diff --git a/.buildinfo b/.buildinfo index f45d542b..a59e723e 100644 --- a/.buildinfo +++ b/.buildinfo @@ -1,4 +1,4 @@ # Sphinx build info version 1 -# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done. -config: 1233cb99e85b58fa06be6c4006fa75ff +# This file records the configuration used when building these files. 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themeVersionSelector = "True"; +const themeLanguageSelector = "True"; + +if (themeFlyoutDisplay === "attached") { + function renderLanguages(config) { + if (!config.projects.translations.length) { + return ""; + } + + const languagesHTML = ` +
+
Languages
+ ${config.projects.translations + .map( + (translation) => ` +
+ ${translation.language.code} +
+ `, + ) + .join("\n")} +
+ `; + return languagesHTML; + } + + function renderVersions(config) { + if (!config.versions.active.length) { + return ""; + } + const versionsHTML = ` +
+
Versions
+ ${config.versions.active + .map( + (version) => ` +
+ ${version.slug} +
+ `, + ) + .join("\n")} +
+ `; + return versionsHTML; + } + + function renderDownloads(config) { + if (!Object.keys(config.versions.current.downloads).length) { + return ""; + } + const downloadsNameDisplay = { + pdf: "PDF", + epub: "Epub", + htmlzip: "HTML", + }; + + const downloadsHTML = ` +
+
Downloads
+ ${Object.entries(config.versions.current.downloads) + .map( + ([name, url]) => ` +
+ ${downloadsNameDisplay[name]} +
+ `, + ) + .join("\n")} +
+ `; + return downloadsHTML; + } + + document.addEventListener("readthedocs-addons-data-ready", function (event) { + const config = event.detail.data(); + + const flyout = ` +
+ + Read the Docs + v: ${config.versions.current.slug} + + +
+
+ ${renderLanguages(config)} + ${renderVersions(config)} + ${renderDownloads(config)} +
+
On Read the Docs
+
+ Project Home +
+
+ Builds +
+
+ Downloads +
+
+
+
Search
+
+
+ +
+
+
+
+ + Hosted by Read the Docs + +
+
+ `; + + // Inject the generated flyout into the body HTML element. + document.body.insertAdjacentHTML("beforeend", flyout); + + // Trigger the Read the Docs Addons Search modal when clicking on the "Search docs" input from inside the flyout. + document + .querySelector("#flyout-search-form") + .addEventListener("focusin", () => { + const event = new CustomEvent("readthedocs-search-show"); + document.dispatchEvent(event); + }); + }) +} + +if (themeLanguageSelector || themeVersionSelector) { + function onSelectorSwitch(event) { + const option = event.target.selectedIndex; + const item = event.target.options[option]; + window.location.href = item.dataset.url; + } + + document.addEventListener("readthedocs-addons-data-ready", function (event) { + const config = event.detail.data(); + + const versionSwitch = document.querySelector( + "div.switch-menus > div.version-switch", + ); + if (themeVersionSelector) { + let versions = config.versions.active; + if (config.versions.current.hidden || config.versions.current.type === "external") { + versions.unshift(config.versions.current); + } + const versionSelect = ` + + `; + + versionSwitch.innerHTML = versionSelect; + versionSwitch.firstElementChild.addEventListener("change", onSelectorSwitch); + } + + const languageSwitch = document.querySelector( + "div.switch-menus > div.language-switch", + ); + + if (themeLanguageSelector) { + if (config.projects.translations.length) { + // Add the current language to the options on the selector + let languages = config.projects.translations.concat( + config.projects.current, + ); + languages = languages.sort((a, b) => + a.language.name.localeCompare(b.language.name), + ); + + const languageSelect = ` + + `; + + languageSwitch.innerHTML = languageSelect; + languageSwitch.firstElementChild.addEventListener("change", onSelectorSwitch); + } + else { + languageSwitch.remove(); + } + } + }); +} + +document.addEventListener("readthedocs-addons-data-ready", function (event) { + // Trigger the Read the Docs Addons Search modal when clicking on "Search docs" input from the topnav. + document + .querySelector("[role='search'] input") + .addEventListener("focusin", () => { + const event = new CustomEvent("readthedocs-search-show"); + document.dispatchEvent(event); + }); +}); \ No newline at end of file diff --git a/_static/language_data.js b/_static/language_data.js index 367b8ed8..c7fe6c6f 100644 --- a/_static/language_data.js +++ b/_static/language_data.js @@ -1,13 +1,6 @@ /* - * language_data.js - * ~~~~~~~~~~~~~~~~ - * * This script contains the language-specific data used by searchtools.js, * namely the list of stopwords, stemmer, scorer and splitter. - * - * :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS. - * :license: BSD, see LICENSE for details. - * */ var stopwords = ["a", "and", "are", "as", "at", "be", "but", "by", "for", "if", "in", "into", "is", "it", "near", "no", "not", "of", "on", "or", "such", "that", "the", "their", "then", "there", "these", "they", "this", "to", "was", "will", "with"]; diff --git a/_static/searchtools.js b/_static/searchtools.js index b08d58c9..2c774d17 100644 --- a/_static/searchtools.js +++ b/_static/searchtools.js @@ -1,12 +1,5 @@ /* - * searchtools.js - * ~~~~~~~~~~~~~~~~ - * * Sphinx JavaScript utilities for the full-text search. - * - * :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS. - * :license: BSD, see LICENSE for details. - * */ "use strict"; @@ -20,7 +13,7 @@ if (typeof Scorer === "undefined") { // and returns the new score. /* score: result => { - const [docname, title, anchor, descr, score, filename] = result + const [docname, title, anchor, descr, score, filename, kind] = result return score }, */ @@ -47,6 +40,14 @@ if (typeof Scorer === "undefined") { }; } +// Global search result kind enum, used by themes to style search results. +class SearchResultKind { + static get index() { return "index"; } + static get object() { return "object"; } + static get text() { return "text"; } + static get title() { return "title"; } +} + const _removeChildren = (element) => { while (element && element.lastChild) element.removeChild(element.lastChild); }; @@ -64,9 +65,13 @@ const _displayItem = (item, searchTerms, highlightTerms) => { const showSearchSummary = DOCUMENTATION_OPTIONS.SHOW_SEARCH_SUMMARY; const contentRoot = document.documentElement.dataset.content_root; - const [docName, title, anchor, descr, score, _filename] = item; + const [docName, title, anchor, descr, score, _filename, kind] = item; let listItem = document.createElement("li"); + // Add a class representing the item's type: + // can be used by a theme's CSS selector for styling + // See SearchResultKind for the class names. + listItem.classList.add(`kind-${kind}`); let requestUrl; let linkUrl; if (docBuilder === "dirhtml") { @@ -115,8 +120,10 @@ const _finishSearch = (resultCount) => { "Your search did not match any documents. Please make sure that all words are spelled correctly and that you've selected enough categories." ); else - Search.status.innerText = _( - "Search finished, found ${resultCount} page(s) matching the search query." + Search.status.innerText = Documentation.ngettext( + "Search finished, found one page matching the search query.", + "Search finished, found ${resultCount} pages matching the search query.", + resultCount, ).replace('${resultCount}', resultCount); }; const _displayNextItem = ( @@ -138,7 +145,7 @@ const _displayNextItem = ( else _finishSearch(resultCount); }; // Helper function used by query() to order search results. -// Each input is an array of [docname, title, anchor, descr, score, filename]. +// Each input is an array of [docname, title, anchor, descr, score, filename, kind]. // Order the results by score (in opposite order of appearance, since the // `_displayNextItem` function uses pop() to retrieve items) and then alphabetically. const _orderResultsByScoreThenName = (a, b) => { @@ -248,6 +255,7 @@ const Search = { searchSummary.classList.add("search-summary"); searchSummary.innerText = ""; const searchList = document.createElement("ul"); + searchList.setAttribute("role", "list"); searchList.classList.add("search"); const out = document.getElementById("search-results"); @@ -318,7 +326,7 @@ const Search = { const indexEntries = Search._index.indexentries; // Collect multiple result groups to be sorted separately and then ordered. - // Each is an array of [docname, title, anchor, descr, score, filename]. + // Each is an array of [docname, title, anchor, descr, score, filename, kind]. const normalResults = []; const nonMainIndexResults = []; @@ -337,6 +345,7 @@ const Search = { null, score + boost, filenames[file], + SearchResultKind.title, ]); } } @@ -354,6 +363,7 @@ const Search = { null, score, filenames[file], + SearchResultKind.index, ]; if (isMain) { normalResults.push(result); @@ -475,6 +485,7 @@ const Search = { descr, score, filenames[match[0]], + SearchResultKind.object, ]); }; Object.keys(objects).forEach((prefix) => @@ -585,6 +596,7 @@ const Search = { null, score, filenames[file], + SearchResultKind.text, ]); } return results; diff --git a/api/chains.html b/api/chains.html index 9b55cdac..5e277859 100644 --- a/api/chains.html +++ b/api/chains.html @@ -1,3 +1,5 @@ + + @@ -6,25 +8,21 @@ <no title> — Harmonic 1.2.3 documentation - + - - - - - - - - - - + + + + + + + + @@ -42,9 +40,6 @@ -
- 1.2.3 -
diff --git a/api/evidence.html b/api/evidence.html index 15c7dabc..b2a2cb04 100644 --- a/api/evidence.html +++ b/api/evidence.html @@ -1,3 +1,5 @@ + + @@ -6,27 +8,23 @@ <no title> — Harmonic 1.2.3 documentation - + - - - - - - - - - - - - + + + + + + + + + + @@ -44,9 +42,6 @@ -
- 1.2.3 -
@@ -136,7 +131,7 @@
-add_chains(chains)
+add_chains(chains, num_slices=None)

Add new chains and calculate an estimate of the inverse evidence, its variance, and the variance of the variance.

Calculations are performed by using running averages of the totals for @@ -147,8 +142,13 @@ be considered for each call.

Parameters:
-

chains (Chains) – An instance of the chains class containing the chains to -be used in the calculation.

+
    +
  • chains (Chains) – An instance of the chains class containing the chains to +be used in the calculation.

  • +
  • num_slices (int) – Number of slices into which the samples are divided row-wise +when using flow models to avoid memory issues. If None, the samples are +considered all-together. Defaults to None.

  • +
Raises:
    diff --git a/api/flows.html b/api/flows.html index 5b2b9cf0..8e9a38bb 100644 --- a/api/flows.html +++ b/api/flows.html @@ -1,3 +1,5 @@ + + @@ -6,25 +8,21 @@ <no title> — Harmonic 1.2.3 documentation - + - - - - - - - - - - + + + + + + + + @@ -42,9 +40,6 @@ -
    - 1.2.3 -
    diff --git a/api/index.html b/api/index.html index c13db7fe..5945323f 100644 --- a/api/index.html +++ b/api/index.html @@ -1,3 +1,5 @@ + + @@ -6,28 +8,24 @@ Namespaces — Harmonic 1.2.3 documentation - + - - - - - - - - - - - - - + + + + + + + + + + + @@ -46,9 +44,6 @@ -
    - 1.2.3 -
    @@ -509,7 +504,7 @@

    Namespaces
    -add_chains(chains)
    +add_chains(chains, num_slices=None)

    Add new chains and calculate an estimate of the inverse evidence, its variance, and the variance of the variance.

    Calculations are performed by using running averages of the totals for @@ -520,8 +515,13 @@

    Namespaces
    Parameters:
    -

    chains (Chains) – An instance of the chains class containing the chains to -be used in the calculation.

    +
      +
    • chains (Chains) – An instance of the chains class containing the chains to +be used in the calculation.

    • +
    • num_slices (int) – Number of slices into which the samples are divided row-wise +when using flow models to avoid memory issues. If None, the samples are +considered all-together. Defaults to None.

    • +
    Raises:
      diff --git a/api/logs.html b/api/logs.html index 74aa3def..96145013 100644 --- a/api/logs.html +++ b/api/logs.html @@ -1,3 +1,5 @@ + + @@ -6,25 +8,21 @@ <no title> — Harmonic 1.2.3 documentation - + - - - - - - - - - - + + + + + + + + @@ -42,9 +40,6 @@ -
      - 1.2.3 -
      diff --git a/api/model.html b/api/model.html index 734cd15a..7734c9c0 100644 --- a/api/model.html +++ b/api/model.html @@ -1,3 +1,5 @@ + + @@ -6,25 +8,21 @@ <no title> — Harmonic 1.2.3 documentation - + - - - - - - - - - - + + + + + + + + @@ -42,9 +40,6 @@ -
      - 1.2.3 -
      diff --git a/api/model_legacy.html b/api/model_legacy.html index 1d7551aa..69274a01 100644 --- a/api/model_legacy.html +++ b/api/model_legacy.html @@ -1,3 +1,5 @@ + + @@ -6,25 +8,21 @@ <no title> — Harmonic 1.2.3 documentation - + - - - - - - - - - - + + + + + + + + @@ -42,9 +40,6 @@ -
      - 1.2.3 -
      diff --git a/api/utils.html b/api/utils.html index ac8f74c2..9e0cff0a 100644 --- a/api/utils.html +++ b/api/utils.html @@ -1,3 +1,5 @@ + + @@ -6,25 +8,21 @@ <no title> — Harmonic 1.2.3 documentation - + - - - - - - - - - - + + + + + + + + @@ -42,9 +40,6 @@ -
      - 1.2.3 -
      diff --git a/assets/static_notebooks/basic_usage.html b/assets/static_notebooks/basic_usage.html index bcbd1021..98f1ea35 100644 --- a/assets/static_notebooks/basic_usage.html +++ b/assets/static_notebooks/basic_usage.html @@ -1,3 +1,5 @@ + + @@ -6,25 +8,21 @@ <no title> — Harmonic 1.2.3 documentation - + - - - - - - - - - - + + + + + + + + @@ -42,9 +40,6 @@ -
      - 1.2.3 -
      diff --git a/assets/static_notebooks/checkpointing.html b/assets/static_notebooks/checkpointing.html index 2f334010..39c7a414 100644 --- a/assets/static_notebooks/checkpointing.html +++ b/assets/static_notebooks/checkpointing.html @@ -1,3 +1,5 @@ + + @@ -6,25 +8,21 @@ <no title> — Harmonic 1.2.3 documentation - + - - - - - - - - - - + + + + + + + + @@ -42,9 +40,6 @@ -
      - 1.2.3 -
      diff --git a/background/Bayes_Factors/bayes_factors.html b/background/Bayes_Factors/bayes_factors.html index a057f609..76970c38 100644 --- a/background/Bayes_Factors/bayes_factors.html +++ b/background/Bayes_Factors/bayes_factors.html @@ -1,3 +1,5 @@ + + @@ -6,27 +8,23 @@ Bayes factors — Harmonic 1.2.3 documentation - + - - - - - - - - - - - - + + + + + + + + + + @@ -46,9 +44,6 @@ -
      - 1.2.3 -
      diff --git a/background/Harmonic_Estimator/learnt_harmonic_mean.html b/background/Harmonic_Estimator/learnt_harmonic_mean.html index 7278f2c0..555f7b65 100644 --- a/background/Harmonic_Estimator/learnt_harmonic_mean.html +++ b/background/Harmonic_Estimator/learnt_harmonic_mean.html @@ -1,3 +1,5 @@ + + @@ -6,27 +8,23 @@ Learnt harmonic mean estimator — Harmonic 1.2.3 documentation - + - - - - - - - - - - - - + + + + + + + + + + @@ -46,9 +44,6 @@ -
      - 1.2.3 -
      diff --git a/background/Harmonic_Estimator/original_harmonic_mean.html b/background/Harmonic_Estimator/original_harmonic_mean.html index 00d8b657..c423f305 100644 --- a/background/Harmonic_Estimator/original_harmonic_mean.html +++ b/background/Harmonic_Estimator/original_harmonic_mean.html @@ -1,3 +1,5 @@ + + @@ -6,27 +8,23 @@ Harmonic mean estimator — Harmonic 1.2.3 documentation - + - - - - - - - - - - - - + + + + + + + + + + @@ -46,9 +44,6 @@ -
      - 1.2.3 -
      diff --git a/background/Harmonic_Estimator/retargetd_harmonic_mean.html b/background/Harmonic_Estimator/retargetd_harmonic_mean.html index bf76e8eb..fdf325b1 100644 --- a/background/Harmonic_Estimator/retargetd_harmonic_mean.html +++ b/background/Harmonic_Estimator/retargetd_harmonic_mean.html @@ -1,3 +1,5 @@ + + @@ -6,27 +8,23 @@ Re-targeted harmonic mean estimator — Harmonic 1.2.3 documentation - + - - - - - - - - - - - - + + + + + + + + + + @@ -46,9 +44,6 @@ -
      - 1.2.3 -
      diff --git a/background/Log_space_statistics/log_variance.html b/background/Log_space_statistics/log_variance.html index 24ad281d..e122c74d 100644 --- a/background/Log_space_statistics/log_variance.html +++ b/background/Log_space_statistics/log_variance.html @@ -1,3 +1,5 @@ + + @@ -6,27 +8,23 @@ Log-space variance — Harmonic 1.2.3 documentation - + - - - - - - - - - - - - + + + + + + + + + + @@ -46,9 +44,6 @@ -
      - 1.2.3 -
      diff --git a/background/Machine_Learning/flows.html b/background/Machine_Learning/flows.html index 6d21af08..d2d14c92 100644 --- a/background/Machine_Learning/flows.html +++ b/background/Machine_Learning/flows.html @@ -1,3 +1,5 @@ + + @@ -6,27 +8,23 @@ <no title> — Harmonic 1.2.3 documentation - + - - - - - - - - - - - - + + + + + + + + + + @@ -44,9 +42,6 @@ -
      - 1.2.3 -
      diff --git a/background/Machine_Learning/hypersphere.html b/background/Machine_Learning/hypersphere.html index 545299ed..ac323e1a 100644 --- a/background/Machine_Learning/hypersphere.html +++ b/background/Machine_Learning/hypersphere.html @@ -1,3 +1,5 @@ + + @@ -6,27 +8,23 @@ <no title> — Harmonic 1.2.3 documentation - + - - - - - - - - - - - - + + + + + + + + + + @@ -44,9 +42,6 @@ -
      - 1.2.3 -
      diff --git a/background/Machine_Learning/index.html b/background/Machine_Learning/index.html index 73f2d604..a4bcef3f 100644 --- a/background/Machine_Learning/index.html +++ b/background/Machine_Learning/index.html @@ -1,3 +1,5 @@ + + @@ -6,28 +8,24 @@ Learning a suitable target distribution — Harmonic 1.2.3 documentation - + - - - - - - - - - - - - - + + + + + + + + + + + @@ -47,9 +45,6 @@ -
      - 1.2.3 -
      diff --git a/background/Machine_Learning/kde.html b/background/Machine_Learning/kde.html index 5f0a755c..8e8682ad 100644 --- a/background/Machine_Learning/kde.html +++ b/background/Machine_Learning/kde.html @@ -1,3 +1,5 @@ + + @@ -6,27 +8,23 @@ <no title> — Harmonic 1.2.3 documentation - + - - - - - - - - - - - - + + + + + + + + + + @@ -44,9 +42,6 @@ -
      - 1.2.3 -
      diff --git a/background/Machine_Learning/mgmm.html b/background/Machine_Learning/mgmm.html index ecca6998..49d687b6 100644 --- a/background/Machine_Learning/mgmm.html +++ b/background/Machine_Learning/mgmm.html @@ -1,3 +1,5 @@ + + @@ -6,27 +8,23 @@ <no title> — Harmonic 1.2.3 documentation - + - - - - - - - - - - - - + + + + + + + + + + @@ -44,9 +42,6 @@ -
      - 1.2.3 -
      diff --git a/genindex.html b/genindex.html index 2a1d4dd5..e842eea4 100644 --- a/genindex.html +++ b/genindex.html @@ -1,3 +1,5 @@ + + @@ -5,26 +7,22 @@ Index — Harmonic 1.2.3 documentation - + - - - - - - - - - - - + + + + + + + + + @@ -42,9 +40,6 @@ -
      - 1.2.3 -
      diff --git a/index.html b/index.html index ee077a30..4478fc7b 100644 --- a/index.html +++ b/index.html @@ -1,3 +1,5 @@ + + @@ -6,27 +8,23 @@ Harmonic — Harmonic 1.2.3 documentation - + - - - - - - - - - - - - + + + + + + + + + + @@ -45,9 +43,6 @@ -
      - 1.2.3 -
      diff --git a/py-modindex.html b/py-modindex.html index e96cf79e..605ea5c0 100644 --- a/py-modindex.html +++ b/py-modindex.html @@ -1,3 +1,5 @@ + + @@ -5,26 +7,22 @@ Python Module Index — Harmonic 1.2.3 documentation - + - - - - - - - - - - - + + + + + + + + + @@ -45,9 +43,6 @@ -
      - 1.2.3 -
      diff --git a/search.html b/search.html index e7bda183..5fbbbbe6 100644 --- a/search.html +++ b/search.html @@ -1,3 +1,5 @@ + + @@ -5,7 +7,7 @@ Search — Harmonic 1.2.3 documentation - + @@ -13,19 +15,15 @@ - - - - - - - - - - - + + + + + + + + + @@ -45,9 +43,6 @@ -
      - 1.2.3 -
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