setup.py

from setuptools import setup

with open("README.md", "r") as fh:
    long_description = fh.read()

exec(open('cnvpytor/version.py').read())

setup(
    name='CNVpytor',
    version=__version__,
    author='Milovan Suvakov, Abyzov Lab, Mayo Clinic',
    author_email='suvakov@gmail.com',
    packages=['cnvpytor'],
    package_dir={'cnvpytor': 'cnvpytor'},
    package_data={'cnvpytor': ['imgs/*.png','data/*']},
    description='Python extension of CNVnator',
    long_description=long_description,
    long_description_content_type='text/markdown',
    url='https://github.com/abyzovlab/CNVpytor',
    install_requires=[
        'gnureadline',
        'requests>=2.0',
        'pysam>=0.15',
        'numpy>=1.16',
        'scipy>=1.1',
        'matplotlib>=2.2',
        'h5py>=2.9',
        'xlsxwriter>=1.3',
    ],
    extras_require={
        ':python_version < "3.4"': [
            'pathlib>=1.0',
        ],
    },
    classifiers=[
        'Development Status :: 3 - Alpha',
        'Programming Language :: Python :: 2',
        'Programming Language :: Python :: 2.7',
        'Programming Language :: Python :: 3',
        'Programming Language :: Python :: 3.5',
        'Programming Language :: Python :: 3.6',
        'Programming Language :: Python :: 3.7',
        'License :: OSI Approved :: MIT License',
        'Operating System :: OS Independent'
    ],
    entry_points={
        'console_scripts': [
            'cnvpytor = cnvpytor.__main__:main'
        ]
    })