From a9e8a019a2d4909baecb2450ebc9b45189b2bc47 Mon Sep 17 00:00:00 2001
From: GitHub Actions <actions@github.com>
Date: Wed, 4 Dec 2024 15:35:05 +0000
Subject: [PATCH] markdown source builds

Auto-generated via `{sandpaper}`
Source  : ad785c46666ffb96033567107d228ab2c28aed8a
Branch  : main
Author  : Milan Malfait <38256462+milanmlft@users.noreply.github.com>
Time    : 2024-12-04 15:33:12 +0000
Message : Update 8 packages (#53)

Co-authored-by: milanmlft <milanmlft@users.noreply.github.com>
---
 01-rstudio-intro.md                           |    2 +-
 02-project-intro.md                           |    2 +-
 03-seeking-help.md                            |    2 +-
 config.yaml                                   |   93 -
 fig/statistics-rendered-unnamed-chunk-3-1.png |  Bin 4382 -> 4348 bytes
 fig/statistics-rendered-unnamed-chunk-3-2.png |  Bin 4452 -> 4280 bytes
 md5sum.txt                                    |   46 +-
 renv.lock                                     | 1612 -----------------
 8 files changed, 26 insertions(+), 1731 deletions(-)
 delete mode 100644 config.yaml
 delete mode 100644 renv.lock

diff --git a/01-rstudio-intro.md b/01-rstudio-intro.md
index 8100f667f..6f5564211 100644
--- a/01-rstudio-intro.md
+++ b/01-rstudio-intro.md
@@ -643,7 +643,7 @@ function (name, pos = -1L, envir = as.environment(pos), all.names = FALSE,
     }
     else all.names
 }
-<bytecode: 0x5599d95d9d60>
+<bytecode: 0x5614be79ee20>
 <environment: namespace:base>
 ```
 
diff --git a/02-project-intro.md b/02-project-intro.md
index be4378d61..1b4c2b06b 100644
--- a/02-project-intro.md
+++ b/02-project-intro.md
@@ -190,7 +190,7 @@ ls -lh data/gapminder_data.csv
 ```
 
 ``` output
--rw-r--r-- 1 runner docker 80K Nov 19 00:35 data/gapminder_data.csv
+-rw-r--r-- 1 runner docker 80K Dec  4 15:34 data/gapminder_data.csv
 ```
 
 The file size is 80K.
diff --git a/03-seeking-help.md b/03-seeking-help.md
index 3b2bbb168..e79e3c5db 100644
--- a/03-seeking-help.md
+++ b/03-seeking-help.md
@@ -181,7 +181,7 @@ attached base packages:
 [1] stats     graphics  grDevices utils     datasets  methods   base     
 
 loaded via a namespace (and not attached):
-[1] compiler_4.4.2 tools_4.4.2    yaml_2.3.10    knitr_1.48     xfun_0.49     
+[1] compiler_4.4.2 tools_4.4.2    yaml_2.3.10    knitr_1.49     xfun_0.49     
 [6] renv_1.0.11    evaluate_1.0.1
 ```
 
diff --git a/config.yaml b/config.yaml
deleted file mode 100644
index 24322c0c3..000000000
--- a/config.yaml
+++ /dev/null
@@ -1,93 +0,0 @@
-#------------------------------------------------------------
-# Values for this lesson.
-#------------------------------------------------------------
-
-# Which carpentry is this (swc, dc, lc, or cp)?
-# swc: Software Carpentry
-# dc: Data Carpentry
-# lc: Library Carpentry
-# cp: Carpentries (to use for instructor training for instance)
-# incubator: The Carpentries Incubator
-carpentry: 'swc'
-
-# Overall title for pages.
-title: 'UCL ClinicianCoders - R for Reproducible Scientific Analysis'
-
-# Date the lesson was created (YYYY-MM-DD, this is empty by default)
-created: '2023-10-26'
-
-# Comma-separated list of keywords for the lesson
-keywords: 'software, data, lesson, The Carpentries'
-
-# Life cycle stage of the lesson
-# possible values: pre-alpha, alpha, beta, stable
-life_cycle: 'stable'
-
-# License of the lesson materials (recommended CC-BY 4.0)
-license: 'CC-BY 4.0'
-
-# Link to the source repository for this lesson
-source: 'https://github.com/UCL/ClinicianCoders'
-
-# Default branch of your lesson
-branch: 'main'
-
-# Who to contact if there are any issues
-contact: 'arc-teaching@ucl.ac.uk'
-
-# Navigation ------------------------------------------------
-#
-# Use the following menu items to specify the order of
-# individual pages in each dropdown section. Leave blank to
-# include all pages in the folder.
-#
-# Example -------------
-#
-# episodes:
-# - introduction.md
-# - first-steps.md
-#
-# learners:
-# - setup.md
-#
-# instructors:
-# - instructor-notes.md
-#
-# profiles:
-# - one-learner.md
-# - another-learner.md
-
-# Order of episodes in your lesson
-episodes:
-- 01-rstudio-intro.Rmd
-- 02-project-intro.Rmd
-- 03-seeking-help.Rmd
-- 04-data-structures-part1.Rmd
-- 05-data-structures-part2.Rmd
-- 06-data-subsetting.Rmd
-- 08-plot-ggplot2.Rmd
-- 11-writing-data.Rmd
-- 12-dplyr.Rmd
-- 13-tidyr.Rmd
-- statistics.Rmd
-- 14-knitr-markdown.Rmd
-- 15-wrap-up.Rmd
-
-# Information for Learners
-learners:
-
-# Information for Instructors
-instructors:
-
-# Learner Profiles
-profiles:
-
-# Customisation ---------------------------------------------
-#
-# This space below is where custom yaml items (e.g. pinning
-# sandpaper and varnish versions) should live
-
-
-url: 'https://UCL.github.io/ClinicianCoders'
-analytics: carpentries
-lang: en
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diff --git a/md5sum.txt b/md5sum.txt
index f2e39d6b8..642ed8ceb 100644
--- a/md5sum.txt
+++ b/md5sum.txt
@@ -1,24 +1,24 @@
 "file" "checksum" "built" "date"
-"CODE_OF_CONDUCT.md" "c93c83c630db2fe2462240bf72552548" "site/built/CODE_OF_CONDUCT.md" "2024-11-19"
-"LICENSE.md" "b24ebbb41b14ca25cf6b8216dda83e5f" "site/built/LICENSE.md" "2024-11-19"
-"config.yaml" "267b19cf075e520edbf879e5567e8d1d" "site/built/config.yaml" "2024-11-19"
-"index.md" "86c8fb559b13d1695d55b52dd6cbf574" "site/built/index.md" "2024-11-19"
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