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Procedure to update time series data from CMG
Ellyn Montgomery edited this page Jul 6, 2015
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- Log into geoport and use wget (SCP would also work) to copy files from stellwagen. For example, to add a new experiment Fire Island 14 do the wget below. If the data is already there, don't repeat the wget!
cd /usgs/data2/emontgomery/stellwagen/Data
wget --continue -A .nc -r -nd -nc --no-parent http://stellwagen.er.usgs.gov/FIREISLAND14.html
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update the CSV file metadata with the git-hub GUI, adding the new experiment info. Choose the SECOND option that says to issue a pull request, then save
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check that your local conversion script is up to date. Note at this point guidance is NOT to fork the code into individual work areas, just pull.
git pull
- make sure you are in the Anaconda python ioos environment
export PATH="/home/usgs/miniconda/bin:$PATH"
source activate ioos
((ioos) should be prepended to the prompt string if it's set)
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before starting, you need .nc files in stellwagen/DATA
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run collect.py to do the conversion- more info is [here](https://github.com/USGS-CMG/usgs-cmg-portal/wiki/collect.py usage)