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Add ReverseComplementIndexRead2 option #10

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vedtopkar opened this issue Nov 21, 2015 · 0 comments
Open

Add ReverseComplementIndexRead2 option #10

vedtopkar opened this issue Nov 21, 2015 · 0 comments

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@vedtopkar
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Add ReverseComplementIndexRead2 option to YAML and pipeline to support NextSeq data.

One possible implementation would be to simply write out a reverse complemented index read2 at the demultiplexing stage. After that point, the remainder of the pipeline could run without additional modifications.

(Moved here from aryeelab/guideseq#21)
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@vedtopkar