Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Need Alternate Target Sequence Length Data Flow #19

Open
connercopeland opened this issue Dec 1, 2023 · 0 comments
Open

Need Alternate Target Sequence Length Data Flow #19

connercopeland opened this issue Dec 1, 2023 · 0 comments

Comments

@connercopeland
Copy link
Collaborator

VIBES output visuals get target genome length (assumed bacterial genome) from parsed prophage-searched-against-bacterial-genome nhmmscan output. However, if the target genome contains no hits to the query prophages, the target genome length information isn't available for the visualization generator script.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@connercopeland