-methyl-2-oxobutyrate" + - compartment: "c" + - !!omap + - id: "MAM00824m" + - name: "3-methyl-2-oxobutyrate" + - compartment: "m" + - !!omap + - id: "MAM00826m" + - name: "3-methylcrotonyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00827m" + - name: "3-methylglutaconyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00828r" + - name: "3-monoiodo-L-thyronine" + - compartment: "r" + - !!omap + - id: "MAM00830c" + - name: "3-O-methyldopa" + - compartment: "c" + - !!omap + - id: "MAM00831m" + - name: "3-oxo-(2S)-methylisocapryloyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00832x" + - name: "3-oxo-(2S,6R,10R)-trimethyl-hendecanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00833x" + - name: "3-oxo-(4R,8R,12R)-trimethyl-tridecanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00834m" + - name: "3-oxo-(6Z,9Z,12Z)-octadecatrienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00835c" + - name: "3-oxo-10(R)-hydroxy-octadeca-(6E,8E,12Z)-trienoate" + - compartment: "c" + - !!omap + - id: "MAM00835m" + - name: "3-oxo-10(R)-hydroxy-octadeca-(6E,8E,12Z)-trienoate" + - compartment: "m" + - !!omap + - id: "MAM00835x" + - name: "3-oxo-10(R)-hydroxy-octadeca-(6E,8E,12Z)-trienoate" + - compartment: "x" + - !!omap + - id: "MAM00836m" + - name: "3-oxo-10(R)-hydroxy-octadeca-(6E,8E,12Z)-trienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00836x" + - name: "3-oxo-10(R)-hydroxy-octadeca-(6E,8E,12Z)-trienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00837c" + - name: "3-oxo-10(S)-hydroxy-octadeca-(6E,8E,12Z)-trienoate" + - compartment: "c" + - !!omap + - id: "MAM00837m" + - name: "3-oxo-10(S)-hydroxy-octadeca-(6E,8E,12Z)-trienoate" + - compartment: "m" + - !!omap + - id: "MAM00837x" + - name: "3-oxo-10(S)-hydroxy-octadeca-(6E,8E,12Z)-trienoate" + - compartment: "x" + - !!omap + - id: "MAM00838m" + - name: "3-oxo-10(S)-hydroxy-octadeca-(6E,8E,12Z)-trienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00838x" + - name: "3-oxo-10(S)-hydroxy-octadeca-(6E,8E,12Z)-trienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00839c" + - name: "3-oxo-11cis-docosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00840c" + - name: "3-oxo-11-cis-eicosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00840m" + - name: "3-oxo-11-cis-eicosenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00840x" + - name: "3-oxo-11-cis-eicosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00841m" + - name: "3-oxo-11-cis-octadecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00841x" + - name: "3-oxo-11-cis-octadecenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00842c" + - name: "3-oxo-13cis-docosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00842m" + - name: "3-oxo-13cis-docosenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00842x" + - name: "3-oxo-13cis-docosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00843c" + - name: "3-oxo-13-cis-eicosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00843m" + - name: "3-oxo-13-cis-eicosenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00843x" + - name: "3-oxo-13-cis-eicosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00844m" + - name: "3-oxo-4(R),8-dimethyl-nonanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00845m" + - name: "3-oxo-4-methyl-pentanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00846m" + - name: "3-oxo-5(S),12(R)-dihydroxy-eicosa-8-trans-6,14-cis-trienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00846x" + - name: "3-oxo-5(S),12(R)-dihydroxy-eicosa-8-trans-6,14-cis-trienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00847m" + - name: "3-oxo-6(R)-hydroxy-tetradec-8-cis-enoate" + - compartment: "m" + - !!omap + - id: "MAM00848m" + - name: "3-oxo-6(S)-hydroxy-tetradec-(8Z)-enoate" + - compartment: "m" + - !!omap + - id: "MAM00849m" + - name: "3-oxo-7-hexadecenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00849x" + - name: "3-oxo-7-hexadecenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00850m" + - name: "3-oxo-8(R)-hydroxy-hexadeca-(6E,10Z)-dienoate" + - compartment: "m" + - !!omap + - id: "MAM00851m" + - name: "3-oxo-8(S)-hydroxy-hexadeca-(6E,10Z)-dienoate" + - compartment: "m" + - !!omap + - id: "MAM00852c" + - name: "3-oxo-9-cis-eicosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00853x" + - name: "3-oxo-all-cis-6,9,12,15,18-tetracosapentaenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00854m" + - name: "3-oxo-cis,cis-5,8-tetradecadienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00854x" + - name: "3-oxo-cis,cis-5,8-tetradecadienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00855m" + - name: "3-oxo-cis,cis-7,10-hexadecadienoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00855x" + - name: "3-oxo-cis,cis-7,10-hexadecadienoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00856c" + - name: "3-oxo-cis-15-tetracosaenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00856x" + - name: "3-oxo-cis-15-tetracosaenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00857c" + - name: "3-oxodecanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00858m" + - name: "3-oxodecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00858x" + - name: "3-oxodecanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00859c" + - name: "3-oxo-dihomo-gamma-linolenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00860c" + - name: "3-oxodocasa-cis,cis-13,16-dienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00861c" + - name: "3-oxo-docosa-10,13,16,19-all-cis-tetraenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00862c" + - name: "3-oxo-docosa-13,16,19-all-cis-trienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00863c" + - name: "3-oxo-docosa-7,10,13,16,19-all-cis-pentaenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00864c" + - name: "3-oxo-docosa-7,10,13,16-all-cis-tetraenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00865c" + - name: "3-oxo-docosa-cis,cis,cis-10,13,16-trienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00866c" + - name: "3-oxodocosanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00866m" + - name: "3-oxodocosanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00866x" + - name: "3-oxodocosanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00867c" + - name: "3-oxododecanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00868m" + - name: "3-oxododecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00868x" + - name: "3-oxododecanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00869c" + - name: "3-oxoeicosa-cis,cis,cis-11,14,17-trienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00870c" + - name: "3-oxoeicosa-cis,cis-11,14-dienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00871c" + - name: "3-oxo-eicosadienoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00872c" + - name: "3-oxoeicosanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00872m" + - name: "3-oxoeicosanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00872x" + - name: "3-oxoeicosanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00873c" + - name: "3-oxoheneicosanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00873m" + - name: "3-oxoheneicosanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00874c" + - name: "3-oxoheptadecanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00875m" + - name: "3-oxoheptadecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00876c" + - name: "3-oxoheptanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00877m" + - name: "3-oxoheptanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00878c" + - name: "3-oxohexacosanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00878x" + - name: "3-oxohexacosanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00879c" + - name: "3-oxo-hexacosenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00879x" + - name: "3-oxo-hexacosenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00880c" + - name: "3-oxohexadecanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00881c" + - name: "3-oxohexanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00882m" + - name: "3-oxohexanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00882x" + - name: "3-oxohexanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00883m" + - name: "3-oxolaur-6-cis-enoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00883x" + - name: "3-oxolaur-6-cis-enoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00884m" + - name: "3-oxolinoleoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00884x" + - name: "3-oxolinoleoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00885m" + - name: "3-oxomyrist-5-enoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00885x" + - name: "3-oxomyrist-5-enoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00886m" + - name: "3-oxomyrist-7-enoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00886x" + - name: "3-oxomyrist-7-enoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00887c" + - name: "3-oxononadecanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00887m" + - name: "3-oxononadecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00888c" + - name: "3-oxononanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00889m" + - name: "3-oxononanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00890c" + - name: "3-oxooctadecanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00890m" + - name: "3-oxooctadecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00890x" + - name: "3-oxooctadecanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00891c" + - name: "3-oxooctanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00892m" + - name: "3-oxooctanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00892x" + - name: "3-oxooctanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00893m" + - name: "3-oxooleoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00893x" + - name: "3-oxooleoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00894m" + - name: "3-oxopalmitoleoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00894x" + - name: "3-oxopalmitoleoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00895m" + - name: "3-oxopalmitoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00895x" + - name: "3-oxopalmitoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00896c" + - name: "3-oxopentadecanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00897m" + - name: "3-oxopentadecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00898c" + - name: "3-oxopentanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00899m" + - name: "3-oxopentanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00900m" + - name: "3-oxopropanoate" + - compartment: "m" + - !!omap + - id: "MAM00901c" + - name: "3-oxo-tetracosa-12,15,18,21-all-cis-tetraenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00902c" + - name: "3-oxo-tetracosa-9,12,15,18,21-all-cis-pentaenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00903c" + - name: "3-oxo-tetracosa-9,12,15,18-all-cis-tetraenoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00904c" + - name: "3-oxotetracosanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00904x" + - name: "3-oxotetracosanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00905c" + - name: "3-oxotetradecanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00906m" + - name: "3-oxotetradecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00906x" + - name: "3-oxotetradecanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00907c" + - name: "3-oxotricosanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00908c" + - name: "3-oxotridecanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00909m" + - name: "3-oxotridecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00910c" + - name: "3-oxoundecanoyl-[ACP]" + - compartment: "c" + - !!omap + - id: "MAM00911m" + - name: "3-oxoundecanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00912c" + - name: "3-phosphoadenylylselenate" + - compartment: "c" + - !!omap + - id: "MAM00913c" + - name: "3-phospho-D-glycerate" + - compartment: "c" + - !!omap + - id: "MAM00913m" + - name: "3-phospho-D-glycerate" + - compartment: "m" + - !!omap + - id: "MAM00914c" + - name: "3-phosphonooxypyruvate" + - compartment: "c" + - !!omap + - id: "MAM00916c" + - name: "3-phosphoserine" + - compartment: "c" + - !!omap + - id: "MAM00917c" + - name: "3-succinoylpyridine" + - compartment: "c" + - !!omap + - id: "MAM00918c" + - name: "3-sulfinoalanine" + - compartment: "c" + - !!omap + - id: "MAM00918m" + - name: "3-sulfinoalanine" + - compartment: "m" + - !!omap + - id: "MAM00919c" + - name: "3-sulfinylpyruvic acid" + - compartment: "c" + - !!omap + - id: "MAM00919m" + - name: "3-sulfinylpyruvic acid" + - compartment: "m" + - !!omap + - id: "MAM00920c" + - name: "3-sulfopyruvate" + - compartment: "c" + - !!omap + - id: "MAM00920m" + - name: "3-sulfopyruvate" + - compartment: "m" + - !!omap + - id: "MAM00923c" + - name: "3-ureidopropionate" + - compartment: "c" + - !!omap + - id: "MAM00924c" + - name: "4-(2-amino-3-hydroxyphenyl)-2,4-dioxobutanoate" + - compartment: "c" + - !!omap + - id: "MAM00925c" + - name: "4-(2-amino-3-hydroxyphenyl)-4-oxobutanoic acid-O-glucoside" + - compartment: "c" + - !!omap + - id: "MAM00926c" + - name: "4-(2-aminophenyl)-2,4-dioxobutanoate" + - compartment: "c" + - !!omap + - id: "MAM00927c" + - name: "4-(methylnitrosamino)-1-(1-oxido-3-pyridinyl)-1-butanone" + - compartment: "c" + - !!omap + - id: "MAM00928c" + - name: "4-(methylnitrosamino)-1-(3-pyridyl)-1-butanol glucuronide" + - compartment: "c" + - !!omap + - id: "MAM00929c" + - name: "4-(methylnitrosamino)-1-(3-pyridyl)-1-butanol" + - compartment: "c" + - !!omap + - id: "MAM00930c" + - name: "4-(methylnitrosamino)-1-(3-pyridyl-N-oxide)-1-butanol" + - compartment: "c" + - !!omap + - id: "MAM00931c" + - name: "4-(nitrosoamino)-1-(3-pyridinyl)-1-butanone" + - compartment: "c" + - !!omap + - id: "MAM00932c" + - name: "4-(n-nitrosomethylamino)-1-(3-pyridyl)-1-butanone" + - compartment: "c" + - !!omap + - id: "MAM00932e" + - name: "4-(n-nitrosomethylamino)-1-(3-pyridyl)-1-butanone" + - compartment: "e" + - !!omap + - id: "MAM00933c" + - name: "4(R),8-dimethyl-nonanoyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM00933m" + - name: "4(R),8-dimethyl-nonanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00933x" + - name: "4(R),8-dimethyl-nonanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00934m" + - name: "4(R),8-dimethyl-trans-2-nonenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00935m" + - name: "4(R)-hydroxy-dodec-(6Z)-enoate" + - compartment: "m" + - !!omap + - id: "MAM00936m" + - name: "4(S)-hydroxy-dodec-(6Z)-enoate" + - compartment: "m" + - !!omap + - id: "MAM00937c" + - name: "4,4-dimethyl-14alpha-formyl-5alpha-cholesta-8,24-dien-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00938c" + - name: "4,4-dimethyl-14alpha-formyl-5alpha-cholesta-8-en-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00939c" + - name: "4,4-dimethyl-14alpha-hydroxymethyl-5alpha-cholesta-8,24-dien-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00940c" + - name: "4,4-dimethyl-14alpha-hydroxymethyl-5alpha-cholesta-8-en-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00941c" + - name: "4,4-dimethyl-5alpha-cholesta-8,14,24-trien-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00942c" + - name: "4,4-dimethyl-5alpha-cholesta-8,14-dien-3-beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00943c" + - name: "4,4-dimethyl-5alpha-cholesta-8-en-3-beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00944c" + - name: "4,5-dihydro-4-hydroxy-5-S-glutathionyl-benzo[a]pyrene" + - compartment: "c" + - !!omap + - id: "MAM00945c" + - name: "4,6,7-trihydroxy-1,2,3,4-tetrahydroisoquinoline" + - compartment: "c" + - !!omap + - id: "MAM00947c" + - name: "4,6-dihydroxyquinoline" + - compartment: "c" + - !!omap + - id: "MAM00948x" + - name: "4,8,12-trimethyltridecanoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00949c" + - name: "4,8-dihydroxyquinoline" + - compartment: "c" + - !!omap + - id: "MAM00950c" + - name: "4,8-dimethylnonanoylcarnitine" + - compartment: "c" + - !!omap + - id: "MAM00950m" + - name: "4,8-dimethylnonanoylcarnitine" + - compartment: "m" + - !!omap + - id: "MAM00951c" + - name: "4-[(hydroxymethyl)nitrosoamino]-1-(3-pyridinyl)-1-butanone" + - compartment: "c" + - !!omap + - id: "MAM00952c" + - name: "4-acetamidobutanoate" + - compartment: "c" + - !!omap + - id: "MAM00953c" + - name: "4alpha-carboxy-4beta-methyl-5alpha-cholesta-8,24-dien-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00954c" + - name: "4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00955c" + - name: "4alpha-carboxy-5alpha-cholesta-8,24-dien-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00956c" + - name: "4alpha-carboxy-5alpha-cholesta-8-en-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00957c" + - name: "4alpha-formyl-4beta-methyl-5alpha-cholesta-8,24-dien-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00958c" + - name: "4alpha-formyl-4beta-methyl-5alpha-cholesta-8-en-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00959c" + - name: "4alpha-formyl-5alpha-cholesta-8,24-dien-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00960c" + - name: "4alpha-formyl-5alpha-cholesta-8-en-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00961c" + - name: "4alpha-hydroxymethyl-4beta-methyl-5alpha-cholesta-8,24-dien-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00962c" + - name: "4alpha-hydroxymethyl-4beta-methyl-5alpha-cholesta-8-en-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00963c" + - name: "4alpha-hydroxymethyl-5alpha-cholesta-8,24-dien-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00964c" + - name: "4alpha-hydroxymethyl-5alpha-cholesta-8-en-3beta-ol" + - compartment: "c" + - !!omap + - id: "MAM00965c" + - name: "4alpha-hydroxytetrahydrobiopterin" + - compartment: "c" + - !!omap + - id: "MAM00965n" + - name: "4alpha-hydroxytetrahydrobiopterin" + - compartment: "n" + - !!omap + - id: "MAM00966c" + - name: "4alpha-methyl-5alpha-cholesta-8-en-3-one" + - compartment: "c" + - !!omap + - id: "MAM00967c" + - name: "4alpha-methyl-cholesta-8-enol" + - compartment: "c" + - !!omap + - id: "MAM00968c" + - name: "4alpha-methylzymosterol" + - compartment: "c" + - !!omap + - id: "MAM00969c" + - name: "4-aminobutanal" + - compartment: "c" + - !!omap + - id: "MAM00969e" + - name: "4-aminobutanal" + - compartment: "e" + - !!omap + - id: "MAM00970c" + - name: "4-aminobutyrate" + - compartment: "c" + - !!omap + - id: "MAM00970m" + - name: "4-aminobutyrate" + - compartment: "m" + - !!omap + - id: "MAM00970e" + - name: "4-aminobutyrate" + - compartment: "e" + - !!omap + - id: "MAM00971c" + - name: "4-androstene-3,17-dione" + - compartment: "c" + - !!omap + - id: "MAM00971r" + - name: "4-androstene-3,17-dione" + - compartment: "r" + - !!omap + - id: "MAM00972c" + - name: "4-bromo-3,5-cyclohexadiene-1,2-dione" + - compartment: "c" + - !!omap + - id: "MAM00973c" + - name: "4-bromocatechol" + - compartment: "c" + - !!omap + - id: "MAM00978c" + - name: "4-cholesten-7alpha,24(S)-diol-3-one" + - compartment: "c" + - !!omap + - id: "MAM00980m" + - name: "4-cis-decenoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM00980x" + - name: "4-cis-decenoyl-CoA" + - compartment: "x" + - !!omap + - id: "MAM00981c" + - name: "4-coumarate" + - compartment: "c" + - !!omap + - id: "MAM00983c" + - name: "4-hydroperoxy-2-nonenal" + - compartment: "c" + - !!omap + - id: "MAM00985c" + - name: "4-hydroxy-1-(3-pyridinyl)-1-butanone" + - compartment: "c" + - !!omap + - id: "MAM00986c" + - 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"nonanoyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM02617c" + - name: "noradrenaline" + - compartment: "c" + - !!omap + - id: "MAM02617e" + - name: "noradrenaline" + - compartment: "e" + - !!omap + - id: "MAM02620c" + - name: "norepinephrine sulfate" + - compartment: "c" + - !!omap + - id: "MAM02620e" + - name: "norepinephrine sulfate" + - compartment: "e" + - !!omap + - id: "MAM02622c" + - name: "normetanephrine" + - compartment: "c" + - !!omap + - id: "MAM02623c" + - name: "N-pantothenoylcysteine" + - compartment: "c" + - !!omap + - id: "MAM02623m" + - name: "N-pantothenoylcysteine" + - compartment: "m" + - !!omap + - id: "MAM02624c" + - name: "N-retinylidene-N-retinylethanolamine" + - compartment: "c" + - !!omap + - id: "MAM02629c" + - name: "O-1-alk-1-enyl-2-acyl-sn-glycero-3-phosphoethanolamine" + - compartment: "c" + - !!omap + - id: "MAM02630c" + - name: "O2" + - compartment: "c" + - !!omap + - id: "MAM02631c" + - name: "O2-" + - compartment: "c" + - !!omap + - id: 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"octadecenoylcarnitine(11)" + - compartment: "c" + - !!omap + - id: "MAM02638m" + - name: "octadecenoylcarnitine(11)" + - compartment: "m" + - !!omap + - id: "MAM02638r" + - name: "octadecenoylcarnitine(11)" + - compartment: "r" + - !!omap + - id: "MAM02639c" + - name: "octadecenoylcarnitine(5)" + - compartment: "c" + - !!omap + - id: "MAM02639m" + - name: "octadecenoylcarnitine(5)" + - compartment: "m" + - !!omap + - id: "MAM02639r" + - name: "octadecenoylcarnitine(5)" + - compartment: "r" + - !!omap + - id: "MAM02640c" + - name: "octadecenoylcarnitine(7)" + - compartment: "c" + - !!omap + - id: "MAM02640m" + - name: "octadecenoylcarnitine(7)" + - compartment: "m" + - !!omap + - id: "MAM02640r" + - name: "octadecenoylcarnitine(7)" + - compartment: "r" + - !!omap + - id: "MAM02642c" + - name: "octanoic acid" + - compartment: "c" + - !!omap + - id: "MAM02642e" + - name: "octanoic acid" + - compartment: "e" + - !!omap + - id: "MAM02643c" + - name: "octanoyl-[ACP]" + - compartment: "c" + 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"MAM02680c" + - name: "pantothenate" + - compartment: "c" + - !!omap + - id: "MAM02680e" + - name: "pantothenate" + - compartment: "e" + - !!omap + - id: "MAM02681c" + - name: "PAP" + - compartment: "c" + - !!omap + - id: "MAM02681g" + - name: "PAP" + - compartment: "g" + - !!omap + - id: "MAM02681l" + - name: "PAP" + - compartment: "l" + - !!omap + - id: "MAM02682c" + - name: "PAPS" + - compartment: "c" + - !!omap + - id: "MAM02682g" + - name: "PAPS" + - compartment: "g" + - !!omap + - id: "MAM02682l" + - name: "PAPS" + - compartment: "l" + - !!omap + - id: "MAM02683c" + - name: "paragloboside" + - compartment: "c" + - !!omap + - id: "MAM02684c" + - name: "PC-LD pool" + - compartment: "c" + - !!omap + - id: "MAM02684g" + - name: "PC-LD pool" + - compartment: "g" + - !!omap + - id: "MAM02684l" + - name: "PC-LD pool" + - compartment: "l" + - !!omap + - id: "MAM02684r" + - name: "PC-LD pool" + - compartment: "r" + - !!omap + - id: "MAM02684e" + - name: "PC-LD pool" + - compartment: "e" + 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"sn-glycerol-3-phosphate" + - compartment: "x" + - !!omap + - id: "MAM02920e" + - name: "spermidine dialdehyde" + - compartment: "e" + - !!omap + - id: "MAM02921e" + - name: "spermidine monoaldehyde 1" + - compartment: "e" + - !!omap + - id: "MAM02922e" + - name: "spermidine monoaldehyde 2" + - compartment: "e" + - !!omap + - id: "MAM02923c" + - name: "spermidine" + - compartment: "c" + - !!omap + - id: "MAM02923e" + - name: "spermidine" + - compartment: "e" + - !!omap + - id: "MAM02924e" + - name: "spermine dialdehyde" + - compartment: "e" + - !!omap + - id: "MAM02925e" + - name: "spermine monoaldehyde" + - compartment: "e" + - !!omap + - id: "MAM02926c" + - name: "spermine" + - compartment: "c" + - !!omap + - id: "MAM02926e" + - name: "spermine" + - compartment: "e" + - !!omap + - id: "MAM02927c" + - name: "sphinganine" + - compartment: "c" + - !!omap + - id: "MAM02927r" + - name: "sphinganine" + - compartment: "r" + - !!omap + - id: "MAM02928c" + - name: "sphinganine-1-phosphate" + 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"MAM02943x" + - name: "succinate" + - compartment: "x" + - !!omap + - id: "MAM02943e" + - name: "succinate" + - compartment: "e" + - !!omap + - id: "MAM02944c" + - name: "succinyl-CoA" + - compartment: "c" + - !!omap + - id: "MAM02944m" + - name: "succinyl-CoA" + - compartment: "m" + - !!omap + - id: "MAM02945e" + - name: "sucrose" + - compartment: "e" + - !!omap + - id: "MAM02946c" + - name: "sulfate" + - compartment: "c" + - !!omap + - id: "MAM02946l" + - name: "sulfate" + - compartment: "l" + - !!omap + - id: "MAM02946m" + - name: "sulfate" + - compartment: "m" + - !!omap + - id: "MAM02946r" + - name: "sulfate" + - compartment: "r" + - !!omap + - id: "MAM02946e" + - name: "sulfate" + - compartment: "e" + - !!omap + - id: "MAM02947c" + - name: "sulfatide galactocerebroside" + - compartment: "c" + - !!omap + - id: "MAM02947g" + - name: "sulfatide galactocerebroside" + - compartment: "g" + - !!omap + - id: "MAM02947l" + - name: "sulfatide galactocerebroside" + - compartment: "l" + - !!omap + - id: "MAM02948l" + - name: "sulfatide" + - compartment: "l" + - !!omap + - id: "MAM02949c" + - name: "sulfite" + - compartment: "c" + - !!omap + - id: "MAM02949m" + - name: "sulfite" + - compartment: "m" + - !!omap + - id: "MAM02949e" + - name: "sulfite" + - compartment: "e" + - !!omap + - id: "MAM02950c" + - name: "sulfochenodeoxycholate" + - compartment: "c" + - !!omap + - id: "MAM02950e" + - name: "sulfochenodeoxycholate" + - compartment: "e" + - !!omap + - id: "MAM02951e" + - name: "sulfoglycolithocholate" + - compartment: "e" + - !!omap + - id: "MAM02952c" + - name: "sulfotaurolithocholate" + - compartment: "c" + - !!omap + - id: "MAM02952e" + - name: "sulfotaurolithocholate" + - compartment: "e" + - !!omap + - id: "MAM02954c" + - name: "TAG epoxide" + - compartment: "c" + - !!omap + - id: "MAM02955c" + - name: "tagatose-1,6-bisphosphate" + - compartment: "c" + - !!omap + - id: "MAM02956e" + - name: "TAG-chylomicron pool" + - compartment: "e" + - !!omap + - id: "MAM02957e" + - name: "TAG-extraction" + - compartment: "e" + - !!omap + - id: "MAM02958c" + - name: "TAG-LD pool" + - compartment: "c" + - !!omap + - id: "MAM02959e" + - name: "TAG-VLDL pool" + - compartment: "e" + - !!omap + - id: "MAM02960g" + - name: "T-antigen" + - compartment: "g" + - !!omap + - id: "MAM02961c" + - name: "taurine" + - compartment: "c" + - !!omap + - id: "MAM02961x" + - name: "taurine" + - compartment: "x" + - !!omap + - id: "MAM02961e" + - name: "taurine" + - compartment: "e" + - !!omap + - id: "MAM02962c" + - name: "taurochenodeoxycholate" + - compartment: "c" + - !!omap + - id: "MAM02962e" + - name: "taurochenodeoxycholate" + - compartment: "e" + - !!omap + - id: "MAM02963c" + - name: "taurocholate" + - compartment: "c" + - !!omap + - id: "MAM02963e" + - name: "taurocholate" + - compartment: "e" + - !!omap + - id: "MAM02964c" + - name: "taurodeoxycholate" + - compartment: "c" + - !!omap + - id: "MAM02965c" + - name: "taurolithocholate" + - compartment: "c" + - !!omap + - id: "MAM02965x" + - name: "taurolithocholate" + - compartment: "x" + - !!omap + - id: "MAM02965e" + - name: "taurolithocholate" + - compartment: "e" + - !!omap + - id: "MAM02966c" + - name: "tauroursodeoxycholate" + - compartment: "c" + - !!omap + - id: "MAM02966e" + - name: "tauroursodeoxycholate" + - compartment: "e" + - !!omap + - id: "MAM02967c" + - name: "testosterone glucuronide" + - compartment: "c" + - !!omap + - id: "MAM02967r" + - name: "testosterone glucuronide" + - compartment: "r" + - !!omap + - id: "MAM02967e" + - name: "testosterone glucuronide" + - compartment: "e" + - !!omap + - id: "MAM02968e" + - name: "testosterone sulfate" + - compartment: "e" + - !!omap + - id: "MAM02969c" + - name: "testosterone" + - compartment: "c" + - !!omap + - id: "MAM02969r" + - name: "testosterone" + - compartment: "r" + - !!omap + - id: "MAM02969e" + - name: "testosterone" + - compartment: "e" + - !!omap + - id: "MAM02970c" + - name: "tetracosanoylcarnitine" + - compartment: 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"tetradecenoylcarnitine(7)" + - compartment: "c" + - !!omap + - id: "MAM02975m" + - name: "tetradecenoylcarnitine(7)" + - compartment: "m" + - !!omap + - id: "MAM02975r" + - name: "tetradecenoylcarnitine(7)" + - compartment: "r" + - !!omap + - id: "MAM02976c" + - name: "tetradecenoylcarnitine(9)" + - compartment: "c" + - !!omap + - id: "MAM02976m" + - name: "tetradecenoylcarnitine(9)" + - compartment: "m" + - !!omap + - id: "MAM02976r" + - name: "tetradecenoylcarnitine(9)" + - compartment: "r" + - !!omap + - id: "MAM02978c" + - name: "tetrahydrobiopterin" + - compartment: "c" + - !!omap + - id: "MAM02978n" + - name: "tetrahydrobiopterin" + - compartment: "n" + - !!omap + - id: "MAM02980c" + - name: "THF" + - compartment: "c" + - !!omap + - id: "MAM02980l" + - name: "THF" + - compartment: "l" + - !!omap + - id: "MAM02980m" + - name: "THF" + - compartment: "m" + - !!omap + - id: "MAM02980e" + - name: "THF" + - compartment: "e" + - !!omap + - id: "MAM02981c" + - name: "THF-hexaglutamate" + - compartment: "c" + - !!omap + - id: "MAM02982c" + - name: "thiamin" + - compartment: "c" + - !!omap + - id: "MAM02982e" + - name: "thiamin" + - compartment: "e" + - !!omap + - id: "MAM02983c" + - name: "thiamin-P" + - compartment: "c" + - !!omap + - id: "MAM02983m" + - name: "thiamin-P" + - compartment: "m" + - !!omap + - id: "MAM02983e" + - name: "thiamin-P" + - compartment: "e" + - !!omap + - id: "MAM02984c" + - name: "thiamin-PP" + - compartment: "c" + - !!omap + - id: "MAM02984m" + - name: "thiamin-PP" + - compartment: "m" + - !!omap + - id: "MAM02985c" + - name: "thiamin-PPP" + - compartment: "c" + - !!omap + - id: "MAM02985e" + - name: "thiamin-PPP" + - compartment: "e" + - !!omap + - id: "MAM02986c" + - name: "thiocyanate" + - compartment: "c" + - !!omap + - id: "MAM02986m" + - name: "thiocyanate" + - compartment: "m" + - !!omap + - id: "MAM02986e" + - name: "thiocyanate" + - compartment: "e" + - !!omap + - id: "MAM02990c" + - name: "thioredoxin" + - compartment: "c" + - !!omap + - id: "MAM02990m" + - name: "thioredoxin" + - compartment: "m" + - !!omap + - id: "MAM02990n" + - name: "thioredoxin" + - compartment: "n" + - !!omap + - id: "MAM02991c" + - name: "thiosulfate" + - compartment: "c" + - !!omap + - id: "MAM02991m" + - name: "thiosulfate" + - compartment: "m" + - !!omap + - id: "MAM02991e" + - name: "thiosulfate" + - compartment: "e" + - !!omap + - id: "MAM02993c" + - name: "threonine" + - compartment: "c" + - !!omap + - id: "MAM02993l" + - name: "threonine" + - compartment: "l" + - !!omap + - id: "MAM02993m" + - name: "threonine" + - compartment: "m" + - !!omap + - id: "MAM02993e" + - name: "threonine" + - compartment: "e" + - !!omap + - id: "MAM02994c" + - name: "thromboxane A2" + - compartment: "c" + - !!omap + - id: "MAM02994r" + - name: "thromboxane A2" + - compartment: "r" + - !!omap + - id: "MAM02994e" + - name: "thromboxane A2" + - compartment: "e" + - !!omap + - id: "MAM02995c" + - name: "thromboxane B2" + - compartment: "c" + - !!omap + 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ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000164329 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000115421 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000090060 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000090060 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000090060 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000115421 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000090060 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000164329 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000164329 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000164329 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000115421 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000115421 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184 and ENSG00000218823) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000164329 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184 and ENSG00000218823) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000090060 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000115421 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000164329 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184 and ENSG00000218823) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184 and ENSG00000218823) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184 and ENSG00000218823) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184 and ENSG00000218823)" + - !!omap + - id: "MAR07162" + - metabolites: !!omap + - MAM01285c: 0.18 + - MAM01424c: 0.3 + - MAM01948c: 0.34 + - MAM02751c: -1 + - MAM02847c: -1 + - MAM03106c: 0.18 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "(ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000090060 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000115421 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000164329 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000115421 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000090060 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000090060 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000090060 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000115421 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000090060 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000164329 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000164329 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000164329 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000115421 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000115421 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184 and ENSG00000218823) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000164329 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184 and ENSG00000218823) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000090060 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000083223 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000115421 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000164329 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184 and ENSG00000218823) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000134744 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184 and ENSG00000218823) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000113356 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184 and ENSG00000218823) or (ENSG00000005075 and ENSG00000013503 and ENSG00000047315 and ENSG00000058600 and ENSG00000066379 and ENSG00000068654 and ENSG00000099817 and ENSG00000099821 and ENSG00000100142 and ENSG00000100413 and ENSG00000102978 and ENSG00000105258 and ENSG00000107951 and ENSG00000121851 and ENSG00000125630 and ENSG00000132664 and ENSG00000137054 and ENSG00000144231 and ENSG00000147669 and ENSG00000148606 and ENSG00000149016 and ENSG00000161980 and ENSG00000163882 and ENSG00000168002 and ENSG00000168495 and ENSG00000171453 and ENSG00000177700 and ENSG00000181222 and ENSG00000186141 and ENSG00000186184 and ENSG00000218823)" + - !!omap + - id: "MAR07163" + - metabolites: !!omap + - MAM01639n: 0.3 + - MAM01644n: 0.2 + - MAM01686n: 0.2 + - MAM01721n: -1 + - MAM01752n: 0.3 + - MAM02039n: 1 + - MAM02040n: -1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "(ENSG00000113456 and ENSG00000172613) or ENSG00000183479 or ENSG00000213689" + - !!omap + - id: "MAR07164" + - metabolites: !!omap + - MAM01334c: 0.18 + - MAM01590c: 0.3 + - MAM02016c: 0.34 + - MAM02039c: 1 + - MAM02040c: -1 + - MAM02847c: -1 + - MAM03114c: 0.18 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "(ENSG00000113456 and ENSG00000172613) or ENSG00000183479 or ENSG00000213689" + - !!omap + - id: "MAR07713" + - name: "adenosine 5'-monophosphate phosphohydrolase" + - metabolites: !!omap + - MAM01280l: 1 + - MAM01334l: -1 + - MAM02040l: -1 + - MAM02751l: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000076685 or ENSG00000116981 or ENSG00000122643 or ENSG00000125458 or ENSG00000135318 or ENSG00000141698 or ENSG00000185013 or ENSG00000205309" + - !!omap + - id: "MAR07716" + - name: "uridine 5'-monophosphate phosphohydrolase" + - metabolites: !!omap + - MAM02040l: -1 + - MAM02751l: 1 + - MAM03114l: -1 + - MAM03123l: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000076685 or ENSG00000116981 or ENSG00000122643 or ENSG00000125458 or ENSG00000135318 or ENSG00000141698 or ENSG00000185013 or ENSG00000205309" + - !!omap + - id: "MAR07717" + - name: "uridine 5'-monophosphate phosphohydrolase" + - metabolites: !!omap + - MAM02040m: -1 + - MAM02751m: 1 + - MAM03114m: -1 + - MAM03123m: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000076685 or ENSG00000116981 or ENSG00000122643 or ENSG00000125458 or ENSG00000135318 or ENSG00000141698 or ENSG00000185013 or ENSG00000205309" + - !!omap + - id: "MAR07721" + - name: "cytidine-5'-monophosphate phosphohydrolase" + - metabolites: !!omap + - MAM01590l: -1 + - MAM01630l: 1 + - MAM02040l: -1 + - MAM02751l: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000076685 or ENSG00000116981 or ENSG00000122643 or ENSG00000125458 or ENSG00000135318 or ENSG00000141698 or ENSG00000185013 or ENSG00000205309" + - !!omap + - id: "MAR07725" + - name: "thymidylate 5'-phosphohydrolase" + - metabolites: !!omap + - MAM01752l: -1 + - MAM02040l: -1 + - MAM02751l: 1 + - MAM02996l: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000076685 or ENSG00000116981 or ENSG00000122643 or ENSG00000125458 or ENSG00000135318 or ENSG00000141698 or ENSG00000185013 or ENSG00000205309" + - !!omap + - id: "MAR07728" + - name: "guanosine 5'-monophosphate phosphohydrolase" + - metabolites: !!omap + - MAM02016l: -1 + - MAM02038l: 1 + - MAM02040l: -1 + - MAM02751l: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000076685 or ENSG00000116981 or ENSG00000122643 or ENSG00000125458 or ENSG00000135318 or ENSG00000141698 or ENSG00000185013 or ENSG00000205309" + - !!omap + - id: "MAR07801" + - metabolites: !!omap + - MAM01285m: -1 + - MAM01334m: 1 + - MAM01948m: -1 + - MAM02034m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000147853" + - !!omap + - id: "MAR07863" + - metabolites: !!omap + - MAM01424c: -1 + - MAM01623c: 1 + - MAM03106c: -1 + - MAM03114c: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000162368" + - !!omap + - id: "MAR07864" + - metabolites: !!omap + - MAM01424n: -1 + - MAM01623n: 1 + - MAM03106n: -1 + - MAM03114n: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000162368" + - !!omap + - id: "MAR07865" + - metabolites: !!omap + - MAM03106c: -2 + - MAM03114c: 1 + - MAM03130c: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000162368" + - !!omap + - id: "MAR07866" + - metabolites: !!omap + - MAM03106n: -2 + - MAM03114n: 1 + - MAM03130n: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000162368" + - !!omap + - id: "MAR07867" + - metabolites: !!omap + - MAM01948c: -1 + - MAM02034c: 1 + - MAM03106c: -1 + - MAM03114c: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000162368" + - !!omap + - id: "MAR07868" + - metabolites: !!omap + - MAM01948n: -1 + - MAM02034n: 1 + - MAM03106n: -1 + - MAM03114n: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000162368" + - !!omap + - id: "MAR07869" + - metabolites: !!omap + - MAM01637c: -1 + - MAM01642c: 1 + - MAM03106c: -1 + - MAM03114c: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000162368" + - !!omap + - id: "MAR07870" + - metabolites: !!omap + - MAM01637n: -1 + - MAM01642n: 1 + - MAM03106n: -1 + - MAM03114n: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000162368" + - !!omap + - id: "MAR07871" + - metabolites: !!omap + - MAM01643c: -1 + - MAM01645c: 1 + - MAM03106c: -1 + - MAM03114c: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000162368" + - !!omap + - id: "MAR07872" + - metabolites: !!omap + - MAM01643n: -1 + - MAM01645n: 1 + - MAM03106n: -1 + - MAM03114n: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000162368" + - !!omap + - id: "MAR07873" + - metabolites: !!omap + - MAM01680c: -1 + - MAM01688c: 1 + - MAM03106c: -1 + - MAM03114c: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000162368" + - !!omap + - id: "MAR07874" + - metabolites: !!omap + - MAM01680n: -1 + - MAM01688n: 1 + - MAM03106n: -1 + - MAM03114n: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000162368" + - !!omap + - id: "MAR07875" + - name: "ATP:UMP phosphotransferase" + - metabolites: !!omap + - MAM01285m: -1 + - MAM01371m: 1 + - MAM03106m: -1 + - MAM03114m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000134326" + - !!omap + - id: "MAR07876" + - name: "ATP:UMP phosphotransferase" + - metabolites: !!omap + - MAM01285n: -1 + - MAM01371n: 1 + - MAM03106n: -1 + - MAM03114n: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000162368" + - !!omap + - id: "MAR07878" + - name: "ATP:dIDP phosphotransferase" + - metabolites: !!omap + - MAM01285c: -1 + - MAM01371c: 1 + - MAM01693c: 1 + - MAM01714c: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000103024 or ENSG00000103202 or ENSG00000143156 or ENSG00000172113 or ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR07879" + - metabolites: !!omap + - MAM01709c: 1 + - MAM01714c: -1 + - MAM02039c: 1 + - MAM02040c: -1 + - MAM02759c: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000125877" + - !!omap + - id: "MAR07880" + - metabolites: !!omap + - MAM01671c: 1 + - MAM01709c: -1 + - MAM02040c: -1 + - MAM02751c: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000125458" + - !!omap + - id: "MAR07881" + - name: "ATP:dIDP phosphotransferase" + - metabolites: !!omap + - MAM01285n: -1 + - MAM01371n: 1 + - MAM01693n: 1 + - MAM01714n: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR07882" + - name: "ATP:GDP phosphotransferase" + - metabolites: !!omap + - MAM01285n: -1 + - MAM01371n: 1 + - MAM01948n: 1 + - MAM02034n: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR07883" + - name: "ATP:UDP phosphotransferase" + - metabolites: !!omap + - MAM01285m: -1 + - MAM01371m: 1 + - MAM03106m: 1 + - MAM03130m: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000103024 or ENSG00000103202 or ENSG00000143156 or ENSG00000155085 or ENSG00000172113 or ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR07884" + - name: "ATP:UDP phosphotransferase" + - metabolites: !!omap + - MAM01285n: -1 + - MAM01371n: 1 + - MAM03106n: 1 + - MAM03130n: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR07885" + - name: "ATP:CDP phosphotransferase" + - metabolites: !!omap + - MAM01285n: -1 + - MAM01371n: 1 + - MAM01424n: 1 + - MAM01623n: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR07886" + - name: "ATP:dTDP phosphotransferase" + - metabolites: !!omap + - MAM01285m: -1 + - MAM01371m: 1 + - MAM01747m: 1 + - MAM01753m: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000103024 or ENSG00000103202 or ENSG00000143156 or ENSG00000155085 or ENSG00000172113 or ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR07887" + - name: "ATP:dTDP phosphotransferase" + - metabolites: !!omap + - MAM01285n: -1 + - MAM01371n: 1 + - MAM01747n: 1 + - MAM01753n: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR07888" + - name: "ATP:dGDP phosphotransferase" + - metabolites: !!omap + - MAM01285n: -1 + - MAM01371n: 1 + - MAM01680n: 1 + - MAM01688n: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR07889" + - name: "ATP:dUDP phosphotransferase" + - metabolites: !!omap + - MAM01285n: -1 + - MAM01371n: 1 + - MAM01754n: 1 + - MAM01756n: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR07890" + - name: "ATP:dCDP phosphotransferase" + - metabolites: !!omap + - MAM01285m: -1 + - MAM01371m: 1 + - MAM01643m: 1 + - MAM01645m: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000103024 or ENSG00000103202 or ENSG00000143156 or ENSG00000155085 or ENSG00000172113 or ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR07891" + - name: "ATP:dCDP phosphotransferase" + - metabolites: !!omap + - MAM01285n: -1 + - MAM01371n: 1 + - MAM01643n: 1 + - MAM01645n: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR07892" + - name: "ATP:dADP phosphotransferase" + - metabolites: !!omap + - MAM01285n: -1 + - MAM01371n: 1 + - MAM01637n: 1 + - MAM01642n: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR07893" + - name: "ATP:IDP phosphotransferase" + - metabolites: !!omap + - MAM01285n: -1 + - MAM01371n: 1 + - MAM02161n: 1 + - MAM02193n: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000239672 or ENSG00000243678" + - !!omap + - id: "MAR08083" + - name: "Guanosine 3',5'-cyclic phosphate 5'-nucleotidohydrolase" + - metabolites: !!omap + - MAM01433n: -1 + - MAM02016n: 1 + - MAM02039n: 1 + - MAM02040n: -1 + - 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"ENSG00000122729" + - !!omap + - id: "MAR04458" + - name: "citrate hydro-lyase (cis-aconitate-forming)" + - metabolites: !!omap + - MAM01580m: -1 + - MAM01587m: 1 + - MAM02040m: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000100412" + - !!omap + - id: "MAR04465" + - name: "D-glycerate:NADP+ 2-oxidoreductase" + - metabolites: !!omap + - MAM01982c: 1 + - MAM02039c: -1 + - MAM02154c: -1 + - MAM02554c: 1 + - MAM02555c: -1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000137106" + - !!omap + - id: "MAR04589" + - name: "isocitrate hydro-lyase (cis-aconitate-forming)" + - metabolites: !!omap + - MAM01580m: -1 + - MAM02040m: -1 + - MAM02183m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000100412" + - !!omap + - id: "MAR04652" + - name: "succinate:quinone oxidoreductase" + - metabolites: !!omap + - MAM01862m: -1 + - MAM02943m: 1 + - MAM03102m: -1 + - MAM03103m: 1 + - lower_bound: -1000 + - 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"MAR03977" + - name: "diphosphate phosphohydrolase" + - metabolites: !!omap + - MAM02039c: 1 + - MAM02040c: -1 + - MAM02751c: 2 + - MAM02759c: -1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000107902 or ENSG00000138777 or ENSG00000143363 or ENSG00000180817" + - !!omap + - id: "MAR03979" + - name: "diphosphate phosphohydrolase" + - metabolites: !!omap + - MAM02039x: 1 + - MAM02040x: -1 + - MAM02751x: 2 + - MAM02759x: -1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000107902 or ENSG00000138777 or ENSG00000143363 or ENSG00000180817" + - !!omap + - id: "MAR06911" + - metabolites: !!omap + - MAM01802m: 1 + - MAM01803m: -1 + - MAM03102m: 1 + - MAM03103m: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000073578 and ENSG00000117118 and ENSG00000143252 and ENSG00000204370" + - !!omap + - id: "MAR06912" + - name: "diphosphate phosphohydrolase" + - metabolites: !!omap + - MAM02039m: 1 + - MAM02040m: -1 + - 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ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000112695 and ENSG00000126267 and ENSG00000127184 and ENSG00000131143 and ENSG00000131174 and ENSG00000135940 and ENSG00000156885 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000111775 and ENSG00000126267 and ENSG00000127184 and ENSG00000131055 and ENSG00000131174 and ENSG00000135940 and ENSG00000161281 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000111775 and ENSG00000126267 and ENSG00000127184 and ENSG00000131143 and ENSG00000131174 and ENSG00000135940 and ENSG00000161281 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000112695 and ENSG00000127184 and ENSG00000131055 and ENSG00000131174 and ENSG00000135940 and ENSG00000156885 and ENSG00000160471 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000112695 and ENSG00000127184 and ENSG00000131143 and ENSG00000131174 and ENSG00000135940 and ENSG00000156885 and ENSG00000160471 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000111775 and ENSG00000127184 and ENSG00000131055 and ENSG00000131174 and ENSG00000135940 and ENSG00000160471 and ENSG00000161281 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000111775 and ENSG00000127184 and ENSG00000131143 and ENSG00000131174 and ENSG00000135940 and ENSG00000160471 and ENSG00000161281 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000126267 and ENSG00000127184 and ENSG00000131055 and ENSG00000131174 and ENSG00000135940 and ENSG00000156885 and ENSG00000161281 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000126267 and ENSG00000127184 and ENSG00000131143 and ENSG00000131174 and ENSG00000135940 and ENSG00000156885 and ENSG00000161281 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000127184 and ENSG00000131055 and ENSG00000131174 and ENSG00000135940 and ENSG00000156885 and ENSG00000160471 and ENSG00000161281 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000127184 and ENSG00000131143 and ENSG00000131174 and ENSG00000135940 and ENSG00000156885 and ENSG00000160471 and ENSG00000161281 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000111775 and ENSG00000112695 and ENSG00000126267 and ENSG00000127184 and ENSG00000131143 and ENSG00000131174 and ENSG00000135940 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000111775 and ENSG00000112695 and ENSG00000127184 and ENSG00000131055 and ENSG00000131174 and ENSG00000135940 and ENSG00000160471 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938) or (ENSG00000111775 and ENSG00000112695 and ENSG00000127184 and ENSG00000131143 and ENSG00000131174 and ENSG00000135940 and ENSG00000160471 and ENSG00000164919 and ENSG00000170516 and ENSG00000176340 and ENSG00000178741 and ENSG00000189043 and ENSG00000198712 and ENSG00000198804 and ENSG00000198938)" + - !!omap + - id: "MAR06916" + - name: "ATP phosphohydrolase" + - metabolites: !!omap + - MAM01285m: -1 + - MAM01371m: 1 + - MAM02039i: -3 + - MAM02039m: 2 + - MAM02040m: 1 + - MAM02751m: -1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000099624 and ENSG00000110955 and ENSG00000116459 and ENSG00000124172 and ENSG00000135390 and ENSG00000152234 and ENSG00000154518 and ENSG00000154723 and ENSG00000156411 and ENSG00000159199 and ENSG00000165629 and ENSG00000167283 and ENSG00000167863 and ENSG00000169020 and ENSG00000173915 and ENSG00000180389 and ENSG00000198899 and ENSG00000228253 and ENSG00000241468 and ENSG00000241837 and ENSG00000249222" + - !!omap + - id: "MAR06918" + - metabolites: !!omap + - MAM01824m: -2 + - MAM01826m: 2 + - MAM02039i: 4 + - MAM02039m: -2 + - MAM03102m: -1 + - MAM03103m: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000010256 and ENSG00000127540 and ENSG00000140740 and ENSG00000156467 and ENSG00000164405 and ENSG00000169021 and ENSG00000173660 and ENSG00000179091 and ENSG00000184076 and ENSG00000198727" + - !!omap + - id: "MAR06921" + - name: "NADH:ubiquinone oxidoreductase" + - metabolites: !!omap + - MAM02039i: 4 + - MAM02039m: -5 + - MAM02552m: 1 + - MAM02553m: -1 + - MAM03102m: 1 + - MAM03103m: -1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000004779 and ENSG00000023228 and ENSG00000065518 and ENSG00000090266 and ENSG00000099795 and ENSG00000109390 and ENSG00000110717 and ENSG00000115286 and ENSG00000119013 and ENSG00000119421 and ENSG00000125356 and ENSG00000128609 and ENSG00000130414 and ENSG00000131495 and ENSG00000136521 and ENSG00000139180 and ENSG00000140990 and ENSG00000145494 and ENSG00000147123 and ENSG00000147684 and ENSG00000151366 and ENSG00000158864 and ENSG00000160194 and ENSG00000164258 and ENSG00000165264 and ENSG00000166136 and ENSG00000167792 and ENSG00000168653 and ENSG00000170906 and ENSG00000174886 and ENSG00000178127 and ENSG00000183648 and ENSG00000184752 and ENSG00000184983 and ENSG00000186010 and ENSG00000189043 and ENSG00000198695 and ENSG00000198763 and ENSG00000198786 and ENSG00000198840 and ENSG00000198886 and ENSG00000198888 and ENSG00000212907 and ENSG00000213619 and ENSG00000267855" + - !!omap + - id: "MAR03960" + - name: "superoxide:superoxide oxidoreductase" + - metabolites: !!omap + - MAM02039c: -2 + - MAM02041c: 1 + - MAM02630c: 1 + - MAM02631c: -2 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000109610 or ENSG00000112096 or ENSG00000142168" + - !!omap + - id: "MAR03980" + - name: "hydrogen-peroxide:hydrogen-peroxide oxidoreductase" + - metabolites: !!omap + - 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ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000151418 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147614 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147614 and ENSG00000151418 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000213760) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000147614 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000151418 and ENSG00000159720 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000151418 and ENSG00000159720 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000151418 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147614 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147614 and ENSG00000151418 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147614 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000147614 and ENSG00000155097 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000147614 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000213760) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000147614 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000213760) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000151418 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000147614 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185344 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000185344 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000155097 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000147614 and ENSG00000185344 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185344 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000151418 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000151418 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147614 and ENSG00000151418 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000147614 and ENSG00000155097 and ENSG00000185344 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000159720 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147614 and ENSG00000151418 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147614 and ENSG00000151418 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147614 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000151418 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000147614 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147614 and ENSG00000151418 and ENSG00000185344 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000151418 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147614 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185344 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000151418 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147614 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147614 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185344 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000151418 and ENSG00000159720 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147614 and ENSG00000155097 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000151418 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185883 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000147614 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000155097 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000147614 and ENSG00000155097 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147614 and ENSG00000151418 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000151418 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000151418 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000155097 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147614 and ENSG00000151418 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000155097 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000147614 and ENSG00000151418 and ENSG00000155097 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000151418 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147614 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000151418 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883) or (ENSG00000033627 and ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883 and ENSG00000213760 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000155097 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000151418 and ENSG00000155097 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000136888 and ENSG00000143882 and ENSG00000147416 and ENSG00000159720 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565) or (ENSG00000047249 and ENSG00000100554 and ENSG00000110719 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000147416 and ENSG00000147614 and ENSG00000155097 and ENSG00000185883 and ENSG00000213760) or (ENSG00000047249 and ENSG00000100554 and ENSG00000105929 and ENSG00000113732 and ENSG00000114573 and ENSG00000116039 and ENSG00000117410 and ENSG00000128524 and ENSG00000131100 and ENSG00000136888 and ENSG00000155097 and ENSG00000159720 and ENSG00000185883) or (ENSG00000047249 and ENSG00000100554 and ENSG00000113732 and ENSG00000114573 and ENSG00000117410 and ENSG00000128524 and ENSG00000143882 and ENSG00000147416 and ENSG00000147614 and ENSG00000151418 and ENSG00000185344 and ENSG00000185883 and ENSG00000250565)" + - !!omap + - id: "MAR00081" + - name: "UDP-GlcNac:Betagal Beta-1, 3-N-Acetylglucosaminyltransferase 3, Golgi Apparatus" + - metabolites: !!omap + - MAM02039g: 1 + - MAM02593g: -1 + - MAM02594g: 1 + - MAM03106g: 1 + - MAM03107g: -1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000179913" + - !!omap + - id: "MAR00082" + - name: "UDP-GlcNac:Betagal Beta-1, 3-N-Acetylglucosaminyltransferase 3, Golgi Apparatus" + - metabolites: !!omap + - MAM01880g: -1 + - MAM02039g: 1 + - MAM03106g: 1 + - MAM03107g: -1 + - MAM03584g: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000179913" + - !!omap + - id: "MAR00084" + - name: "Bile Acid Coenzyme A: Amino Acid N-Acyltransferase" + - metabolites: !!omap + - MAM01597x: 1 + - MAM01986x: -1 + - MAM01987x: 1 + - MAM03548x: -1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000136881" + - !!omap + - id: "MAR00086" + - name: "Biotin-[Acetyl Coenzyme A-Carboxylase] Ligase, Mitochondrial" + - metabolites: !!omap + - MAM01371m: -1 + - MAM01401m: -1 + - MAM01402m: 1 + - MAM02039m: -1 + - MAM02759m: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000159267" + - !!omap + - id: "MAR00089" + - name: "Glucuronidated Compound Transport" + - metabolites: !!omap + - MAM01397c: -1 + - MAM01397r: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - !!omap + - id: "MAR00091" + - name: "Biotinidase (Biotin), Mitochondrial" + - metabolites: !!omap + - MAM01400m: -1 + - MAM01401m: 1 + - MAM02040m: -1 + - MAM02426m: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000169814" + - !!omap + - id: "MAR00092" + - name: "Holocarboxylase Synthestase (Biotin Protein Ligase), Mitochondrial" + - metabolites: !!omap + - MAM01334m: 1 + - MAM01356m: -1 + - MAM01357m: 1 + - MAM01402m: -1 + - MAM02039m: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000159267" + - !!omap + - id: "MAR00094" + - name: "Biotin Transport via Sodium Symport" + - metabolites: !!omap + - MAM01285c: 1 + - MAM01371c: -1 + - MAM01401c: 1 + - MAM01401e: -1 + - MAM02039c: 1 + - MAM02040c: -1 + - MAM02519c: 1 + - MAM02519e: -1 + - MAM02751c: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000138074" + - !!omap + - id: "MAR00097" + - name: "Butyrate Mitochondrial Transport via Proton Symport, Reversible" + - metabolites: !!omap + - MAM01410c: -1 + - MAM01410m: 1 + - MAM02039c: -1 + - MAM02039m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000155380" + - !!omap + - id: "MAR00099" + - name: "Benzoate Transport (Diffusion)" + - metabolites: !!omap + - MAM01380c: 1 + - MAM01380e: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - !!omap + - id: "MAR00100" + - name: "Benzene Transporter, Endoplasmic Reticulum" + - metabolites: !!omap + - MAM01380c: -1 + - MAM01380r: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - !!omap + - id: "MAR00101" + - name: "C-14 Sterol Reductase" + - metabolites: !!omap + - MAM00367r: 1 + - MAM00941r: -1 + - MAM02039r: -1 + - MAM02554r: 1 + - MAM02555r: -1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000149809" + - !!omap + - id: "MAR00102" + - name: "C160 Transport into the Mitochondria" + - metabolites: !!omap + - MAM02411c: -1 + - MAM02411m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000178537" + - !!omap + - id: "MAR00103" + - name: "Carnitine O-Palmitoyltransferase" + - metabolites: !!omap + - MAM00051c: -1 + - MAM01597c: 1 + - MAM02117c: 1 + - MAM02348c: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000110090 or ENSG00000169169 or ENSG00000205560" + - !!omap + - id: "MAR00104" + - name: "C161 Transport into the Mitochondria" + - metabolites: !!omap + - MAM00051m: 1 + - MAM01597m: -1 + - MAM02117m: -1 + - MAM02348m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000157184" + - !!omap + - id: "MAR00105" + - name: "C161 Transport into the Mitochondria" + - metabolites: !!omap + - MAM02117c: -1 + - MAM02117m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000178537" + - !!omap + - id: "MAR00106" + - name: "C161 Transport into the Mitochondria" + - metabolites: !!omap + - MAM02676c: -1 + - MAM02676m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000178537" + - !!omap + - id: "MAR00107" + - name: "C180 Transport into the Mitochondria" + - metabolites: !!omap + - MAM02940c: -1 + - MAM02940m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000178537" + - !!omap + - id: "MAR00108" + - name: "Transport of Octadecenoyl Coenzyme A into Mitochondrial Matrix" + - metabolites: !!omap + - MAM01597c: 1 + - MAM02348c: -1 + - MAM02639c: 1 + - MAM02647c: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000110090 or ENSG00000169169 or ENSG00000205560" + - !!omap + - id: "MAR00109" + - name: "Transport of Octadecenoyl Coenzyme A into Mitochondrial Matrix" + - metabolites: !!omap + - MAM01597m: -1 + - MAM02348m: 1 + - MAM02639m: -1 + - MAM02647m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000157184" + - !!omap + - id: "MAR00110" + - name: "C181 Transport into the Mitochondria" + - metabolites: !!omap + - MAM02639c: -1 + - MAM02639m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000178537" + - !!omap + - id: "MAR00111" + - name: "Arachidonic Acid Transport into the Mitochondria" + - metabolites: !!omap + - MAM01363c: -1 + - MAM01363m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000178537" + - !!omap + - id: "MAR00112" + - name: "C226 Transport into the Mitochondria" + - metabolites: !!omap + - MAM01723c: -1 + - MAM01723m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - !!omap + - id: "MAR00113" + - name: "C-3 Sterol Dehydrogenase (4-Methylzymosterol)" + - metabolites: !!omap + - MAM00809r: 1 + - MAM00953r: -1 + - MAM01596r: 1 + - MAM02039r: 1 + - MAM02554r: -1 + - MAM02555r: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000147383" + - !!omap + - id: "MAR00114" + - name: "C-3 Sterol Dehydrogenase (4-Methylzymosterol)" + - metabolites: !!omap + - MAM00809r: 1 + - MAM00953r: -1 + - MAM01596r: 1 + - MAM02039r: 1 + - MAM02552r: -1 + - MAM02553r: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000147383" + - !!omap + - id: "MAR00115" + - name: "C-3 Sterol Keto Reductase (Zymosterol)" + - metabolites: !!omap + - MAM02039r: -1 + - MAM02554r: 1 + - MAM02555r: -1 + - MAM03158r: 1 + - MAM04082r: -1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000133835" + - !!omap + - id: "MAR00116" + - name: "C-4 Sterol Methyl Oxidase (4, 4-Dimethylzymosterol)" + - metabolites: !!omap + - MAM00367r: -1 + - MAM00953r: 1 + - MAM02039r: -3 + - MAM02040r: 4 + - MAM02554r: 3 + - MAM02555r: -3 + - MAM02630r: -3 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000052802" + - !!omap + - id: "MAR00117" + - name: "C-4 Methyl Sterol Oxidase" + - metabolites: !!omap + - MAM00809r: -1 + - MAM01596r: 1 + - MAM02039r: 1 + - MAM02554r: -1 + - MAM02555r: 1 + - MAM02630r: -1 + - MAM04082r: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000147383" + - !!omap + - id: "MAR00118" + - name: "C-4 Methyl Sterol Oxidase" + - metabolites: !!omap + - MAM00809r: -1 + - MAM01596r: 1 + - MAM02039r: 1 + - MAM02552r: -1 + - MAM02553r: 1 + - MAM02630r: -1 + - MAM04082r: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000052802 or ENSG00000147383" + - !!omap + - id: "MAR00119" + - name: "Ca ATPase" + - metabolites: !!omap + - MAM01285c: 1 + - MAM01371c: -1 + - MAM01413c: -1 + - MAM01413e: 1 + - MAM02039e: 1 + - MAM02040c: -1 + - MAM02751c: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000058668 or ENSG00000067842 or ENSG00000070961 or ENSG00000157087" + - !!omap + - id: "MAR00120" + - name: "Intracellular Transport" + - metabolites: !!omap + - MAM01427c: -1 + - MAM01427m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - !!omap + - id: "MAR00121" + - name: "Phosphatidate Cytidylyltransferase" + - metabolites: !!omap + - MAM01427c: 1 + - MAM01623c: -1 + - MAM02039c: -1 + - MAM02730c: -1 + - MAM02759c: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000101290 or ENSG00000163624" + - !!omap + - id: "MAR00122" + - name: "Phosphatidate Cytidylyltransferase" + - metabolites: !!omap + - MAM01427m: 1 + - MAM01623m: -1 + - MAM02039m: -1 + - MAM02730m: -1 + - MAM02759m: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000101290 or ENSG00000163624" + - !!omap + - id: "MAR00124" + - name: "Citrulline Mitochondrial Transport via Proton Antiport" + - metabolites: !!omap + - MAM01588c: 1 + - MAM01588m: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000102743 or ENSG00000120329" + - !!omap + - id: "MAR00125" + - name: "Citrate Transport, Mitochondrial" + - metabolites: !!omap + - MAM01587c: -1 + - MAM01587m: 1 + - MAM02439c: 1 + - MAM02439m: -1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "ENSG00000100075" + - !!omap + - id: "MAR00126" + - name: "Chloride Transport via Hydroxide Antiport (2:1)" + - metabolites: 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"ENSG00000185420" + - !!omap + - id: "ENSG00000185527" + - !!omap + - id: "ENSG00000185803" + - !!omap + - id: "ENSG00000185808" + - !!omap + - id: "ENSG00000185813" + - !!omap + - id: "ENSG00000185825" + - !!omap + - id: "ENSG00000185875" + - !!omap + - id: "ENSG00000185883" + - !!omap + - id: "ENSG00000185973" + - !!omap + - id: "ENSG00000186010" + - !!omap + - id: "ENSG00000186104" + - !!omap + - id: "ENSG00000186111" + - !!omap + - id: "ENSG00000186115" + - !!omap + - id: "ENSG00000186141" + - !!omap + - id: "ENSG00000186153" + - !!omap + - id: "ENSG00000186160" + - !!omap + - id: "ENSG00000186184" + - !!omap + - id: "ENSG00000186198" + - !!omap + - id: "ENSG00000186204" + - !!omap + - id: "ENSG00000186281" + - !!omap + - id: "ENSG00000186298" + - !!omap + - id: "ENSG00000186334" + - !!omap + - id: "ENSG00000186335" + - !!omap + - id: "ENSG00000186377" + - !!omap + - id: "ENSG00000186526" + - !!omap + - id: "ENSG00000186529" + - !!omap + - id: "ENSG00000186642" + - !!omap + - id: "ENSG00000186792" + - !!omap + - id: "ENSG00000186908" + - !!omap + - id: "ENSG00000187021" + - !!omap + - id: "ENSG00000187048" + - !!omap + - id: "ENSG00000187091" + - !!omap + - id: "ENSG00000187097" + - !!omap + - id: "ENSG00000187134" + - !!omap + - id: "ENSG00000187210" + - !!omap + - id: "ENSG00000187531" + - !!omap + - id: "ENSG00000187630" + - !!omap + - id: "ENSG00000187676" + - !!omap + - id: "ENSG00000187733" + - !!omap + - id: "ENSG00000187758" + - !!omap + - id: "ENSG00000188089" + - !!omap + - id: "ENSG00000188167" + - !!omap + - id: "ENSG00000188257" + - !!omap + - id: "ENSG00000188266" + - !!omap + - id: "ENSG00000188338" + - !!omap + - id: "ENSG00000188467" + - !!omap + - id: "ENSG00000188611" + - !!omap + - id: "ENSG00000188641" + - !!omap + - id: "ENSG00000188676" + - !!omap + - id: "ENSG00000188687" + - !!omap + - id: "ENSG00000188690" + - !!omap + - id: "ENSG00000188706" + - !!omap + - id: "ENSG00000188784" + - !!omap + - id: "ENSG00000188818" + - !!omap + - id: "ENSG00000188833" + - !!omap + - id: "ENSG00000188921" + - !!omap + - id: "ENSG00000189043" + - !!omap + - id: "ENSG00000189221" + - !!omap + - id: "ENSG00000196136" + - !!omap + - id: "ENSG00000196139" + - !!omap + - id: "ENSG00000196177" + - !!omap + - id: "ENSG00000196188" + - !!omap + - id: "ENSG00000196296" + - !!omap + - id: "ENSG00000196305" + - !!omap + - id: "ENSG00000196313" + - !!omap + - id: "ENSG00000196344" + - !!omap + - id: "ENSG00000196368" + - !!omap + - id: "ENSG00000196371" + - !!omap + - id: "ENSG00000196475" + - !!omap + - id: "ENSG00000196502" + - !!omap + - id: "ENSG00000196511" + - !!omap + - id: "ENSG00000196517" + - !!omap + - id: "ENSG00000196547" + - !!omap + - id: "ENSG00000196616" + - !!omap + - id: "ENSG00000196620" + - !!omap + - id: "ENSG00000196743" + - !!omap + - id: "ENSG00000196950" + - !!omap + - id: "ENSG00000196968" + - !!omap + - id: "ENSG00000197093" + - !!omap + - id: "ENSG00000197119" + - !!omap + - id: "ENSG00000197121" + - !!omap + - id: "ENSG00000197142" + - !!omap + - id: "ENSG00000197165" + - !!omap + - id: "ENSG00000197208" + - !!omap + - id: "ENSG00000197217" + - !!omap + - id: "ENSG00000197241" + - !!omap + - id: "ENSG00000197249" + - !!omap + - id: "ENSG00000197296" + - !!omap + - id: "ENSG00000197355" + - !!omap + - id: "ENSG00000197375" + - !!omap + - id: "ENSG00000197408" + - !!omap + - id: "ENSG00000197416" + - !!omap + - id: "ENSG00000197444" + - !!omap + - id: "ENSG00000197446" + - !!omap + - id: "ENSG00000197448" + - !!omap + - id: "ENSG00000197496" + - !!omap + - id: "ENSG00000197506" + - !!omap + - id: "ENSG00000197563" + - !!omap + - id: "ENSG00000197580" + - !!omap + - id: "ENSG00000197586" + - !!omap + - id: "ENSG00000197594" + - !!omap + - id: "ENSG00000197601" + - !!omap + - id: "ENSG00000197713" + - !!omap + - id: "ENSG00000197746" + - !!omap + - id: "ENSG00000197763" + - !!omap + - id: "ENSG00000197838" + - !!omap + - id: "ENSG00000197858" + - !!omap + - id: "ENSG00000197888" + - !!omap + - id: "ENSG00000197894" + - !!omap + - id: "ENSG00000197901" + - !!omap + - id: "ENSG00000197943" + - !!omap + - id: "ENSG00000197959" + - !!omap + - id: "ENSG00000197977" + - !!omap + - id: "ENSG00000198074" + - !!omap + - id: "ENSG00000198075" + - !!omap + - id: "ENSG00000198077" + - !!omap + - id: "ENSG00000198088" + - !!omap + - id: "ENSG00000198099" + - !!omap + - id: "ENSG00000198108" + - !!omap + - id: "ENSG00000198130" + - !!omap + - id: "ENSG00000198162" + - !!omap + - id: "ENSG00000198189" + - !!omap + - id: "ENSG00000198203" + - !!omap + - id: "ENSG00000198246" + - !!omap + - id: "ENSG00000198276" + - !!omap + - id: "ENSG00000198380" + - !!omap + - id: "ENSG00000198431" + - !!omap + - id: "ENSG00000198488" + - !!omap + - id: "ENSG00000198569" + - !!omap + - id: "ENSG00000198610" + - !!omap + - id: "ENSG00000198650" + - !!omap + - id: "ENSG00000198668" + - !!omap + - id: "ENSG00000198682" + - !!omap + - id: "ENSG00000198695" + - !!omap + - id: "ENSG00000198704" + - !!omap + - id: "ENSG00000198712" + - !!omap + - id: "ENSG00000198721" + - !!omap + - id: "ENSG00000198727" + - !!omap + - id: "ENSG00000198743" + - !!omap + - id: "ENSG00000198763" + - !!omap + - id: "ENSG00000198786" + - !!omap + - id: "ENSG00000198804" + - !!omap + - id: "ENSG00000198805" + - !!omap + - id: "ENSG00000198814" + - !!omap + - id: "ENSG00000198825" + - !!omap + - id: "ENSG00000198840" + - !!omap + - id: "ENSG00000198848" + - !!omap + - id: "ENSG00000198881" + - !!omap + - id: "ENSG00000198886" + - !!omap + - id: "ENSG00000198888" + - !!omap + - id: "ENSG00000198899" + - !!omap + - id: "ENSG00000198931" + - !!omap + - id: "ENSG00000198938" + - !!omap + - id: "ENSG00000198951" + - !!omap + - id: "ENSG00000198964" + - !!omap + - id: "ENSG00000203805" + - !!omap + - id: "ENSG00000203837" + - !!omap + - id: "ENSG00000203857" + - !!omap + - id: "ENSG00000203859" + - !!omap + - id: "ENSG00000203972" + - !!omap + - id: "ENSG00000204007" + - !!omap + - id: "ENSG00000204084" + - !!omap + - id: "ENSG00000204099" + - !!omap + - id: "ENSG00000204160" + - !!omap + - id: "ENSG00000204228" + - !!omap + - id: "ENSG00000204310" + - !!omap + - id: "ENSG00000204370" + - !!omap + - id: "ENSG00000204371" + - !!omap + - id: "ENSG00000204385" + - !!omap + - id: "ENSG00000204386" + - !!omap + - id: "ENSG00000204394" + - !!omap + - id: "ENSG00000205060" + - !!omap + - id: "ENSG00000205186" + - !!omap + - id: "ENSG00000205268" + - !!omap + - id: "ENSG00000205309" + - !!omap + - id: "ENSG00000205560" + - !!omap + - id: "ENSG00000205669" + - !!omap + - id: "ENSG00000205678" + - !!omap + - id: "ENSG00000205808" + - !!omap + - id: "ENSG00000205923" + - !!omap + - id: "ENSG00000206077" + - !!omap + - id: "ENSG00000206190" + - !!omap + - id: "ENSG00000206527" + - !!omap + - id: "ENSG00000211445" + - !!omap + - id: "ENSG00000211448" + - !!omap + - id: "ENSG00000211452" + - !!omap + - id: "ENSG00000211456" + - !!omap + - id: "ENSG00000212907" + - !!omap + - id: "ENSG00000213024" + - !!omap + - id: "ENSG00000213160" + - !!omap + - id: "ENSG00000213316" + - !!omap + - id: "ENSG00000213366" + - !!omap + - id: "ENSG00000213398" + - !!omap + - id: "ENSG00000213614" + - !!omap + - id: "ENSG00000213619" + - !!omap + - id: "ENSG00000213639" + - !!omap + - id: "ENSG00000213648" + - !!omap + - id: "ENSG00000213689" + - !!omap + - id: "ENSG00000213759" + - !!omap + - id: "ENSG00000213760" + - !!omap + - id: "ENSG00000213920" + - !!omap + - id: "ENSG00000213930" + - !!omap + - id: "ENSG00000214013" + - !!omap + - id: "ENSG00000214160" + - !!omap + - id: "ENSG00000214530" + - !!omap + - id: "ENSG00000215009" + - !!omap + - id: "ENSG00000215883" + - !!omap + - id: "ENSG00000218823" + - !!omap + - id: "ENSG00000221968" + - !!omap + - id: "ENSG00000221988" + - !!omap + - id: "ENSG00000223572" + - !!omap + - id: "ENSG00000223802" + - !!omap + - id: "ENSG00000224586" + - !!omap + - id: "ENSG00000225697" + - !!omap + - id: "ENSG00000226784" + - !!omap + - id: "ENSG00000227471" + - !!omap + - id: "ENSG00000228253" + - !!omap + - id: "ENSG00000228716" + - !!omap + - id: "ENSG00000228727" + - !!omap + - id: "ENSG00000229894" + - !!omap + - id: "ENSG00000229937" + - !!omap + - id: "ENSG00000231852" + - !!omap + - id: "ENSG00000233276" + - !!omap + - id: "ENSG00000235376" + - !!omap + - id: "ENSG00000235863" + - !!omap + - id: "ENSG00000237172" + - !!omap + - id: "ENSG00000237289" + - !!omap + - id: "ENSG00000237763" + - !!omap + - id: "ENSG00000238205" + - !!omap + - id: "ENSG00000239672" + - !!omap + - id: "ENSG00000239900" + - !!omap + - id: "ENSG00000240038" + - !!omap + - id: "ENSG00000240303" + - !!omap + - id: "ENSG00000240583" + - !!omap + - id: "ENSG00000240857" + - !!omap + - id: "ENSG00000240891" + - !!omap + - id: "ENSG00000241119" + - !!omap + - id: "ENSG00000241343" + - !!omap + - id: "ENSG00000241360" + - !!omap + - id: "ENSG00000241404" + - !!omap + - id: "ENSG00000241468" + - !!omap + - id: "ENSG00000241635" + - !!omap + - id: "ENSG00000241837" + - !!omap + - id: "ENSG00000241878" + - !!omap + - id: "ENSG00000241935" + - !!omap + - id: "ENSG00000241973" + - !!omap + - id: "ENSG00000242110" + - !!omap + - id: "ENSG00000242366" + - !!omap + - id: "ENSG00000242515" + - !!omap + - id: "ENSG00000242612" + - !!omap + - id: "ENSG00000243477" + - !!omap + - id: "ENSG00000243480" + - !!omap + - id: "ENSG00000243678" + - !!omap + - id: "ENSG00000243708" + - !!omap + - id: "ENSG00000243955" + - !!omap + - id: "ENSG00000243989" + - !!omap + - id: "ENSG00000244038" + - !!omap + - id: "ENSG00000244067" + - !!omap + - id: "ENSG00000244122" + - !!omap + - id: "ENSG00000244474" + - !!omap + - id: "ENSG00000244486" + - !!omap + - id: "ENSG00000248098" + - !!omap + - id: "ENSG00000248144" + - !!omap + - id: "ENSG00000249222" + - !!omap + - id: "ENSG00000249853" + - !!omap + - id: "ENSG00000249948" + - !!omap + - id: "ENSG00000250565" + - !!omap + - id: "ENSG00000250799" + - !!omap + - id: "ENSG00000251287" + - !!omap + - id: "ENSG00000253710" + - !!omap + - id: "ENSG00000254685" + - !!omap + - id: "ENSG00000255072" + - !!omap + - id: "ENSG00000255974" + - !!omap + - id: "ENSG00000256043" + - !!omap + - id: "ENSG00000256269" + - !!omap + - id: "ENSG00000256525" + - !!omap + - id: "ENSG00000257335" + - !!omap + - id: "ENSG00000257594" + - !!omap + - id: "ENSG00000259431" + - !!omap + - id: "ENSG00000261052" + - !!omap + - id: "ENSG00000265203" + - !!omap + - id: "ENSG00000266200" + - !!omap + - id: "ENSG00000267855" + - !!omap + - id: "ENSG00000268104" + - !!omap + - id: "ENSG00000272325" + - !!omap + - id: "ENSG00000272333" + - !!omap + - id: "ENSG00000273841" + - !!omap + - id: "ENSG00000274252" + - !!omap + - id: "ENSG00000274588" + - !!omap + - id: "ENSG00000276293" + - !!omap + - id: "ENSG00000276747" + - !!omap + - id: "ENSG00000277161" + - !!omap + - id: "ENSG00000277494" + - !!omap + - id: "ENSG00000277893" + - !!omap + - id: "ENSG00000278540" + - !!omap + - id: "ENSG00000281500" + - !!omap + - id: "ENSG00000288702" + - !!omap + - id: "ENSG00000288705" +- compartments: !!omap + - e: "Extracellular" + - x: "Peroxisome" + - m: "Mitochondria" + - c: "Cytosol" + - l: "Lysosome" + - r: "Endoplasmic reticulum" + - g: "Golgi apparatus" + - n: "Nucleus" + - i: "Inner mitochondria" diff --git a/tutorials/light_ecModel/models/ecModel.yml b/tutorials/light_ecModel/models/ecModel.yml index 8756fdddd..143b9917c 100644 --- a/tutorials/light_ecModel/models/ecModel.yml +++ b/tutorials/light_ecModel/models/ecModel.yml @@ -4,7 +4,7 @@ id: "Human-GEM" name: "Human-GEM" version: "1.15.0" - date: "2023-06-25" + date: "2023-06-27" defaultLB: "-1000" defaultUB: "1000" taxonomy: "9606" @@ -270090,9 +270090,6 @@ - !!omap - id: "ENSG00000288705" - name: "UGT1A5" - - !!omap - - id: "standard" - - name: "std" - compartments: !!omap - e: "Extracellular" - x: "Peroxisome" diff --git a/tutorials/light_ecModel/protocol.m b/tutorials/light_ecModel/protocol.m index 27264c42f..038c61857 100644 --- a/tutorials/light_ecModel/protocol.m +++ b/tutorials/light_ecModel/protocol.m @@ -15,7 +15,7 @@ % Prepare software and model adapter GECKOInstaller.install -checkInstallation +checkInstallation; setRavenSolver('gurobi') % STEP 1 @@ -147,3 +147,10 @@ [mappedFlux, enzUsageFlux, usageEnz] = mapRxnsToConv(ecModel, model, sol.x); % STEP 29 +% To exemplify the construction of a context-specific ecModel, a +% conventional GEM of HT-29 cell line is loaded +HT29 = readYAMLmodel(fullfile(adapter.params.path,'models','HT29-GEM.yml')); + +% Make a context-specific ecModel based on the generic Human-GEM +ecModel = loadEcModel(); +ecHT29 = getSubsetEcModel(ecModel,HT29); \ No newline at end of file From 3e1780a3c63d1ecda5497ac29234794a7506236b Mon Sep 17 00:00:00 2001 From: edkerk Date: Fri, 30 Jun 2023 12:17:04 +0200 Subject: [PATCH 8/9] Revert "fix: getStandardKcat no standard gene in light-ec" This reverts commit d9b7cd5fcaaf45839f64363a129718a5b681fe98. --- .../gather_kcats/getStandardKcat.html | 265 +++++++++--------- src/geckomat/gather_kcats/getStandardKcat.m | 13 +- 2 files changed, 140 insertions(+), 138 deletions(-) diff --git a/doc/src/geckomat/gather_kcats/getStandardKcat.html b/doc/src/geckomat/gather_kcats/getStandardKcat.html index 5eea311c9..6cbfd1679 100644 --- a/doc/src/geckomat/gather_kcats/getStandardKcat.html +++ b/doc/src/geckomat/gather_kcats/getStandardKcat.html @@ -247,139 +247,140 @@

    SOURCE CODE ^% Only add if not geckoLight & getStandardKcat was not run earlier 0152 if ~any(strcmp(model.mets,'prot_standard')) -0153 if ~model.ec.geckoLight -0154 % Add a new gene to be consistent with ec field named standard -0155 proteinStdGenes.genes = 'standard'; -0156 if isfield(model,'geneShortNames') -0157 proteinStdGenes.geneShortNames = 'std'; -0158 end -0159 model = addGenesRaven(model, proteinStdGenes); -0160 % Add a new metabolite named prot_standard -0161 proteinStdMets.mets = 'prot_standard'; -0162 proteinStdMets.metNames = proteinStdMets.mets; -0163 proteinStdMets.compartments = 'c'; -0164 if isfield(model,'metNotes') -0165 proteinStdMets.metNotes = 'Standard enzyme-usage pseudometabolite'; -0166 end -0167 model = addMets(model, proteinStdMets); -0168 -0169 % Add a protein usage reaction if not a light version -0170 proteinStdUsageRxn.rxns = {'usage_prot_standard'}; -0171 proteinStdUsageRxn.rxnNames = proteinStdUsageRxn.rxns; -0172 proteinStdUsageRxn.mets = {proteinStdMets.mets, 'prot_pool'}; -0173 proteinStdUsageRxn.stoichCoeffs = [-1, 1]; -0174 proteinStdUsageRxn.lb = -1000; -0175 proteinStdUsageRxn.ub = 0; -0176 proteinStdUsageRxn.grRules = proteinStdGenes.genes; -0177 -0178 model = addRxns(model, proteinStdUsageRxn); -0179 end -0180 % Update .ec structure in model -0181 model.ec.genes(end+1) = {'standard'}; -0182 model.ec.enzymes(end+1) = {'standard'}; -0183 model.ec.mw(end+1) = standardMW; -0184 model.ec.sequence(end+1) = {''}; -0185 % Additional info -0186 if isfield(model.ec,'concs') -0187 model.ec.concs(end+1) = nan(); -0188 end -0189 -0190 % Expand the enzyme rxns matrix -0191 model.ec.rxnEnzMat = [model.ec.rxnEnzMat, zeros(length(model.ec.rxns), 1)]; % 1 new enzyme -0192 model.ec.rxnEnzMat = [model.ec.rxnEnzMat; zeros(length(rxnsMissingGPR), length(model.ec.enzymes))]; % new rxns -0193 end -0194 numRxns = length(model.ec.rxns); -0195 stdMetIdx = find(strcmpi(model.ec.enzymes, 'standard')); -0196 -0197 % Remove previous standard kcat assignment -0198 oldStandardEnz = find(strcmp(model.ec.source,'standard')); -0199 if ~isempty(oldStandardEnz) -0200 model.ec.rxns(oldStandardEnz) = []; -0201 model.ec.kcat(oldStandardEnz) = []; -0202 model.ec.source(oldStandardEnz) = []; -0203 model.ec.notes(oldStandardEnz) = []; -0204 model.ec.eccodes(oldStandardEnz) = []; -0205 model.ec.rxnEnzMat(oldStandardEnz,:) = []; -0206 end -0207 -0208 for i = 1:numel(rxnsMissingGPR) -0209 rxnIdx = rxnsMissingGPR(i); -0210 -0211 % Update .ec structure in model -0212 if ~model.ec.geckoLight -0213 model.ec.rxns(end+1) = model.rxns(rxnIdx); -0214 % Add prefix in case is light version -0215 else -0216 model.ec.rxns{end+1} = ['001_' model.rxns{rxnIdx}]; -0217 end -0218 -0219 if ~standard -0220 kcatSubSystemIdx = strcmpi(enzSubSystem_names, model.subSystems{rxnIdx}(1)); -0221 if all(kcatSubSystemIdx) -0222 model.ec.kcat(end+1) = kcatSubSystem(kcatSubSystemIdx); -0223 else -0224 model.ec.kcat(end+1) = standardKcat; -0225 end -0226 else -0227 model.ec.kcat(end+1) = standardKcat; -0228 end -0229 -0230 model.ec.source(end+1) = {'standard'}; -0231 model.ec.notes(end+1) = {''}; -0232 model.ec.eccodes(end+1) = {''}; -0233 -0234 % Update the enzyme rxns matrix -0235 model.ec.rxnEnzMat(numRxns+i, stdMetIdx) = 1; -0236 end -0237 % Get the rxns identifiers of the updated rxns -0238 rxnsMissingGPR = model.rxns(rxnsMissingGPR); -0239 -0240 if fillZeroKcat -0241 zeroKcat = model.ec.kcat == 0 | isnan(model.ec.kcat); -0242 model.ec.kcat(zeroKcat) = standardKcat; -0243 model.ec.source(zeroKcat) = {'standard'}; -0244 rxnsNoKcat = model.ec.rxns(zeroKcat); -0245 else -0246 rxnsNoKcat = []; -0247 end +0153 % Add a new gene to be consistent with ec field named standard +0154 proteinStdGenes.genes = 'standard'; +0155 if isfield(model,'geneShortNames') +0156 proteinStdGenes.geneShortNames = 'std'; +0157 end +0158 model = addGenesRaven(model, proteinStdGenes); +0159 +0160 if ~model.ec.geckoLight +0161 % Add a new metabolite named prot_standard +0162 proteinStdMets.mets = 'prot_standard'; +0163 proteinStdMets.metNames = proteinStdMets.mets; +0164 proteinStdMets.compartments = 'c'; +0165 if isfield(model,'metNotes') +0166 proteinStdMets.metNotes = 'Standard enzyme-usage pseudometabolite'; +0167 end +0168 model = addMets(model, proteinStdMets); +0169 +0170 % Add a protein usage reaction if not a light version +0171 proteinStdUsageRxn.rxns = {'usage_prot_standard'}; +0172 proteinStdUsageRxn.rxnNames = proteinStdUsageRxn.rxns; +0173 proteinStdUsageRxn.mets = {proteinStdMets.mets, 'prot_pool'}; +0174 proteinStdUsageRxn.stoichCoeffs = [-1, 1]; +0175 proteinStdUsageRxn.lb = -1000; +0176 proteinStdUsageRxn.ub = 0; +0177 proteinStdUsageRxn.grRules = proteinStdGenes.genes; +0178 +0179 model = addRxns(model, proteinStdUsageRxn); +0180 end +0181 % Update .ec structure in model +0182 model.ec.genes(end+1) = {'standard'}; +0183 model.ec.enzymes(end+1) = {'standard'}; +0184 model.ec.mw(end+1) = standardMW; +0185 model.ec.sequence(end+1) = {''}; +0186 % Additional info +0187 if isfield(model.ec,'concs') +0188 model.ec.concs(end+1) = nan(); +0189 end +0190 +0191 % Expand the enzyme rxns matrix +0192 model.ec.rxnEnzMat = [model.ec.rxnEnzMat, zeros(length(model.ec.rxns), 1)]; % 1 new enzyme +0193 model.ec.rxnEnzMat = [model.ec.rxnEnzMat; zeros(length(rxnsMissingGPR), length(model.ec.enzymes))]; % new rxns +0194 end +0195 numRxns = length(model.ec.rxns); +0196 stdMetIdx = find(strcmpi(model.ec.enzymes, 'standard')); +0197 +0198 % Remove previous standard kcat assignment +0199 oldStandardEnz = find(strcmp(model.ec.source,'standard')); +0200 if ~isempty(oldStandardEnz) +0201 model.ec.rxns(oldStandardEnz) = []; +0202 model.ec.kcat(oldStandardEnz) = []; +0203 model.ec.source(oldStandardEnz) = []; +0204 model.ec.notes(oldStandardEnz) = []; +0205 model.ec.eccodes(oldStandardEnz) = []; +0206 model.ec.rxnEnzMat(oldStandardEnz,:) = []; +0207 end +0208 +0209 for i = 1:numel(rxnsMissingGPR) +0210 rxnIdx = rxnsMissingGPR(i); +0211 +0212 % Update .ec structure in model +0213 if ~model.ec.geckoLight +0214 model.ec.rxns(end+1) = model.rxns(rxnIdx); +0215 % Add prefix in case is light version +0216 else +0217 model.ec.rxns{end+1} = ['001_' model.rxns{rxnIdx}]; +0218 end +0219 +0220 if ~standard +0221 kcatSubSystemIdx = strcmpi(enzSubSystem_names, model.subSystems{rxnIdx}(1)); +0222 if all(kcatSubSystemIdx) +0223 model.ec.kcat(end+1) = kcatSubSystem(kcatSubSystemIdx); +0224 else +0225 model.ec.kcat(end+1) = standardKcat; +0226 end +0227 else +0228 model.ec.kcat(end+1) = standardKcat; +0229 end +0230 +0231 model.ec.source(end+1) = {'standard'}; +0232 model.ec.notes(end+1) = {''}; +0233 model.ec.eccodes(end+1) = {''}; +0234 +0235 % Update the enzyme rxns matrix +0236 model.ec.rxnEnzMat(numRxns+i, stdMetIdx) = 1; +0237 end +0238 % Get the rxns identifiers of the updated rxns +0239 rxnsMissingGPR = model.rxns(rxnsMissingGPR); +0240 +0241 if fillZeroKcat +0242 zeroKcat = model.ec.kcat == 0 | isnan(model.ec.kcat); +0243 model.ec.kcat(zeroKcat) = standardKcat; +0244 model.ec.source(zeroKcat) = {'standard'}; +0245 rxnsNoKcat = model.ec.rxns(zeroKcat); +0246 else +0247 rxnsNoKcat = []; 0248 end -0249 -0250 function Cflat = flattenCell(C,strFlag) -0251 %FLATTENCELL Flatten a nested column cell array into a matrix cell array. -0252 % -0253 % CFLAT = FLATTENCELL(C) takes a column cell array in which one or more -0254 % entries is a nested cell array, and flattens it into a 2D matrix cell -0255 % array, where the nested entries are spread across new columns. -0256 % -0257 % CFLAT = FLATTENCELL(C,STRFLAG) if STRFLAG is TRUE, empty entries in the -0258 % resulting CFLAT will be replaced with empty strings {''}. Default = FALSE -0259 if nargin < 2 -0260 strFlag = false; -0261 end -0262 -0263 % determine which entries are cells -0264 cells = cellfun(@iscell,C); -0265 -0266 % determine number of elements in each nested cell -0267 cellsizes = cellfun(@numel,C); -0268 cellsizes(~cells) = 1; % ignore non-cell entries -0269 -0270 % flatten single-entry cells -0271 Cflat = C; -0272 Cflat(cells & (cellsizes == 1)) = cellfun(@(x) x{1},Cflat(cells & (cellsizes == 1)),'UniformOutput',false); -0273 -0274 % iterate through multi-entry cells -0275 multiCells = find(cellsizes > 1); -0276 for i = 1:length(multiCells) -0277 cellContents = Cflat{multiCells(i)}; -0278 Cflat(multiCells(i),1:length(cellContents)) = cellContents; -0279 end -0280 -0281 % change empty elements to strings, if specified -0282 if ( strFlag ) -0283 Cflat(cellfun(@isempty,Cflat)) = {''}; -0284 end -0285 end

    +0249 end +0250 +0251 function Cflat = flattenCell(C,strFlag) +0252 %FLATTENCELL Flatten a nested column cell array into a matrix cell array. +0253 % +0254 % CFLAT = FLATTENCELL(C) takes a column cell array in which one or more +0255 % entries is a nested cell array, and flattens it into a 2D matrix cell +0256 % array, where the nested entries are spread across new columns. +0257 % +0258 % CFLAT = FLATTENCELL(C,STRFLAG) if STRFLAG is TRUE, empty entries in the +0259 % resulting CFLAT will be replaced with empty strings {''}. Default = FALSE +0260 if nargin < 2 +0261 strFlag = false; +0262 end +0263 +0264 % determine which entries are cells +0265 cells = cellfun(@iscell,C); +0266 +0267 % determine number of elements in each nested cell +0268 cellsizes = cellfun(@numel,C); +0269 cellsizes(~cells) = 1; % ignore non-cell entries +0270 +0271 % flatten single-entry cells +0272 Cflat = C; +0273 Cflat(cells & (cellsizes == 1)) = cellfun(@(x) x{1},Cflat(cells & (cellsizes == 1)),'UniformOutput',false); +0274 +0275 % iterate through multi-entry cells +0276 multiCells = find(cellsizes > 1); +0277 for i = 1:length(multiCells) +0278 cellContents = Cflat{multiCells(i)}; +0279 Cflat(multiCells(i),1:length(cellContents)) = cellContents; +0280 end +0281 +0282 % change empty elements to strings, if specified +0283 if ( strFlag ) +0284 Cflat(cellfun(@isempty,Cflat)) = {''}; +0285 end +0286 end
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    \ No newline at end of file diff --git a/src/geckomat/gather_kcats/getStandardKcat.m b/src/geckomat/gather_kcats/getStandardKcat.m index e08eae811..f5b5061c1 100644 --- a/src/geckomat/gather_kcats/getStandardKcat.m +++ b/src/geckomat/gather_kcats/getStandardKcat.m @@ -150,13 +150,14 @@ % Only add if not geckoLight & getStandardKcat was not run earlier if ~any(strcmp(model.mets,'prot_standard')) + % Add a new gene to be consistent with ec field named standard + proteinStdGenes.genes = 'standard'; + if isfield(model,'geneShortNames') + proteinStdGenes.geneShortNames = 'std'; + end + model = addGenesRaven(model, proteinStdGenes); + if ~model.ec.geckoLight - % Add a new gene to be consistent with ec field named standard - proteinStdGenes.genes = 'standard'; - if isfield(model,'geneShortNames') - proteinStdGenes.geneShortNames = 'std'; - end - model = addGenesRaven(model, proteinStdGenes); % Add a new metabolite named prot_standard proteinStdMets.mets = 'prot_standard'; proteinStdMets.metNames = proteinStdMets.mets; From 543385460a1943a1ee6582799724b6d0c7f627a1 Mon Sep 17 00:00:00 2001 From: edkerk Date: Fri, 30 Jun 2023 12:23:20 +0200 Subject: [PATCH 9/9] fix: comment out writeDLKcatInput in protocol.m --- tutorials/full_ecModel/protocol.m | 13 +++++++++---- tutorials/light_ecModel/protocol.m | 8 +++++++- 2 files changed, 16 insertions(+), 5 deletions(-) diff --git a/tutorials/full_ecModel/protocol.m b/tutorials/full_ecModel/protocol.m index 2bd3fc98a..0a84cc62c 100644 --- a/tutorials/full_ecModel/protocol.m +++ b/tutorials/full_ecModel/protocol.m @@ -131,10 +131,15 @@ [ecModel, noSmiles] = findMetSmiles(ecModel); % DLKcat runs in Python. An input file is written, which is then used by -% DLKcat, while the output file is read back into MATLAB. -writeDLKcatInput(ecModel); - -% runDLKcat will run the DLKcat algorithm via a Docker image +% DLKcat, while the output file is read back into MATLAB. The full_ecModel +% tutorial already comes with a DLKcat.tsv file populated with kcat values. +% If this file should be regenerated, the line below should be uncommented. +% Note that this overwrites the existing files, thereby discarding existing +% kcat predictions. +%writeDLKcatInput(ecModel,[],[],[],[],true); + +% runDLKcat will run the DLKcat algorithm via a Docker image. If the +% DLKcat.tsv file already has kcat values, these will all be overwritten. runDLKcat(); kcatList_DLKcat = readDLKcatOutput(ecModel); diff --git a/tutorials/light_ecModel/protocol.m b/tutorials/light_ecModel/protocol.m index 038c61857..356cd847a 100644 --- a/tutorials/light_ecModel/protocol.m +++ b/tutorials/light_ecModel/protocol.m @@ -62,7 +62,13 @@ % attached to reaction identifiers; while in light models such reactions % are not split and a counting prefix (e.g. 001_) is attached to reaction % identifiers. -writeDLKcatInput(ecModel); + +% The light_ecModel tutorial already comes with a DLKcat.tsv file populated +% with kcat values. If this file should be regenerated, the line below +% should be uncommented. Note that this overwrites the existing files, +% thereby discarding existing kcat predictions. +%writeDLKcatInput(ecModel,[],[],[],[],true); + runDLKcat(); kcatList_DLKcat = readDLKcatOutput(ecModel);