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Export analysis to code to guarantee reproducibility #202

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VPetukhov opened this issue Jan 29, 2019 · 2 comments
Open

Export analysis to code to guarantee reproducibility #202

VPetukhov opened this issue Jan 29, 2019 · 2 comments

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@VPetukhov
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Hello,
Thank you for the great package! It's really nice to give non-computational people ability to analyse RNA-seq data.

Though, is there any way to save analysis for future repeating? Any hand-made GUI analysis suffers from lack of reproducibility, and it looks like in your case, this problem can be fixed. Ideally, would be nice to have possibility to export R code, producing result. Or, at least, to save analysis parameters somewhere...

@nephantes
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We had this capability before but had to remove to support more complex data manipulations. If shiny improves saving whole session state, we will bring this capability back.

@VPetukhov
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Thanks for the quick answer! Got your point.

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