From d6777a973c3eb5f327441dcf996cab88d432d367 Mon Sep 17 00:00:00 2001
From: Alexander Watzinger <alexander.watzinger@craws.net>
Date: Fri, 10 Jan 2025 12:34:09 +0100
Subject: [PATCH] Bones: SQL for skull and teeth types

---
 install/upgrade/bones.sql | 227 ++++++++++++++++++++++++--------------
 1 file changed, 147 insertions(+), 80 deletions(-)

diff --git a/install/upgrade/bones.sql b/install/upgrade/bones.sql
index ee18a8c5b..cf6a67092 100644
--- a/install/upgrade/bones.sql
+++ b/install/upgrade/bones.sql
@@ -3,94 +3,161 @@ BEGIN;
 -- Feature bone inventory (#1473)
 INSERT INTO model.entity (cidoc_class_code, openatlas_class_name, name) VALUES
     ('E55', 'type_tools', 'Bone inventory'),
-    ('E55', 'type_tools', 'Inventory: Skull'),
-    ('E55', 'type_tools', 'Inventory: Teeth'),
-    ('E55', 'type_tools', 'Inventory: Shoulder girdle'),
-    ('E55', 'type_tools', 'Inventory: Arms and hands'),
-    ('E55', 'type_tools', 'Inventory: Axial skeleton'),
-    ('E55', 'type_tools', 'Inventory: Pelvis'),
-    ('E55', 'type_tools', 'Inventory: Legs and feet');
+    ('E55', 'type_tools', 'Skull'),
+    ('E55', 'type_tools', 'Teeth'),
+    ('E55', 'type_tools', 'Shoulder girdle'),
+    ('E55', 'type_tools', 'Arms and hands'),
+    ('E55', 'type_tools', 'Axial skeleton'),
+    ('E55', 'type_tools', 'Pelvis'),
+    ('E55', 'type_tools', 'Legs and feet');
 
 INSERT INTO web.type_none_selectable (entity_id) VALES
     (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Bone inventory'),
-    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Inventory: Skull'),
-    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Inventory: Teeth'),
-    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Inventory: Shoulder girdle'),
-    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Inventory: Arms and hands'),
-    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Inventory: Axial skeleton'),
-    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Inventory: Pelvis'),
-    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Inventory: Legs and feet');
+    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Skull'),
+    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Teeth'),
+    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Shoulder girdle'),
+    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Arms and hands'),
+    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Axial skeleton'),
+    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Pelvis'),
+    (SELECT id FROM model.entiy WHERE openatlas_class_name = 'type_tools' AND name = 'Legs and feet');
 
 INSERT INTO model.link (property_code, domain_id, range_id) VALUES
-    ('P127', (SELECT id FROM model.entity WHERE name='Inventory: Skull'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
-    ('P127', (SELECT id FROM model.entity WHERE name='Inventory: Teeth'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
-    ('P127', (SELECT id FROM model.entity WHERE name='Inventory: Shoulder girdle'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
-    ('P127', (SELECT id FROM model.entity WHERE name='Inventory: Arms and hands'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
-    ('P127', (SELECT id FROM model.entity WHERE name='Inventory: Axial skeleton'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
-    ('P127', (SELECT id FROM model.entity WHERE name='Inventory: Pelvis'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
-    ('P127', (SELECT id FROM model.entity WHERE name='Inventory: Legs and feet'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
+    ('P127', (SELECT id FROM model.entity WHERE name='Skull'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
+    ('P127', (SELECT id FROM model.entity WHERE name='Teeth'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
+    ('P127', (SELECT id FROM model.entity WHERE name='Shoulder girdle'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
+    ('P127', (SELECT id FROM model.entity WHERE name='Arms and hands'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
+    ('P127', (SELECT id FROM model.entity WHERE name='Axial skeleton'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
+    ('P127', (SELECT id FROM model.entity WHERE name='Pelvis'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
+    ('P127', (SELECT id FROM model.entity WHERE name='Legs and feet'), (SELECT id FROM model.entity WHERE name='Bone inventory')),
 
 -- Skull
 INSERT INTO model.entity (cidoc_class_code, openatlas_class_name, name, description) VALUES
-    ('E55', 'type_tools', ''),
+    ('E55', 'type_tools', 'Frontal'),
+        ('E55', 'type_tools', 'Orbit R'),
+        ('E55', 'type_tools', 'Orbit L'),
+    ('E55', 'type_tools', 'Parietal R'),
+    ('E55', 'type_tools', 'Parietal L'),
+    ('E55', 'type_tools', 'Temporal R'),
+        ('E55', 'type_tools', 'Squama R'),
+        ('E55', 'type_tools', 'Petrous R'),
+        ('E55', 'type_tools', 'Mastoid R'),
+    ('E55', 'type_tools', 'Temporal L'),
+        ('E55', 'type_tools', 'Squama L'),
+        ('E55', 'type_tools', 'Petrous L'),
+        ('E55', 'type_tools', 'Mastoid L'),
+    ('E55', 'type_tools', 'Occipital'),
+        ('E55', 'type_tools', 'Pars squama'),
+        ('E55', 'type_tools', 'Pars lateralis R'),
+        ('E55', 'type_tools', 'Pars lateralis L'),
+        ('E55', 'type_tools', 'Pars basilaris R'),
+        ('E55', 'type_tools', 'Pars basilaris L'),
+    ('E55', 'type_tools', 'Sphenoid'),
+        ('E55', 'type_tools', 'Ala major R'),
+        ('E55', 'type_tools', 'Ala minor R'),
+        ('E55', 'type_tools', 'Ala major L'),
+        ('E55', 'type_tools', 'Ala minor L'),
+        ('E55', 'type_tools', 'Sphenoid body'),
+    ('E55', 'type_tools', 'Maxilla R'),
+    ('E55', 'type_tools', 'Maxilla L'),
+    ('E55', 'type_tools', 'Nasal R'),
+    ('E55', 'type_tools', 'Nasal L'),
+    ('E55', 'type_tools', 'Lacrimale R'),
+    ('E55', 'type_tools', 'Lacrimale L'),
+    ('E55', 'type_tools', 'Ethmoid'),
+    ('E55', 'type_tools', 'Zygomatic R'),
+    ('E55', 'type_tools', 'Zygomatic L'),
+    ('E55', 'type_tools', 'Vomer'),
+    ('E55', 'type_tools', 'Palate R'),
+    ('E55', 'type_tools', 'Palate L'),
+    ('E55', 'type_tools', 'Inferior conchae R'),
+    ('E55', 'type_tools', 'Inferior conchae L'),
+    ('E55', 'type_tools', 'Mandible R'),
+        ('E55', 'type_tools', 'Ramus R'),
+        ('E55', 'type_tools', 'ondyle R'),
+    ('E55', 'type_tools', 'Mandible L'),
+        ('E55', 'type_tools', 'Ramus L'),
+        ('E55', 'type_tools', 'ondyle L'),
+    ('E55', 'type_tools', 'Auditory ossicles'),
+        ('E55', 'type_tools', 'Stapes R'),
+        ('E55', 'type_tools', 'Incus R'),
+        ('E55', 'type_tools', 'Malleus R'),
+        ('E55', 'type_tools', 'Stapes L'),
+        ('E55', 'type_tools', 'Incus L'),
+        ('E55', 'type_tools', 'Malleus L'),
+    ('E55', 'type_tools', 'Cricoid cartilage'),
+    ('E55', 'type_tools', 'Thyroid'),
+    ('E55', 'type_tools', 'Hyoid'),
+    ('E55', 'type_tools', 'TMJ R'),
+    ('E55', 'type_tools', 'TMJ L');
+
+-- Teeth
+INSERT INTO model.entity (cidoc_class_code, openatlas_class_name, name, description) VALUES
+    ('E55', 'type_tools', 'Permanent teeth'),
+        ('E55', 'type_tools', 'Maxilla'),
+            ('E55', 'type_tools', 'Right side'),
+                ('E55', 'type_tools', 'I1 R (11)'),
+                ('E55', 'type_tools', 'I2 R (12)'),
+                ('E55', 'type_tools', 'C R (13)'),
+                ('E55', 'type_tools', 'PM1 R (14)'),
+                ('E55', 'type_tools', 'PM2 R (15)'),
+                ('E55', 'type_tools', 'M1 R (16)'),
+                ('E55', 'type_tools', 'M2 R (17)'),
+                ('E55', 'type_tools', 'M3 R (18)'),
+            ('E55', 'type_tools', 'Left side'),
+                ('E55', 'type_tools', 'I1 L (21)'),
+                ('E55', 'type_tools', 'I2 L (22)'),
+                ('E55', 'type_tools', 'C L (23)'),
+                ('E55', 'type_tools', 'PM1 L (24)'),
+                ('E55', 'type_tools', 'PM2 L (25)'),
+                ('E55', 'type_tools', 'M1 L (26)'),
+                ('E55', 'type_tools', 'M2 L (27)'),
+                ('E55', 'type_tools', 'M3 L (28)'),
+       ('E55', 'type_tools', 'Mandible'),
+            ('E55', 'type_tools', 'Left side'),
+                ('E55', 'type_tools', 'I1 L (31)'),
+                ('E55', 'type_tools', 'I2 L (32)'),
+                ('E55', 'type_tools', 'C L (33)'),
+                ('E55', 'type_tools', 'PM1 L (34)'),
+                ('E55', 'type_tools', 'PM2 L (35)'),
+                ('E55', 'type_tools', 'M1 L (36)'),
+                ('E55', 'type_tools', 'M2 L (37)'),
+                ('E55', 'type_tools', 'M3 L (38)'),
+            ('E55', 'type_tools', 'Right side'),
+                ('E55', 'type_tools', 'I1 R (41)'),
+                ('E55', 'type_tools', 'I2 R (42)'),
+                ('E55', 'type_tools', 'C R (43)'),
+                ('E55', 'type_tools', 'PM1 R (44)'),
+                ('E55', 'type_tools', 'PM2 R (45)'),
+                ('E55', 'type_tools', 'M1 R (46)'),
+                ('E55', 'type_tools', 'M2 R (47)'),
+                ('E55', 'type_tools', 'M3 R (48)'),
+    ('E55', 'type_tools', 'Deciduous'),
+        ('E55', 'type_tools', 'Maxilla'),
+            ('E55', 'type_tools', 'Right side'),
+                ('E55', 'type_tools', 'I1 R (51)'),
+                ('E55', 'type_tools', 'I2 R (52)'),
+                ('E55', 'type_tools', 'C R (53)'),
+                ('E55', 'type_tools', 'M1 R (54)'),
+                ('E55', 'type_tools', 'M2 R (55)'),
+            ('E55', 'type_tools', 'Left side'),
+                ('E55', 'type_tools', 'I1 L (61)'),
+                ('E55', 'type_tools', 'I2 L (62)'),
+                ('E55', 'type_tools', 'C L (63)'),
+                ('E55', 'type_tools', 'M1 L (64)'),
+                ('E55', 'type_tools', 'M2 L (65)'),
+        ('E55', 'type_tools', 'Mandible'),
+            ('E55', 'type_tools', 'Left side'),
+                ('E55', 'type_tools', 'I1 L (71)'),
+                ('E55', 'type_tools', 'I2 L (72)'),
+                ('E55', 'type_tools', 'C L (73)'),
+                ('E55', 'type_tools', 'M1 L (74)'),
+                ('E55', 'type_tools', 'M2 L (75)'),
+            ('E55', 'type_tools', 'Right side'),
+                ('E55', 'type_tools', 'I1 R (81)'),
+                ('E55', 'type_tools', 'I2 R (82)'),
+                ('E55', 'type_tools', 'C R (83)'),
+                ('E55', 'type_tools', 'M1 R (84)'),
+                ('E55', 'type_tools', 'M2 R (85)');
 
--- Work in progress
-    Frontal
-        Orbit R
-        Orbit L
-    Parietal R
-    Parietal L
-    Temporal R
-        Squama R
-        Petrous R
-        Mastoid R
-    Temporal R
-        Squama L
-        Petrous L
-        Mastoid L
-    Occipital
-        Pars squama
-        Pars lateralis R
-        Pars lateralis L
-        Pars basilaris R
-        Pars basilaris L
-    Sphenoid
-        Ala major R
-        Ala minor R
-        Ala major L
-        Ala minor L
-        Sphenoid body
-    Maxilla R
-    Maxilla L
-    Nasal R
-    Nasal L
-    Lacrimale R
-    Lacrimale L
-    Ethmoid
-    Zygomatic R
-    Zygomatic L
-    Vomer
-    Palate R
-    Palate L
-    Inferior conchae R
-    Inferior conchae L
-    Mandible R
-        Ramus R
-        Condyle R
-    Mandible L
-        Ramus L
-        Condyle L
-    Auditory ossicles
-        Stapes R
-        Incus R
-        Malleus R
-        Stapes L
-        Incus L
-        Malleus L
-    Cricoid cartilage
-    Thyroid
-    Hyoid
-    TMJ R
-    TMJ L
 
 END;